Guide to the Human Genome
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Name: SLC22A13 Sequence: fasta or formatted (551aa) NCBI GI: 166064021
Description:

solute carrier family 22 (organic anion transporter), member 13

Referenced in:

Solute Carrier Families

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.2         45           3
 C cysteine            2.0         11           1
 D aspartate           2.9         16           1
 E glutamate           4.0         22           1
 F phenylalanine       6.7         37           2
 G glycine             7.6         42           2
 H histidine           2.0         11           2
 I isoleucine          4.9         27           4
 K lysine              2.7         15           1
 L leucine            15.2         84           3
 M methionine          3.1         17           2
 N asparagine          2.5         14           1
 P proline             6.0         33           3
 Q glutamine           4.4         24           1
 R arginine            4.5         25           2
 S serine              5.8         32           2
 T threonine           5.8         32           2
 V valine              7.6         42           3
 W tryptophan          1.6          9           1
 Y tyrosine            2.4         13           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   solute carrier family 22 (organic anion transporter... 
SLC22A14              0.305   organic cation transporter like 4 
SLC22A20              0.299   solute carrier family 22, member 20 
SLC22A6               0.289   solute carrier family 22 member 6 isoform a 
SLC22A6               0.287   solute carrier family 22 member 6 isoform b 
SLC22A8               0.273   solute carrier family 22 member 8 
SLC22A12              0.264   urate anion exchanger 1 isoform a 
SLC22A7               0.263   solute carrier family 22 member 7 isoform a 
SLC22A7               0.261   solute carrier family 22 member 7 isoform b 
SLC22A11              0.241   solute carrier family 22 member 11 
SLC22A24              0.240   solute carrier family 22, member 24 
SLC22A10              0.239   solute carrier family 22, member 10 
SLC22A6               0.231   solute carrier family 22 member 6 isoform d 
SLC22A3               0.230   solute carrier family 22 member 3 
SLC22A6               0.229   solute carrier family 22 member 6 isoform c 
SLC22A1               0.223   solute carrier family 22 member 1 isoform a 
SLC22A5               0.221   solute carrier family 22 member 5 
SLC22A25              0.220   putative UST1-like organic anion transporter 
SLC22A9               0.220   solute carrier family 22 (organic anion/cation trans...
SLC22A2               0.219   solute carrier family 22 member 2 
SLC22A15              0.210   solute carrier family 22, member 15 
SLC22A4               0.202   solute carrier family 22 member 4 
SLC22A16              0.191   solute carrier family 22, member 16 
SLC22A1               0.181   solute carrier family 22 member 1 isoform b 
SLC22A12              0.172   urate anion exchanger 1 isoform b 
SVOP                  0.106   SV2 related protein 
SLC22A17              0.102   solute carrier family 22, member 17 isoform b 
SLC22A17              0.096   solute carrier family 22, member 17 isoform a 
LOC146429             0.089   PREDICTED: hypothetical protein LOC146429 isoform 1...
SVOPL                 0.088   SVOP-like isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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