Guide to the Human Genome
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Name: TAGAP Sequence: fasta or formatted (731aa) NCBI GI: 21314774
Description:

T-cell activation Rho GTPase-activating protein isoform b

Referenced in:

Rho and Rac
T cells

Other entries for this name:
alt prot [266aa] T-cell activation Rho GTPase-activating protein isoform c
alt prot [553aa] T-cell activation Rho GTPase-activating protein isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.4         47           2
 C cysteine            1.8         13           1
 D aspartate           6.0         44           2
 E glutamate           7.8         57           2
 F phenylalanine       3.4         25           2
 G glycine             4.8         35           1
 H histidine           2.7         20           2
 I isoleucine          3.4         25           2
 K lysine              5.9         43           2
 L leucine            10.4         76           4
 M methionine          1.9         14           1
 N asparagine          3.6         26           2
 P proline             7.4         54           2
 Q glutamine           4.0         29           1
 R arginine            6.4         47           2
 S serine             12.7         93           4
 T threonine           4.0         29           2
 V valine              6.0         44           2
 W tryptophan          0.5          4           1
 Y tyrosine            0.8          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   T-cell activation Rho GTPase-activating protein isof... 
TAGAP                 0.755   T-cell activation Rho GTPase-activating protein isof...
TAGAP                 0.344   T-cell activation Rho GTPase-activating protein isof...
ARHGAP20              0.114   Rho GTPase activating protein 20 
ARHGAP1               0.057   Rho GTPase activating protein 1 
SH3BP1                0.056   SH3-domain binding protein 1 
ARHGAP17              0.054   nadrin isoform 2 
MYO9A                 0.053   myosin IXA 
ARHGAP17              0.053   nadrin isoform 1 
LOC553158             0.046   PRR5-ARHGAP8 fusion protein 
ARHGAP8               0.046   Rho GTPase activating protein 8 isoform 2 
RICH2                 0.046   Rho GTPase-activating protein RICH2 
ARHGAP8               0.046   Rho GTPase activating protein 8 isoform 1 
ARHGAP6               0.045   Rho GTPase activating protein 6 isoform 4 
ARHGAP6               0.045   Rho GTPase activating protein 6 isoform 1 
GRLF1                 0.041   glucocorticoid receptor DNA binding factor 1 
MYO9B                 0.041   myosin IXB isoform 2 
MYO9B                 0.041   myosin IXB isoform 1 
ARHGAP6               0.039   Rho GTPase activating protein 6 isoform 3 
ARHGAP21              0.039   Rho GTPase activating protein 21 
SRGAP3                0.038   SLIT-ROBO Rho GTPase activating protein 3 isoform a ...
ARHGAP4               0.038   Rho GTPase activating protein 4 
SRGAP2                0.038   SLIT-ROBO Rho GTPase activating protein 2 isoform a...
SRGAP2                0.037   SLIT-ROBO Rho GTPase activating protein 2 isoform b...
ARHGAP15              0.036   ARHGAP15 
ARHGAP27              0.036   Rho GTPase activating protein 27 isoform b 
ARHGAP27              0.036   Rho GTPase activating protein 27 isoform a 
SRGAP3                0.035   SLIT-ROBO Rho GTPase activating protein 3 isoform b ...
SRGAP1                0.035   SLIT-ROBO Rho GTPase activating protein 1 
DLC1                  0.034   deleted in liver cancer 1 isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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