Guide to the Human Genome
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Name: SLC22A5 Sequence: fasta or formatted (557aa) NCBI GI: 4507005
Description:

solute carrier family 22 member 5

Referenced in:

PDZ Domain
Solute Carrier Families

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.9         33           2
 C cysteine            1.3          7           1
 D aspartate           3.9         22           2
 E glutamate           3.8         21           2
 F phenylalanine       7.2         40           2
 G glycine             7.0         39           2
 H histidine           1.3          7           1
 I isoleucine          5.9         33           2
 K lysine              2.5         14           2
 L leucine            13.5         75           3
 M methionine          3.9         22           1
 N asparagine          2.5         14           1
 P proline             4.8         27           2
 Q glutamine           2.9         16           2
 R arginine            5.6         31           2
 S serine              7.7         43           2
 T threonine           5.9         33           1
 V valine              8.6         48           2
 W tryptophan          2.2         12           2
 Y tyrosine            3.6         20           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   solute carrier family 22 member 5 
SLC22A4               0.766   solute carrier family 22 member 4 
SLC22A16              0.253   solute carrier family 22, member 16 
SLC22A1               0.230   solute carrier family 22 member 1 isoform a 
SLC22A2               0.229   solute carrier family 22 member 2 
SLC22A3               0.228   solute carrier family 22 member 3 
SLC22A13              0.219   solute carrier family 22 (organic anion transporter...
SLC22A7               0.218   solute carrier family 22 member 7 isoform a 
SLC22A7               0.214   solute carrier family 22 member 7 isoform b 
SLC22A8               0.212   solute carrier family 22 member 8 
SLC22A12              0.205   urate anion exchanger 1 isoform a 
SLC22A6               0.201   solute carrier family 22 member 6 isoform b 
SLC22A20              0.198   solute carrier family 22, member 20 
SLC22A15              0.197   solute carrier family 22, member 15 
SLC22A1               0.195   solute carrier family 22 member 1 isoform b 
SLC22A6               0.195   solute carrier family 22 member 6 isoform a 
SLC22A11              0.182   solute carrier family 22 member 11 
SLC22A6               0.161   solute carrier family 22 member 6 isoform c 
SLC22A10              0.157   solute carrier family 22, member 10 
SLC22A24              0.155   solute carrier family 22, member 24 
SLC22A6               0.155   solute carrier family 22 member 6 isoform d 
SLC22A14              0.144   organic cation transporter like 4 
SLC22A9               0.139   solute carrier family 22 (organic anion/cation trans...
SLC22A25              0.139   putative UST1-like organic anion transporter 
SLC22A12              0.136   urate anion exchanger 1 isoform b 
LOC146429             0.115   PREDICTED: hypothetical protein LOC146429 isoform 1...
LOC146429             0.109   PREDICTED: hypothetical protein LOC146429 isoform 6...
SVOPL                 0.095   SVOP-like isoform 1 
SVOP                  0.094   SV2 related protein 
LOC146429             0.093   PREDICTED: hypothetical protein LOC146429 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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