Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: SLC22A16 Sequence: fasta or formatted (577aa) NCBI GI: 31542327
Description:

solute carrier family 22, member 16

Referenced in:

Solute Carrier Families

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.6         38           3
 C cysteine            2.3         13           2
 D aspartate           2.3         13           1
 E glutamate           4.5         26           2
 F phenylalanine       6.2         36           2
 G glycine             7.6         44           2
 H histidine           2.1         12           2
 I isoleucine          4.7         27           1
 K lysine              3.6         21           2
 L leucine            12.3         71           3
 M methionine          2.8         16           1
 N asparagine          3.5         20           2
 P proline             2.9         17           2
 Q glutamine           2.6         15           1
 R arginine            4.0         23           2
 S serine              9.2         53           3
 T threonine           6.4         37           2
 V valine              9.0         52           2
 W tryptophan          2.9         17           2
 Y tyrosine            4.5         26           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   solute carrier family 22, member 16 
SLC22A4               0.241   solute carrier family 22 member 4 
SLC22A5               0.241   solute carrier family 22 member 5 
SLC22A7               0.202   solute carrier family 22 member 7 isoform a 
SLC22A7               0.199   solute carrier family 22 member 7 isoform b 
SLC22A1               0.190   solute carrier family 22 member 1 isoform a 
SLC22A2               0.187   solute carrier family 22 member 2 
SLC22A3               0.186   solute carrier family 22 member 3 
SLC22A13              0.180   solute carrier family 22 (organic anion transporter...
SLC22A15              0.176   solute carrier family 22, member 15 
SLC22A8               0.175   solute carrier family 22 member 8 
SLC22A6               0.173   solute carrier family 22 member 6 isoform b 
SLC22A6               0.173   solute carrier family 22 member 6 isoform a 
SLC22A20              0.169   solute carrier family 22, member 20 
SLC22A12              0.167   urate anion exchanger 1 isoform a 
SLC22A1               0.153   solute carrier family 22 member 1 isoform b 
SLC22A6               0.146   solute carrier family 22 member 6 isoform d 
SLC22A6               0.146   solute carrier family 22 member 6 isoform c 
SLC22A24              0.145   solute carrier family 22, member 24 
SLC22A10              0.127   solute carrier family 22, member 10 
SLC22A14              0.126   organic cation transporter like 4 
SLC22A9               0.125   solute carrier family 22 (organic anion/cation trans...
SLC22A11              0.122   solute carrier family 22 member 11 
SLC22A25              0.118   putative UST1-like organic anion transporter 
SLC22A12              0.093   urate anion exchanger 1 isoform b 
LOC146429             0.072   PREDICTED: hypothetical protein LOC146429 isoform 1...
LOC146429             0.069   PREDICTED: hypothetical protein LOC146429 isoform 6...
SVOPL                 0.069   SVOP-like isoform 1 
SLC22A17              0.068   solute carrier family 22, member 17 isoform b 
SVOP                  0.066   SV2 related protein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press