Guide to the Human Genome
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Name: MARCH10 Sequence: fasta or formatted (808aa) NCBI GI: 154937340
Description:

ring finger protein 190

Referenced in:

Ring Finger Proteins

Other entries for this name:
alt mRNA [808aa] ring finger protein 190
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.2         42           2
 C cysteine            1.9         15           1
 D aspartate           5.4         44           2
 E glutamate           8.3         67           3
 F phenylalanine       3.6         29           2
 G glycine             5.3         43           2
 H histidine           2.8         23           2
 I isoleucine          2.0         16           1
 K lysine              5.4         44           2
 L leucine             7.5         61           3
 M methionine          1.9         15           1
 N asparagine          5.2         42           1
 P proline             7.1         57           2
 Q glutamine           6.2         50           2
 R arginine            7.2         58           2
 S serine             13.7        111           5
 T threonine           4.0         32           2
 V valine              4.7         38           2
 W tryptophan          0.9          7           1
 Y tyrosine            1.7         14           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ring finger protein 190 
MARCH10               1.000   ring finger protein 190 
MARCH7                0.092   axotrophin 
MARCH6                0.023   membrane-associated ring finger (C3HC4) 6 
MARCH8                0.023   cellular modulator of immune recognition isoform 7 [...
MARCH8                0.023   cellular modulator of immune recognition isoform 6 [...
MARCH8                0.023   cellular modulator of immune recognition isoform 8 [...
MARCH1                0.022   membrane-associated RING-CH protein I 
MARCH2                0.018   membrane-associated ring finger (C3HC4) 2 isoform 2 ...
MARCH2                0.018   membrane-associated ring finger (C3HC4) 2 isoform 1 ...
MARCH2                0.018   membrane-associated ring finger (C3HC4) 2 isoform 1 ...
MARCH3                0.015   membrane-associated ring finger (C3HC4) 3 
MARCH11               0.012   membrane-associated ring finger (C3HC4) 11 
ZC3H18                0.012   zinc finger CCCH-type containing 18 
FNDC1                 0.012   fibronectin type III domain containing 1 
DSPP                  0.012   dentin sialophosphoprotein preproprotein 
MARCH4                0.012   membrane-associated ring finger (C3HC4) 4 
SRRM2                 0.011   splicing coactivator subunit SRm300 
MYBBP1A               0.011   MYB binding protein 1a isoform 1 
MYBBP1A               0.011   MYB binding protein 1a isoform 2 
LOC100170229          0.009   hypothetical protein LOC100170229 
DMP1                  0.009   dentin matrix acidic phosphoprotein 1 isoform 1 precu...
DMP1                  0.009   dentin matrix acidic phosphoprotein 1 isoform 2 pre...
TCOF1                 0.009   Treacher Collins-Franceschetti syndrome 1 isoform e...
TCOF1                 0.009   Treacher Collins-Franceschetti syndrome 1 isoform d...
TCOF1                 0.009   Treacher Collins-Franceschetti syndrome 1 isoform a ...
TCOF1                 0.009   Treacher Collins-Franceschetti syndrome 1 isoform c ...
MARCH9                0.009   membrane-associated RING-CH protein IX 
SRRM1                 0.009   serine/arginine repetitive matrix 1 
LOC400352             0.009   PREDICTED: similar to Putative golgin subfamily A m...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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