AMIGO1 5345

Name: AMIGO1	Sequence: fasta or formatted (493aa)		NCBI GI: 153791466
Description: AMIGO protein		Referenced in: Leucine-rich Repeat Family
Composition: Amino acid Percentage Count Longest homopolymer A alanine 4.5 22 2 C cysteine 3.0 15 1 D aspartate 5.5 27 2 E glutamate 4.5 22 1 F phenylalanine 3.4 17 1 G glycine 5.3 26 2 H histidine 3.7 18 2 I isoleucine 2.0 10 2 K lysine 4.5 22 2 L leucine 16.0 79 3 M methionine 2.0 10 1 N asparagine 5.9 29 2 P proline 5.7 28 1 Q glutamine 4.7 23 2 R arginine 4.1 20 2 S serine 9.1 45 3 T threonine 5.3 26 2 V valine 6.7 33 2 W tryptophan 1.4 7 1 Y tyrosine 2.8 14 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 AMIGO protein AMIGO2 0.328 adhesion molecule with Ig-like domain 2 AMIGO2 0.328 adhesion molecule with Ig-like domain 2 AMIGO3 0.255 adhesion molecule with Ig-like domain 3 LRFN5 0.081 leucine rich repeat and fibronectin type III domain ... PXDNL 0.079 peroxidasin homolog-like PXDN 0.076 peroxidasin LRRC24 0.075 leucine rich repeat containing 24 LGR4 0.072 leucine-rich repeat-containing G protein-coupled re... SLIT3 0.071 slit homolog 3 LRRN1 0.069 leucine rich repeat neuronal 1 LRRC4B 0.069 leucine rich repeat containing 4B SLIT2 0.065 slit homolog 2 IGSF10 0.065 immunoglobulin superfamily, member 10 LGR6 0.065 leucine-rich repeat-containing G protein-coupled rec... LINGO4 0.064 leucine rich repeat and Ig domain containing 4 [Homo... LRIG3 0.064 leucine-rich repeats and immunoglobulin-like domains... SLIT1 0.063 slit homolog 1 LRRC4 0.063 leucine rich repeat containing 4 LGR5 0.062 leucine-rich repeat-containing G protein-coupled rece... VASN 0.061 slit-like 2 LRRN3 0.060 leucine rich repeat neuronal 3 LRRN3 0.060 leucine rich repeat neuronal 3 LRRN3 0.060 leucine rich repeat neuronal 3 LRFN3 0.060 leucine rich repeat and fibronectin type III domain ... LRIG1 0.057 leucine-rich repeats and immunoglobulin-like domains... MXRA5 0.057 adlican TPBG 0.056 trophoblast glycoprotein LOC441617 0.055 PREDICTED: similar to hCG1820409 LOC441617 0.055 PREDICTED: similar to hCG1820409 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.