LAT 34221

Name: LAT	Sequence: fasta or formatted (233aa)		NCBI GI: 62739155
Description: linker for activation of T cells isoform b		Referenced in: B cells T cells
Other entries for this name: alt prot [269aa] linker for activation of T cells isoform d alt prot [232aa] linker for activation of T cells isoform c alt prot [262aa] linker for activation of T cells isoform a
Composition: Amino acid Percentage Count Longest homopolymer A alanine 9.9 23 2 C cysteine 1.7 4 1 D aspartate 6.9 16 2 E glutamate 9.9 23 3 F phenylalanine 0.9 2 1 G glycine 5.2 12 2 H histidine 2.6 6 1 I isoleucine 2.6 6 1 K lysine 0.9 2 1 L leucine 9.9 23 4 M methionine 1.7 4 1 N asparagine 3.0 7 1 P proline 12.4 29 2 Q glutamine 2.6 6 1 R arginine 3.9 9 2 S serine 12.0 28 2 T threonine 3.9 9 1 V valine 5.6 13 2 W tryptophan 0.4 1 1 Y tyrosine 4.3 10 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 linker for activation of T cells isoform b LAT 1.000 linker for activation of T cells isoform d LAT 0.985 linker for activation of T cells isoform c LAT 0.965 linker for activation of T cells isoform a NUP214 0.033 nucleoporin 214kDa NOLC1 0.033 nucleolar and coiled-body phosphoprotein 1 TNRC18 0.031 trinucleotide repeat containing 18 SON 0.029 SON DNA-binding protein isoform F SON 0.029 SON DNA-binding protein isoform B POLR2A 0.027 DNA-directed RNA polymerase II A NCL 0.024 nucleolin RP1L1 0.024 retinitis pigmentosa 1-like 1 C6orf132 0.022 PREDICTED: chromosome 6 open reading frame 132 [Hom... C6orf132 0.022 PREDICTED: chromosome 6 open reading frame 132 [Hom... C6orf132 0.022 PREDICTED: hypothetical protein LOC647024 EP300 0.022 E1A binding protein p300 CNTNAP1 0.022 contactin associated protein 1 precursor ELK4 0.022 ELK4 protein isoform a DGKK 0.022 diacylglycerol kinase kappa MLXIPL 0.020 Williams Beuren syndrome chromosome region 14 isofor... MLXIPL 0.020 Williams Beuren syndrome chromosome region 14 isofor... MLXIPL 0.020 Williams Beuren syndrome chromosome region 14 isofor... MLXIPL 0.020 Williams Beuren syndrome chromosome region 14 isofor... KIAA0947 0.020 hypothetical protein LOC23379 LOC100291479 0.020 PREDICTED: hypothetical protein XP_002348186 ELK4 0.020 ELK4 protein isoform b SOHLH1 0.020 spermatogenesis and oogenesis specific basic helix-... C7orf51 0.020 hypothetical protein FLJ37538 DAB1 0.020 disabled homolog 1 MUPCDH 0.020 mucin and cadherin-like isoform 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.