Guide to the Human Genome
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Name: SLC22A12 Sequence: fasta or formatted (332aa) NCBI GI: 24497487
Description:

urate anion exchanger 1 isoform b

Referenced in:

PDZ Domain
Solute Carrier Families

Other entries for this name:
alt prot [553aa] urate anion exchanger 1 isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.5         35           2
 C cysteine            1.5          5           1
 D aspartate           2.1          7           1
 E glutamate           2.7          9           2
 F phenylalanine       4.8         16           2
 G glycine            10.2         34           2
 H histidine           1.5          5           1
 I isoleucine          3.0         10           1
 K lysine              1.5          5           2
 L leucine            19.6         65           4
 M methionine          3.0         10           1
 N asparagine          1.8          6           1
 P proline             5.1         17           2
 Q glutamine           3.6         12           1
 R arginine            4.8         16           2
 S serine              5.7         19           2
 T threonine           7.2         24           2
 V valine              7.2         24           2
 W tryptophan          2.7          9           2
 Y tyrosine            1.2          4           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   urate anion exchanger 1 isoform b 
SLC22A12              1.000   urate anion exchanger 1 isoform a 
SLC22A6               0.409   solute carrier family 22 member 6 isoform b 
SLC22A6               0.407   solute carrier family 22 member 6 isoform a 
SLC22A11              0.388   solute carrier family 22 member 11 
SLC22A10              0.375   solute carrier family 22, member 10 
SLC22A8               0.372   solute carrier family 22 member 8 
SLC22A24              0.364   solute carrier family 22, member 24 
SLC22A25              0.326   putative UST1-like organic anion transporter 
SLC22A20              0.325   solute carrier family 22, member 20 
SLC22A6               0.322   solute carrier family 22 member 6 isoform c 
SLC22A6               0.320   solute carrier family 22 member 6 isoform d 
SLC22A9               0.312   solute carrier family 22 (organic anion/cation trans...
SLC22A13              0.293   solute carrier family 22 (organic anion transporter...
SLC22A7               0.271   solute carrier family 22 member 7 isoform b 
SLC22A7               0.271   solute carrier family 22 member 7 isoform a 
SLC22A5               0.233   solute carrier family 22 member 5 
SLC22A3               0.216   solute carrier family 22 member 3 
SLC22A4               0.205   solute carrier family 22 member 4 
SLC22A2               0.191   solute carrier family 22 member 2 
SLC22A1               0.183   solute carrier family 22 member 1 isoform a 
SLC22A15              0.177   solute carrier family 22, member 15 
SLC22A16              0.169   solute carrier family 22, member 16 
SLC22A14              0.145   organic cation transporter like 4 
SLC22A1               0.134   solute carrier family 22 member 1 isoform b 
LOC146429             0.103   PREDICTED: hypothetical protein LOC146429 isoform 1...
LOC146429             0.096   PREDICTED: hypothetical protein LOC146429 isoform 6...
SLC22A17              0.080   solute carrier family 22, member 17 isoform b 
SLC22A17              0.074   solute carrier family 22, member 17 isoform a 
SVOP                  0.071   SV2 related protein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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