Guide to the Human Genome
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Name: SLC22A9 Sequence: fasta or formatted (553aa) NCBI GI: 42542386
Description:

solute carrier family 22 (organic anion/cation transporter), member 9

Referenced in:

Solute Carrier Families

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.4         52           2
 C cysteine            2.2         12           1
 D aspartate           3.8         21           1
 E glutamate           4.0         22           2
 F phenylalanine       6.7         37           1
 G glycine             5.4         30           2
 H histidine           2.5         14           1
 I isoleucine          7.1         39           2
 K lysine              3.3         18           3
 L leucine            13.6         75           3
 M methionine          4.3         24           2
 N asparagine          4.2         23           2
 P proline             4.5         25           2
 Q glutamine           3.4         19           1
 R arginine            5.2         29           2
 S serine              5.6         31           2
 T threonine           5.6         31           1
 V valine              5.4         30           2
 W tryptophan          2.2         12           1
 Y tyrosine            1.6          9           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   solute carrier family 22 (organic anion/cation trans... 
SLC22A25              0.703   putative UST1-like organic anion transporter 
SLC22A10              0.558   solute carrier family 22, member 10 
SLC22A24              0.547   solute carrier family 22, member 24 
SLC22A12              0.394   urate anion exchanger 1 isoform a 
SLC22A11              0.367   solute carrier family 22 member 11 
SLC22A6               0.309   solute carrier family 22 member 6 isoform b 
SLC22A8               0.308   solute carrier family 22 member 8 
SLC22A6               0.306   solute carrier family 22 member 6 isoform a 
SLC22A20              0.292   solute carrier family 22, member 20 
SLC22A6               0.268   solute carrier family 22 member 6 isoform c 
SLC22A6               0.266   solute carrier family 22 member 6 isoform d 
SLC22A13              0.219   solute carrier family 22 (organic anion transporter...
SLC22A7               0.214   solute carrier family 22 member 7 isoform a 
SLC22A7               0.210   solute carrier family 22 member 7 isoform b 
SLC22A12              0.182   urate anion exchanger 1 isoform b 
SLC22A2               0.149   solute carrier family 22 member 2 
LOC100134162          0.149   PREDICTED: similar to solute carrier family 22, mem...
LOC100287736          0.149   PREDICTED: similar to solute carrier family 22, mem...
LOC100287736          0.149   PREDICTED: hypothetical protein XP_002343132 
SLC22A5               0.140   solute carrier family 22 member 5 
SLC22A16              0.131   solute carrier family 22, member 16 
SLC22A3               0.129   solute carrier family 22 member 3 
SLC22A1               0.125   solute carrier family 22 member 1 isoform a 
SLC22A4               0.122   solute carrier family 22 member 4 
SLC22A14              0.119   organic cation transporter like 4 
SLC22A15              0.109   solute carrier family 22, member 15 
SLC22A1               0.099   solute carrier family 22 member 1 isoform b 
SLC22A17              0.087   solute carrier family 22, member 17 isoform b 
SLC22A23              0.086   solute carrier family 22, member 23 isoform a [Homo...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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