Guide to the Human Genome
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Name: SLC22A4 Sequence: fasta or formatted (551aa) NCBI GI: 24497490
Description:

solute carrier family 22 member 4

Referenced in:

Solute Carrier Families

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.7         37           2
 C cysteine            1.3          7           1
 D aspartate           3.3         18           1
 E glutamate           4.5         25           2
 F phenylalanine       7.6         42           2
 G glycine             6.7         37           3
 H histidine           0.5          3           1
 I isoleucine          6.9         38           2
 K lysine              2.4         13           2
 L leucine            13.6         75           3
 M methionine          3.4         19           1
 N asparagine          3.4         19           2
 P proline             4.5         25           1
 Q glutamine           2.7         15           2
 R arginine            5.4         30           2
 S serine              7.1         39           2
 T threonine           5.4         30           2
 V valine              8.5         47           2
 W tryptophan          2.5         14           2
 Y tyrosine            3.3         18           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   solute carrier family 22 member 4 
SLC22A5               0.777   solute carrier family 22 member 5 
SLC22A16              0.257   solute carrier family 22, member 16 
SLC22A2               0.224   solute carrier family 22 member 2 
SLC22A1               0.213   solute carrier family 22 member 1 isoform a 
SLC22A3               0.209   solute carrier family 22 member 3 
SLC22A15              0.208   solute carrier family 22, member 15 
SLC22A7               0.206   solute carrier family 22 member 7 isoform a 
SLC22A13              0.203   solute carrier family 22 (organic anion transporter...
SLC22A7               0.201   solute carrier family 22 member 7 isoform b 
SLC22A8               0.199   solute carrier family 22 member 8 
SLC22A12              0.195   urate anion exchanger 1 isoform a 
SLC22A6               0.183   solute carrier family 22 member 6 isoform b 
SLC22A6               0.181   solute carrier family 22 member 6 isoform a 
SLC22A20              0.181   solute carrier family 22, member 20 
SLC22A1               0.176   solute carrier family 22 member 1 isoform b 
SLC22A11              0.169   solute carrier family 22 member 11 
SLC22A6               0.144   solute carrier family 22 member 6 isoform c 
SLC22A6               0.142   solute carrier family 22 member 6 isoform d 
SLC22A24              0.142   solute carrier family 22, member 24 
SLC22A10              0.138   solute carrier family 22, member 10 
SLC22A14              0.131   organic cation transporter like 4 
SLC22A9               0.124   solute carrier family 22 (organic anion/cation trans...
SLC22A12              0.121   urate anion exchanger 1 isoform b 
SLC22A25              0.117   putative UST1-like organic anion transporter 
LOC146429             0.095   PREDICTED: hypothetical protein LOC146429 isoform 1...
LOC146429             0.092   PREDICTED: hypothetical protein LOC146429 isoform 6...
SLC22A23              0.088   solute carrier family 22, member 23 isoform a [Homo...
SVOPL                 0.087   SVOP-like isoform 1 
LOC146429             0.080   PREDICTED: hypothetical protein LOC146429 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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