Guide to the Human Genome
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Name: SLC22A6 Sequence: fasta or formatted (519aa) NCBI GI: 24497480
Description:

solute carrier family 22 member 6 isoform d

Referenced in:

Kidney
Solute Carrier Families

Other entries for this name:
alt prot [563aa] solute carrier family 22 member 6 isoform a
alt prot [550aa] solute carrier family 22 member 6 isoform b
alt prot [506aa] solute carrier family 22 member 6 isoform c
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.2         48           2
 C cysteine            2.5         13           1
 D aspartate           2.5         13           1
 E glutamate           3.5         18           2
 F phenylalanine       4.8         25           2
 G glycine             8.1         42           2
 H histidine           1.9         10           2
 I isoleucine          4.4         23           1
 K lysine              2.5         13           1
 L leucine            14.6         76           3
 M methionine          2.9         15           1
 N asparagine          3.3         17           1
 P proline             5.0         26           2
 Q glutamine           6.2         32           3
 R arginine            5.6         29           2
 S serine              5.8         30           3
 T threonine           5.6         29           1
 V valine              6.6         34           2
 W tryptophan          1.9         10           1
 Y tyrosine            3.1         16           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   solute carrier family 22 member 6 isoform d 
SLC22A6               0.979   solute carrier family 22 member 6 isoform a 
SLC22A6               0.963   solute carrier family 22 member 6 isoform c 
SLC22A6               0.942   solute carrier family 22 member 6 isoform b 
SLC22A8               0.441   solute carrier family 22 member 8 
SLC22A20              0.423   solute carrier family 22, member 20 
SLC22A12              0.385   urate anion exchanger 1 isoform a 
SLC22A11              0.352   solute carrier family 22 member 11 
SLC22A10              0.341   solute carrier family 22, member 10 
SLC22A24              0.333   solute carrier family 22, member 24 
SLC22A25              0.303   putative UST1-like organic anion transporter 
SLC22A7               0.299   solute carrier family 22 member 7 isoform a 
SLC22A7               0.295   solute carrier family 22 member 7 isoform b 
SLC22A9               0.283   solute carrier family 22 (organic anion/cation trans...
SLC22A13              0.244   solute carrier family 22 (organic anion transporter...
SLC22A3               0.210   solute carrier family 22 member 3 
SLC22A12              0.199   urate anion exchanger 1 isoform b 
SLC22A2               0.189   solute carrier family 22 member 2 
SLC22A1               0.185   solute carrier family 22 member 1 isoform a 
SLC22A1               0.180   solute carrier family 22 member 1 isoform b 
SLC22A5               0.165   solute carrier family 22 member 5 
SLC22A16              0.163   solute carrier family 22, member 16 
SLC22A14              0.162   organic cation transporter like 4 
SLC22A4               0.149   solute carrier family 22 member 4 
SLC22A15              0.134   solute carrier family 22, member 15 
SLC22A23              0.083   solute carrier family 22, member 23 isoform a [Homo...
SLC22A17              0.079   solute carrier family 22, member 17 isoform b 
SVOP                  0.078   SV2 related protein 
SVOPL                 0.075   SVOP-like isoform 1 
LOC146429             0.073   PREDICTED: hypothetical protein LOC146429 isoform 6...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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