Guide to the Human Genome
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Name: MARCH9 Sequence: fasta or formatted (346aa) NCBI GI: 40255016
Description:

membrane-associated RING-CH protein IX

Referenced in:

Ring Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.4         22           2
 C cysteine            3.8         13           1
 D aspartate           3.8         13           1
 E glutamate           4.0         14           3
 F phenylalanine       2.3          8           1
 G glycine            11.3         39           3
 H histidine           1.2          4           1
 I isoleucine          4.9         17           2
 K lysine              3.5         12           1
 L leucine            10.7         37           2
 M methionine          1.7          6           1
 N asparagine          1.4          5           1
 P proline             8.1         28           3
 Q glutamine           5.2         18           2
 R arginine            8.4         29           1
 S serine              9.2         32           3
 T threonine           4.3         15           2
 V valine              4.6         16           2
 W tryptophan          2.6          9           1
 Y tyrosine            2.6          9           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   membrane-associated RING-CH protein IX 
MARCH4                0.537   membrane-associated ring finger (C3HC4) 4 
MARCH11               0.402   membrane-associated ring finger (C3HC4) 11 
MARCH8                0.067   cellular modulator of immune recognition isoform 7 [...
MARCH8                0.067   cellular modulator of immune recognition isoform 6 [...
MARCH8                0.067   cellular modulator of immune recognition isoform 8 [...
MARCH1                0.065   membrane-associated RING-CH protein I 
MARCH3                0.057   membrane-associated ring finger (C3HC4) 3 
MARCH2                0.047   membrane-associated ring finger (C3HC4) 2 isoform 2 ...
MARCH2                0.047   membrane-associated ring finger (C3HC4) 2 isoform 1 ...
MARCH2                0.047   membrane-associated ring finger (C3HC4) 2 isoform 1 ...
MARCH6                0.034   membrane-associated ring finger (C3HC4) 6 
MARCH5                0.027   membrane-associated ring finger (C3HC4) 5 
DTX3                  0.024   deltex homolog 3 
MARCH7                0.023   axotrophin 
MLL4                  0.022   myeloid/lymphoid or mixed-lineage leukemia 4 
MARCH10               0.020   ring finger protein 190 
MARCH10               0.020   ring finger protein 190 
FAM83H                0.019   FAM83H 
IRS4                  0.017   insulin receptor substrate 4 
RBM15B                0.017   RNA binding motif protein 15B 
KCNH2                 0.017   voltage-gated potassium channel, subfamily H, member...
KCNH2                 0.017   voltage-gated potassium channel, subfamily H, member ...
C6orf132              0.017   PREDICTED: chromosome 6 open reading frame 132 [Hom...
C6orf132              0.017   PREDICTED: chromosome 6 open reading frame 132 [Hom...
C6orf132              0.017   PREDICTED: hypothetical protein LOC647024 
LMTK3                 0.017   lemur tyrosine kinase 3 
ZNF598                0.017   zinc finger protein 598 
LOC65998              0.016   hypothetical protein LOC65998 
NANOS3                0.016   nanos homolog 3 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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