Guide to the Human Genome
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Name: SLC22A25 Sequence: fasta or formatted (547aa) NCBI GI: 153791484
Description:

putative UST1-like organic anion transporter

Referenced in:

Solute Carrier Families

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.0         44           2
 C cysteine            2.9         16           1
 D aspartate           3.3         18           1
 E glutamate           3.8         21           2
 F phenylalanine       6.0         33           2
 G glycine             5.7         31           2
 H histidine           2.4         13           1
 I isoleucine          7.5         41           2
 K lysine              2.6         14           2
 L leucine            14.8         81           3
 M methionine          3.1         17           2
 N asparagine          4.6         25           2
 P proline             4.2         23           1
 Q glutamine           4.6         25           1
 R arginine            4.8         26           2
 S serine              6.4         35           2
 T threonine           5.5         30           1
 V valine              6.6         36           2
 W tryptophan          2.0         11           1
 Y tyrosine            1.3          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   putative UST1-like organic anion transporter 
SLC22A9               0.714   solute carrier family 22 (organic anion/cation trans...
SLC22A10              0.583   solute carrier family 22, member 10 
SLC22A24              0.560   solute carrier family 22, member 24 
SLC22A12              0.414   urate anion exchanger 1 isoform a 
SLC22A11              0.393   solute carrier family 22 member 11 
SLC22A6               0.321   solute carrier family 22 member 6 isoform b 
SLC22A6               0.321   solute carrier family 22 member 6 isoform a 
SLC22A20              0.308   solute carrier family 22, member 20 
SLC22A8               0.297   solute carrier family 22 member 8 
SLC22A6               0.289   solute carrier family 22 member 6 isoform d 
SLC22A6               0.289   solute carrier family 22 member 6 isoform c 
SLC22A13              0.222   solute carrier family 22 (organic anion transporter...
SLC22A7               0.218   solute carrier family 22 member 7 isoform a 
SLC22A7               0.213   solute carrier family 22 member 7 isoform b 
SLC22A12              0.193   urate anion exchanger 1 isoform b 
LOC100134162          0.156   PREDICTED: similar to solute carrier family 22, mem...
LOC100287736          0.156   PREDICTED: similar to solute carrier family 22, mem...
LOC100287736          0.156   PREDICTED: hypothetical protein XP_002343132 
SLC22A5               0.142   solute carrier family 22 member 5 
SLC22A2               0.138   solute carrier family 22 member 2 
SLC22A3               0.136   solute carrier family 22 member 3 
SLC22A1               0.134   solute carrier family 22 member 1 isoform a 
SLC22A16              0.126   solute carrier family 22, member 16 
SLC22A4               0.118   solute carrier family 22 member 4 
SLC22A14              0.116   organic cation transporter like 4 
SLC22A15              0.110   solute carrier family 22, member 15 
SLC22A1               0.105   solute carrier family 22 member 1 isoform b 
SLC22A17              0.087   solute carrier family 22, member 17 isoform b 
SLC22A17              0.079   solute carrier family 22, member 17 isoform a 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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