LAT 16244

Name: LAT	Sequence: fasta or formatted (269aa)		NCBI GI: 239049118
Description: linker for activation of T cells isoform d		Referenced in: B cells T cells
Other entries for this name: alt prot [233aa] linker for activation of T cells isoform b alt prot [232aa] linker for activation of T cells isoform c alt prot [262aa] linker for activation of T cells isoform a
Composition: Amino acid Percentage Count Longest homopolymer A alanine 11.5 31 2 C cysteine 1.5 4 1 D aspartate 5.9 16 2 E glutamate 8.9 24 3 F phenylalanine 0.7 2 1 G glycine 5.9 16 2 H histidine 2.2 6 1 I isoleucine 2.2 6 1 K lysine 0.7 2 1 L leucine 10.4 28 4 M methionine 1.9 5 1 N asparagine 2.6 7 1 P proline 12.3 33 2 Q glutamine 3.0 8 1 R arginine 4.5 12 2 S serine 11.5 31 2 T threonine 3.7 10 1 V valine 5.9 16 2 W tryptophan 0.7 2 1 Y tyrosine 3.7 10 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 linker for activation of T cells isoform d LAT 0.868 linker for activation of T cells isoform b LAT 0.854 linker for activation of T cells isoform c LAT 0.837 linker for activation of T cells isoform a NUP214 0.029 nucleoporin 214kDa NOLC1 0.029 nucleolar and coiled-body phosphoprotein 1 TNRC18 0.027 trinucleotide repeat containing 18 SON 0.025 SON DNA-binding protein isoform F SON 0.025 SON DNA-binding protein isoform B RBM42 0.023 RNA binding motif protein 42 POLR2A 0.023 DNA-directed RNA polymerase II A NCL 0.021 nucleolin RP1L1 0.021 retinitis pigmentosa 1-like 1 C6orf132 0.019 PREDICTED: chromosome 6 open reading frame 132 [Hom... C6orf132 0.019 PREDICTED: chromosome 6 open reading frame 132 [Hom... C6orf132 0.019 PREDICTED: hypothetical protein LOC647024 EP300 0.019 E1A binding protein p300 CNTNAP1 0.019 contactin associated protein 1 precursor ELK4 0.019 ELK4 protein isoform a DGKK 0.019 diacylglycerol kinase kappa MLXIPL 0.017 Williams Beuren syndrome chromosome region 14 isofor... MLXIPL 0.017 Williams Beuren syndrome chromosome region 14 isofor... MLXIPL 0.017 Williams Beuren syndrome chromosome region 14 isofor... MLXIPL 0.017 Williams Beuren syndrome chromosome region 14 isofor... KIAA0947 0.017 hypothetical protein LOC23379 LOC100291479 0.017 PREDICTED: hypothetical protein XP_002348186 ELK4 0.017 ELK4 protein isoform b SOHLH1 0.017 spermatogenesis and oogenesis specific basic helix-... C7orf51 0.017 hypothetical protein FLJ37538 DAB1 0.017 disabled homolog 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.