Guide to the Human Genome
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Name: SLC22A6 Sequence: fasta or formatted (550aa) NCBI GI: 24497476
Description:

solute carrier family 22 member 6 isoform b

Referenced in:

Kidney
Solute Carrier Families

Other entries for this name:
alt prot [563aa] solute carrier family 22 member 6 isoform a
alt prot [506aa] solute carrier family 22 member 6 isoform c
alt prot [519aa] solute carrier family 22 member 6 isoform d
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.3         51           2
 C cysteine            2.4         13           1
 D aspartate           2.4         13           1
 E glutamate           3.3         18           2
 F phenylalanine       4.7         26           2
 G glycine             8.4         46           2
 H histidine           1.8         10           2
 I isoleucine          4.4         24           1
 K lysine              2.2         12           1
 L leucine            14.4         79           3
 M methionine          3.6         20           1
 N asparagine          3.1         17           1
 P proline             5.1         28           2
 Q glutamine           5.8         32           3
 R arginine            5.3         29           2
 S serine              6.5         36           3
 T threonine           5.6         31           1
 V valine              7.1         39           2
 W tryptophan          1.6          9           1
 Y tyrosine            3.1         17           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   solute carrier family 22 member 6 isoform b 
SLC22A6               0.991   solute carrier family 22 member 6 isoform a 
SLC22A6               0.903   solute carrier family 22 member 6 isoform c 
SLC22A6               0.894   solute carrier family 22 member 6 isoform d 
SLC22A8               0.481   solute carrier family 22 member 8 
SLC22A20              0.444   solute carrier family 22, member 20 
SLC22A12              0.417   urate anion exchanger 1 isoform a 
SLC22A11              0.383   solute carrier family 22 member 11 
SLC22A10              0.366   solute carrier family 22, member 10 
SLC22A24              0.360   solute carrier family 22, member 24 
SLC22A7               0.330   solute carrier family 22 member 7 isoform a 
SLC22A7               0.325   solute carrier family 22 member 7 isoform b 
SLC22A25              0.319   putative UST1-like organic anion transporter 
SLC22A9               0.312   solute carrier family 22 (organic anion/cation trans...
SLC22A13              0.288   solute carrier family 22 (organic anion transporter...
SLC22A12              0.240   urate anion exchanger 1 isoform b 
SLC22A3               0.231   solute carrier family 22 member 3 
SLC22A2               0.219   solute carrier family 22 member 2 
SLC22A1               0.214   solute carrier family 22 member 1 isoform a 
SLC22A5               0.203   solute carrier family 22 member 5 
SLC22A16              0.185   solute carrier family 22, member 16 
SLC22A4               0.183   solute carrier family 22 member 4 
SLC22A14              0.183   organic cation transporter like 4 
SLC22A1               0.171   solute carrier family 22 member 1 isoform b 
SLC22A15              0.170   solute carrier family 22, member 15 
SLC22A23              0.099   solute carrier family 22, member 23 isoform a [Homo...
SVOP                  0.097   SV2 related protein 
SVOPL                 0.096   SVOP-like isoform 1 
SLC22A17              0.093   solute carrier family 22, member 17 isoform b 
LOC146429             0.092   PREDICTED: hypothetical protein LOC146429 isoform 1...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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