Guide to the Human Genome
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Name: SLC22A3 Sequence: fasta or formatted (556aa) NCBI GI: 11415038
Description:

solute carrier family 22 member 3

Referenced in:

Solute Carrier Families

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.3         46           3
 C cysteine            3.1         17           1
 D aspartate           2.5         14           2
 E glutamate           4.3         24           3
 F phenylalanine       6.5         36           2
 G glycine             8.8         49           2
 H histidine           0.7          4           1
 I isoleucine          7.0         39           3
 K lysine              2.3         13           2
 L leucine            12.9         72           3
 M methionine          1.6          9           1
 N asparagine          2.7         15           1
 P proline             5.6         31           2
 Q glutamine           2.5         14           1
 R arginine            6.5         36           2
 S serine              5.6         31           2
 T threonine           5.8         32           2
 V valine              8.3         46           3
 W tryptophan          2.2         12           1
 Y tyrosine            2.9         16           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   solute carrier family 22 member 3 
SLC22A2               0.498   solute carrier family 22 member 2 
SLC22A1               0.483   solute carrier family 22 member 1 isoform a 
SLC22A1               0.400   solute carrier family 22 member 1 isoform b 
SLC22A6               0.230   solute carrier family 22 member 6 isoform a 
SLC22A6               0.227   solute carrier family 22 member 6 isoform b 
SLC22A5               0.226   solute carrier family 22 member 5 
SLC22A13              0.226   solute carrier family 22 (organic anion transporter...
SLC22A8               0.225   solute carrier family 22 member 8 
SLC22A20              0.213   solute carrier family 22, member 20 
SLC22A7               0.213   solute carrier family 22 member 7 isoform a 
SLC22A7               0.209   solute carrier family 22 member 7 isoform b 
SLC22A4               0.205   solute carrier family 22 member 4 
SLC22A12              0.197   urate anion exchanger 1 isoform a 
SLC22A6               0.196   solute carrier family 22 member 6 isoform d 
SLC22A16              0.194   solute carrier family 22, member 16 
SLC22A6               0.193   solute carrier family 22 member 6 isoform c 
SLC22A15              0.179   solute carrier family 22, member 15 
SLC22A10              0.174   solute carrier family 22, member 10 
SLC22A24              0.174   solute carrier family 22, member 24 
SLC22A11              0.167   solute carrier family 22 member 11 
SLC22A14              0.161   organic cation transporter like 4 
SLC22A25              0.133   putative UST1-like organic anion transporter 
SLC22A9               0.128   solute carrier family 22 (organic anion/cation trans...
SLC22A12              0.125   urate anion exchanger 1 isoform b 
LOC146429             0.108   PREDICTED: hypothetical protein LOC146429 isoform 6...
SLC22A17              0.107   solute carrier family 22, member 17 isoform b 
LOC146429             0.103   PREDICTED: hypothetical protein LOC146429 isoform 1...
SLC22A17              0.103   solute carrier family 22, member 17 isoform a 
SLC22A23              0.097   solute carrier family 22, member 23 isoform a [Homo...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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