Guide to the Human Genome
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Name: SLC22A10 Sequence: fasta or formatted (541aa) NCBI GI: 148664184
Description:

solute carrier family 22, member 10

Referenced in:

Solute Carrier Families

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.0         38           3
 C cysteine            2.2         12           1
 D aspartate           3.1         17           1
 E glutamate           3.9         21           2
 F phenylalanine       5.9         32           2
 G glycine             6.3         34           2
 H histidine           2.2         12           1
 I isoleucine          8.5         46           3
 K lysine              3.1         17           2
 L leucine            15.0         81           3
 M methionine          2.4         13           1
 N asparagine          4.1         22           2
 P proline             4.3         23           1
 Q glutamine           3.1         17           1
 R arginine            5.4         29           2
 S serine              6.3         34           2
 T threonine           6.3         34           2
 V valine              7.6         41           2
 W tryptophan          1.8         10           1
 Y tyrosine            1.5          8           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   solute carrier family 22, member 10 
SLC22A24              0.612   solute carrier family 22, member 24 
SLC22A25              0.595   putative UST1-like organic anion transporter 
SLC22A9               0.579   solute carrier family 22 (organic anion/cation trans...
SLC22A12              0.461   urate anion exchanger 1 isoform a 
SLC22A11              0.445   solute carrier family 22 member 11 
SLC22A6               0.376   solute carrier family 22 member 6 isoform b 
SLC22A6               0.374   solute carrier family 22 member 6 isoform a 
SLC22A20              0.353   solute carrier family 22, member 20 
SLC22A8               0.337   solute carrier family 22 member 8 
SLC22A6               0.334   solute carrier family 22 member 6 isoform c 
SLC22A6               0.332   solute carrier family 22 member 6 isoform d 
SLC22A13              0.246   solute carrier family 22 (organic anion transporter...
SLC22A7               0.229   solute carrier family 22 member 7 isoform a 
SLC22A12              0.227   urate anion exchanger 1 isoform b 
SLC22A7               0.224   solute carrier family 22 member 7 isoform b 
SLC22A3               0.182   solute carrier family 22 member 3 
SLC22A2               0.174   solute carrier family 22 member 2 
SLC22A5               0.163   solute carrier family 22 member 5 
SLC22A1               0.161   solute carrier family 22 member 1 isoform a 
LOC100134162          0.156   PREDICTED: similar to solute carrier family 22, mem...
LOC100287736          0.156   PREDICTED: similar to solute carrier family 22, mem...
LOC100287736          0.156   PREDICTED: hypothetical protein XP_002343132 
SLC22A4               0.141   solute carrier family 22 member 4 
SLC22A16              0.139   solute carrier family 22, member 16 
SLC22A1               0.128   solute carrier family 22 member 1 isoform b 
SLC22A14              0.126   organic cation transporter like 4 
SLC22A15              0.121   solute carrier family 22, member 15 
SLC22A23              0.100   solute carrier family 22, member 23 isoform a [Homo...
SLC22A17              0.082   solute carrier family 22, member 17 isoform b 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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