Guide to the Human Genome
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Name: SLC22A6 Sequence: fasta or formatted (563aa) NCBI GI: 20070188
Description:

solute carrier family 22 member 6 isoform a

Referenced in:

Kidney
Solute Carrier Families

Other entries for this name:
alt prot [550aa] solute carrier family 22 member 6 isoform b
alt prot [506aa] solute carrier family 22 member 6 isoform c
alt prot [519aa] solute carrier family 22 member 6 isoform d
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.4         53           2
 C cysteine            2.3         13           1
 D aspartate           2.3         13           1
 E glutamate           3.4         19           2
 F phenylalanine       4.6         26           2
 G glycine             8.3         47           2
 H histidine           1.8         10           2
 I isoleucine          4.4         25           1
 K lysine              2.3         13           1
 L leucine            14.0         79           3
 M methionine          3.6         20           1
 N asparagine          3.0         17           1
 P proline             5.3         30           2
 Q glutamine           5.9         33           3
 R arginine            5.3         30           2
 S serine              6.4         36           3
 T threonine           5.7         32           1
 V valine              6.9         39           2
 W tryptophan          1.8         10           1
 Y tyrosine            3.2         18           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   solute carrier family 22 member 6 isoform a 
SLC22A6               0.966   solute carrier family 22 member 6 isoform b 
SLC22A6               0.906   solute carrier family 22 member 6 isoform d 
SLC22A6               0.871   solute carrier family 22 member 6 isoform c 
SLC22A8               0.464   solute carrier family 22 member 8 
SLC22A20              0.431   solute carrier family 22, member 20 
SLC22A12              0.405   urate anion exchanger 1 isoform a 
SLC22A11              0.371   solute carrier family 22 member 11 
SLC22A10              0.355   solute carrier family 22, member 10 
SLC22A24              0.347   solute carrier family 22, member 24 
SLC22A7               0.323   solute carrier family 22 member 7 isoform a 
SLC22A7               0.319   solute carrier family 22 member 7 isoform b 
SLC22A25              0.311   putative UST1-like organic anion transporter 
SLC22A9               0.301   solute carrier family 22 (organic anion/cation trans...
SLC22A13              0.282   solute carrier family 22 (organic anion transporter...
SLC22A12              0.233   urate anion exchanger 1 isoform b 
SLC22A3               0.228   solute carrier family 22 member 3 
SLC22A2               0.214   solute carrier family 22 member 2 
SLC22A1               0.208   solute carrier family 22 member 1 isoform a 
SLC22A5               0.193   solute carrier family 22 member 5 
SLC22A16              0.179   solute carrier family 22, member 16 
SLC22A14              0.177   organic cation transporter like 4 
SLC22A4               0.176   solute carrier family 22 member 4 
SLC22A1               0.167   solute carrier family 22 member 1 isoform b 
SLC22A15              0.166   solute carrier family 22, member 15 
SLC22A23              0.095   solute carrier family 22, member 23 isoform a [Homo...
SVOP                  0.094   SV2 related protein 
SVOPL                 0.093   SVOP-like isoform 1 
SLC22A17              0.089   solute carrier family 22, member 17 isoform b 
LOC146429             0.088   PREDICTED: hypothetical protein LOC146429 isoform 1...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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