Guide to the Human Genome
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Name: MARCH2 Sequence: fasta or formatted (246aa) NCBI GI: 53729330
Description:

membrane-associated ring finger (C3HC4) 2 isoform 1

Referenced in:

Ring Finger Proteins

Other entries for this name:
alt mRNA [246aa] membrane-associated ring finger (C3HC4) 2 isoform 1
alt prot [176aa] membrane-associated ring finger (C3HC4) 2 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.9         17           2
 C cysteine            6.9         17           2
 D aspartate           3.7          9           1
 E glutamate           6.1         15           2
 F phenylalanine       2.8          7           1
 G glycine             7.3         18           1
 H histidine           3.3          8           1
 I isoleucine          3.3          8           1
 K lysine              4.5         11           2
 L leucine            13.0         32           2
 M methionine          0.8          2           1
 N asparagine          1.2          3           1
 P proline             6.5         16           2
 Q glutamine           2.8          7           1
 R arginine            5.7         14           1
 S serine              7.7         19           3
 T threonine           7.7         19           2
 V valine              5.7         14           2
 W tryptophan          2.0          5           1
 Y tyrosine            2.0          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   membrane-associated ring finger (C3HC4) 2 isoform 1 ... 
MARCH2                1.000   membrane-associated ring finger (C3HC4) 2 isoform 1 ...
MARCH3                0.599   membrane-associated ring finger (C3HC4) 3 
MARCH2                0.492   membrane-associated ring finger (C3HC4) 2 isoform 2 ...
MARCH8                0.133   cellular modulator of immune recognition isoform 7 [...
MARCH8                0.133   cellular modulator of immune recognition isoform 6 [...
MARCH8                0.133   cellular modulator of immune recognition isoform 8 [...
MARCH1                0.121   membrane-associated RING-CH protein I 
MARCH4                0.071   membrane-associated ring finger (C3HC4) 4 
MARCH9                0.067   membrane-associated RING-CH protein IX 
MARCH6                0.065   membrane-associated ring finger (C3HC4) 6 
MARCH11               0.060   membrane-associated ring finger (C3HC4) 11 
MARCH10               0.058   ring finger protein 190 
MARCH10               0.058   ring finger protein 190 
MARCH7                0.050   axotrophin 
RNF160                0.022   zinc finger protein 294 
MARCH5                0.016   membrane-associated ring finger (C3HC4) 5 
RNF150                0.012   ring finger protein 150 
RNF145                0.012   ring finger protein 145 
NOTCH4                0.010   notch4 preproprotein 
RNF214                0.010   ring finger protein 214 
RNF214                0.010   ring finger protein 214 
TREX2                 0.008   three prime repair exonuclease 2 
ING2                  0.008   inhibitor of growth family, member 2 
PRKCQ                 0.008   protein kinase C, theta 
TPP2                  0.008   tripeptidyl peptidase II 
RUFY2                 0.008   RUN and FYVE domain-containing 2 isoform a 
RNF130                0.008   ring finger protein 130 
PAP2D                 0.006   phosphatidic acid phosphatase type 2d isoform 1 [Hom...
PAP2D                 0.006   phosphatidic acid phosphatase type 2d isoform 2 [Hom...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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