Guide to the Human Genome
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Name: MARCH3 Sequence: fasta or formatted (253aa) NCBI GI: 30425370
Description:

membrane-associated ring finger (C3HC4) 3

Referenced in:

Ring Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.0         10           2
 C cysteine            5.1         13           1
 D aspartate           2.8          7           1
 E glutamate           5.1         13           1
 F phenylalanine       4.0         10           1
 G glycine             4.7         12           1
 H histidine           4.0         10           1
 I isoleucine          3.2          8           1
 K lysine              2.8          7           1
 L leucine            12.6         32           2
 M methionine          1.6          4           1
 N asparagine          3.6          9           1
 P proline             5.9         15           1
 Q glutamine           3.6          9           1
 R arginine            7.1         18           2
 S serine              9.9         25           3
 T threonine           7.5         19           2
 V valine              8.7         22           2
 W tryptophan          2.0          5           1
 Y tyrosine            2.0          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   membrane-associated ring finger (C3HC4) 3 
MARCH2                0.592   membrane-associated ring finger (C3HC4) 2 isoform 1 ...
MARCH2                0.592   membrane-associated ring finger (C3HC4) 2 isoform 1 ...
MARCH2                0.273   membrane-associated ring finger (C3HC4) 2 isoform 2 ...
MARCH1                0.118   membrane-associated RING-CH protein I 
MARCH8                0.114   cellular modulator of immune recognition isoform 7 [...
MARCH8                0.114   cellular modulator of immune recognition isoform 6 [...
MARCH8                0.114   cellular modulator of immune recognition isoform 8 [...
MARCH9                0.080   membrane-associated RING-CH protein IX 
MARCH4                0.078   membrane-associated ring finger (C3HC4) 4 
MARCH6                0.076   membrane-associated ring finger (C3HC4) 6 
MARCH11               0.072   membrane-associated ring finger (C3HC4) 11 
MARCH7                0.050   axotrophin 
MARCH10               0.048   ring finger protein 190 
MARCH10               0.048   ring finger protein 190 
RNF43                 0.020   ring finger protein 43 
MARCH5                0.014   membrane-associated ring finger (C3HC4) 5 
LOC100292811          0.012   PREDICTED: similar to proprotein convertase subtili...
LOC100290671          0.012   PREDICTED: hypothetical protein XP_002347099 
LOC100289618          0.012   PREDICTED: hypothetical protein XP_002342982 
RNF150                0.012   ring finger protein 150 
RNF130                0.012   ring finger protein 130 
MAP3K1                0.012   mitogen-activated protein kinase kinase kinase 1 [H...
RNF160                0.012   zinc finger protein 294 
RNF24                 0.012   ring finger protein 24 isoform 2 
RNF24                 0.012   ring finger protein 24 isoform 1 
RNF24                 0.012   ring finger protein 24 isoform 1 
LOC100289702          0.010   PREDICTED: hypothetical protein XP_002347517 
RNF145                0.008   ring finger protein 145 
CNTN2                 0.008   contactin 2 precursor 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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