Guide to the Human Genome
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Name: SLC22A12 Sequence: fasta or formatted (553aa) NCBI GI: 24497485
Description:

urate anion exchanger 1 isoform a

Referenced in:

PDZ Domain
Solute Carrier Families

Other entries for this name:
alt prot [332aa] urate anion exchanger 1 isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            11.6         64           3
 C cysteine            2.2         12           1
 D aspartate           2.7         15           1
 E glutamate           2.5         14           2
 F phenylalanine       4.9         27           2
 G glycine             8.5         47           2
 H histidine           1.4          8           1
 I isoleucine          3.3         18           1
 K lysine              1.3          7           2
 L leucine            16.8         93           4
 M methionine          3.6         20           2
 N asparagine          2.2         12           1
 P proline             5.6         31           2
 Q glutamine           4.2         23           1
 R arginine            4.9         27           2
 S serine              6.7         37           2
 T threonine           6.5         36           2
 V valine              6.9         38           2
 W tryptophan          2.9         16           2
 Y tyrosine            1.4          8           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   urate anion exchanger 1 isoform a 
SLC22A12              0.586   urate anion exchanger 1 isoform b 
SLC22A11              0.494   solute carrier family 22 member 11 
SLC22A10              0.446   solute carrier family 22, member 10 
SLC22A24              0.422   solute carrier family 22, member 24 
SLC22A6               0.415   solute carrier family 22 member 6 isoform b 
SLC22A6               0.414   solute carrier family 22 member 6 isoform a 
SLC22A25              0.409   putative UST1-like organic anion transporter 
SLC22A9               0.396   solute carrier family 22 (organic anion/cation trans...
SLC22A8               0.374   solute carrier family 22 member 8 
SLC22A20              0.364   solute carrier family 22, member 20 
SLC22A6               0.364   solute carrier family 22 member 6 isoform c 
SLC22A6               0.363   solute carrier family 22 member 6 isoform d 
SLC22A7               0.267   solute carrier family 22 member 7 isoform a 
SLC22A13              0.263   solute carrier family 22 (organic anion transporter...
SLC22A7               0.262   solute carrier family 22 member 7 isoform b 
SLC22A5               0.206   solute carrier family 22 member 5 
SLC22A3               0.200   solute carrier family 22 member 3 
SLC22A4               0.193   solute carrier family 22 member 4 
SLC22A1               0.184   solute carrier family 22 member 1 isoform a 
SLC22A2               0.183   solute carrier family 22 member 2 
SLC22A16              0.177   solute carrier family 22, member 16 
SLC22A1               0.154   solute carrier family 22 member 1 isoform b 
SLC22A14              0.149   organic cation transporter like 4 
SLC22A15              0.145   solute carrier family 22, member 15 
LOC146429             0.104   PREDICTED: hypothetical protein LOC146429 isoform 1...
LOC146429             0.098   PREDICTED: hypothetical protein LOC146429 isoform 6...
LOC100134162          0.096   PREDICTED: similar to solute carrier family 22, mem...
LOC100287736          0.096   PREDICTED: similar to solute carrier family 22, mem...
LOC100287736          0.096   PREDICTED: hypothetical protein XP_002343132 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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