Guide to the Human Genome
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Name: SLC22A7 Sequence: fasta or formatted (546aa) NCBI GI: 24497497
Description:

solute carrier family 22 member 7 isoform a

Referenced in:

Kidney
Liver
Solute Carrier Families

Other entries for this name:
alt prot [548aa] solute carrier family 22 member 7 isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.1         55           2
 C cysteine            1.6          9           2
 D aspartate           2.6         14           1
 E glutamate           5.7         31           3
 F phenylalanine       4.6         25           3
 G glycine             8.1         44           2
 H histidine           1.8         10           1
 I isoleucine          1.8         10           2
 K lysine              1.6          9           1
 L leucine            16.8         92           3
 M methionine          1.6          9           1
 N asparagine          1.5          8           1
 P proline             5.1         28           1
 Q glutamine           3.5         19           1
 R arginine            6.2         34           3
 S serine              7.1         39           2
 T threonine           6.4         35           2
 V valine              8.4         46           3
 W tryptophan          2.4         13           2
 Y tyrosine            2.9         16           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   solute carrier family 22 member 7 isoform a 
SLC22A7               0.995   solute carrier family 22 member 7 isoform b 
SLC22A6               0.336   solute carrier family 22 member 6 isoform a 
SLC22A6               0.334   solute carrier family 22 member 6 isoform b 
SLC22A8               0.309   solute carrier family 22 member 8 
SLC22A20              0.303   solute carrier family 22, member 20 
SLC22A6               0.288   solute carrier family 22 member 6 isoform d 
SLC22A6               0.285   solute carrier family 22 member 6 isoform c 
SLC22A12              0.272   urate anion exchanger 1 isoform a 
SLC22A13              0.267   solute carrier family 22 (organic anion transporter...
SLC22A11              0.254   solute carrier family 22 member 11 
SLC22A24              0.250   solute carrier family 22, member 24 
SLC22A10              0.226   solute carrier family 22, member 10 
SLC22A5               0.224   solute carrier family 22 member 5 
SLC22A3               0.220   solute carrier family 22 member 3 
SLC22A25              0.219   putative UST1-like organic anion transporter 
SLC22A9               0.219   solute carrier family 22 (organic anion/cation trans...
SLC22A16              0.218   solute carrier family 22, member 16 
SLC22A4               0.208   solute carrier family 22 member 4 
SLC22A15              0.204   solute carrier family 22, member 15 
SLC22A2               0.197   solute carrier family 22 member 2 
SLC22A1               0.189   solute carrier family 22 member 1 isoform a 
SLC22A14              0.169   organic cation transporter like 4 
SLC22A12              0.162   urate anion exchanger 1 isoform b 
SLC22A1               0.146   solute carrier family 22 member 1 isoform b 
SVOPL                 0.106   SVOP-like isoform 1 
LOC146429             0.105   PREDICTED: hypothetical protein LOC146429 isoform 1...
LOC146429             0.102   PREDICTED: hypothetical protein LOC146429 isoform 6...
SVOP                  0.099   SV2 related protein 
SLC22A17              0.093   solute carrier family 22, member 17 isoform b 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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