TPBG 33318

Name: TPBG	Sequence: fasta or formatted (420aa)		NCBI GI: 5729718
Description: trophoblast glycoprotein		Referenced in: Leucine-rich Repeat Family
Composition: Amino acid Percentage Count Longest homopolymer A alanine 9.8 41 2 C cysteine 2.4 10 1 D aspartate 5.0 21 1 E glutamate 4.8 20 1 F phenylalanine 3.1 13 1 G glycine 5.0 21 2 H histidine 3.1 13 1 I isoleucine 2.4 10 1 K lysine 1.9 8 2 L leucine 16.9 71 2 M methionine 1.7 7 1 N asparagine 5.7 24 2 P proline 6.9 29 2 Q glutamine 2.4 10 1 R arginine 6.9 29 2 S serine 9.3 39 4 T threonine 3.1 13 1 V valine 6.7 28 2 W tryptophan 1.0 4 1 Y tyrosine 2.1 9 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 trophoblast glycoprotein LOC441617 0.221 PREDICTED: similar to hCG1820409 LOC441617 0.221 PREDICTED: similar to hCG1820409 LOC441617 0.141 PREDICTED: similar to hCG1820409 RTN4RL2 0.114 reticulon 4 receptor-like 2 LRRC4 0.106 leucine rich repeat containing 4 LRRC4B 0.101 leucine rich repeat containing 4B CHADL 0.098 chondroadherin-like LRRC24 0.093 leucine rich repeat containing 24 LRTM2 0.092 leucine-rich repeats and transmembrane domains 2 [Ho... LINGO3 0.091 leucine rich repeat and Ig domain containing 3 [Hom... LRRC4C 0.090 netrin-G1 ligand RTN4RL1 0.088 reticulon 4 receptor-like 1 LRRC70 0.086 synleurin ISLR 0.083 immunoglobulin superfamily containing leucine-rich r... ISLR 0.083 immunoglobulin superfamily containing leucine-rich re... IGFALS 0.082 insulin-like growth factor binding protein, acid la... IGFALS 0.082 insulin-like growth factor binding protein, acid labi... KIAA0644 0.080 hypothetical protein LOC9865 LGR4 0.079 leucine-rich repeat-containing G protein-coupled re... GP1BA 0.079 platelet glycoprotein Ib alpha polypeptide precurso... SLIT3 0.079 slit homolog 3 GP5 0.076 glycoprotein V (platelet) CPN2 0.076 carboxypeptidase N, polypeptide 2, 83kD VASN 0.075 slit-like 2 SLIT1 0.074 slit homolog 1 FLRT2 0.074 fibronectin leucine rich transmembrane protein 2 [Hom... NYX 0.071 nyctalopin precursor LINGO4 0.071 leucine rich repeat and Ig domain containing 4 [Homo... SLIT2 0.070 slit homolog 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.