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Search of human proteins with 153070256
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|153070256 MAGI family member, X-linked isoform d [Homo
sapiens]
(253 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|153070256 MAGI family member, X-linked isoform d [Homo sapiens] 504 e-143
gi|153070252 MAGI family member, X-linked isoform c [Homo sapiens] 498 e-141
gi|153070254 MAGI family member, X-linked isoform b [Homo sapiens] 337 6e-93
gi|153070258 MAGI family member, X-linked isoform a [Homo sapiens] 323 1e-88
gi|27436957 membrane associated guanylate kinase, WW and PDZ dom... 53 3e-07
gi|74272284 membrane associated guanylate kinase, WW and PDZ dom... 50 1e-06
gi|218505835 membrane-associated guanylate kinase-related 3 iso... 50 2e-06
gi|155969695 membrane-associated guanylate kinase-related 3 iso... 50 2e-06
gi|38327612 PDZ and LIM domain 2 isoform 3 [Homo sapiens] 49 5e-06
gi|28866957 PDZ and LIM domain 2 isoform 1 [Homo sapiens] 49 5e-06
gi|21361888 PDZ and LIM domain 2 isoform 2 [Homo sapiens] 49 5e-06
gi|197383077 PDZ and LIM domain 5 isoform a [Homo sapiens] 46 3e-05
gi|42741675 PDZ and LIM domain 7 isoform 2 [Homo sapiens] 46 3e-05
gi|112363080 microtubule associated serine/threonine kinase 2 [H... 44 1e-04
gi|116256464 hypothetical protein LOC343990 [Homo sapiens] 44 1e-04
gi|66730423 hypothetical protein LOC389384 [Homo sapiens] 43 2e-04
gi|66346708 membrane associated guanylate kinase, WW and PDZ dom... 42 5e-04
gi|74272282 membrane associated guanylate kinase, WW and PDZ dom... 42 5e-04
gi|18375650 protein tyrosine phosphatase, non-receptor type 13 i... 42 7e-04
gi|18375648 protein tyrosine phosphatase, non-receptor type 13 i... 42 7e-04
gi|18375646 protein tyrosine phosphatase, non-receptor type 13 i... 42 7e-04
gi|5453992 protein tyrosine phosphatase, non-receptor type 13 is... 42 7e-04
gi|148277064 cut-like homeobox 1 isoform a [Homo sapiens] 41 0.001
gi|19924103 synapsin II isoform IIa [Homo sapiens] 40 0.001
gi|4507137 acidic alpha 1 syntrophin [Homo sapiens] 40 0.001
gi|47157328 PDZ and LIM domain 7 isoform 4 [Homo sapiens] 40 0.001
gi|11496885 PDZ and LIM domain 7 isoform 1 [Homo sapiens] 40 0.001
gi|240255430 hypothetical protein LOC100289135 [Homo sapiens] 40 0.002
gi|239754604 PREDICTED: similar to hCG1802898 [Homo sapiens] 40 0.002
gi|239749150 PREDICTED: hypothetical protein XP_002346928 [Homo ... 40 0.002
>gi|153070256 MAGI family member, X-linked isoform d [Homo sapiens]
Length = 253
Score = 504 bits (1297), Expect = e-143
Identities = 253/253 (100%), Positives = 253/253 (100%)
Query: 1 MEPRTGGAANPKGSRGSRGPSPLAGPSARQLLARLDARPLAARAAVDVAALVRRAGATLR 60
MEPRTGGAANPKGSRGSRGPSPLAGPSARQLLARLDARPLAARAAVDVAALVRRAGATLR
Sbjct: 1 MEPRTGGAANPKGSRGSRGPSPLAGPSARQLLARLDARPLAARAAVDVAALVRRAGATLR 60
Query: 61 LRRKEAVSVLDSADIEVTDSRLPHATIVDHRPQVGDLVLHINGESTQGLTHAQAVERIRA 120
LRRKEAVSVLDSADIEVTDSRLPHATIVDHRPQVGDLVLHINGESTQGLTHAQAVERIRA
Sbjct: 61 LRRKEAVSVLDSADIEVTDSRLPHATIVDHRPQVGDLVLHINGESTQGLTHAQAVERIRA 120
Query: 121 GGPQLHLVIRRPLETHPGKPRGVGEPRKGVDRSPDPGGPEVTGSRSSSTSLVQHPPSRTT 180
GGPQLHLVIRRPLETHPGKPRGVGEPRKGVDRSPDPGGPEVTGSRSSSTSLVQHPPSRTT
Sbjct: 121 GGPQLHLVIRRPLETHPGKPRGVGEPRKGVDRSPDPGGPEVTGSRSSSTSLVQHPPSRTT 180
Query: 181 LKKTRGSPEPSPEAAADGPTVSPPERRAEDPNDQIPGSPGPWLVPSEERLSRALGVRGAA 240
LKKTRGSPEPSPEAAADGPTVSPPERRAEDPNDQIPGSPGPWLVPSEERLSRALGVRGAA
Sbjct: 181 LKKTRGSPEPSPEAAADGPTVSPPERRAEDPNDQIPGSPGPWLVPSEERLSRALGVRGAA 240
Query: 241 QLAQEMAAGRRRH 253
QLAQEMAAGRRRH
Sbjct: 241 QLAQEMAAGRRRH 253
>gi|153070252 MAGI family member, X-linked isoform c [Homo sapiens]
Length = 258
Score = 498 bits (1281), Expect = e-141
Identities = 253/258 (98%), Positives = 253/258 (98%), Gaps = 5/258 (1%)
Query: 1 MEPRTGGAANPKGSRGSRGPSPLAGPSARQLLARLDARPLAARAAVDVAALVRRAGATLR 60
MEPRTGGAANPKGSRGSRGPSPLAGPSARQLLARLDARPLAARAAVDVAALVRRAGATLR
Sbjct: 1 MEPRTGGAANPKGSRGSRGPSPLAGPSARQLLARLDARPLAARAAVDVAALVRRAGATLR 60
Query: 61 LRRKEAVSVLDSADIEVTDSRLPHATIVDHRPQVGDLVLHINGESTQGLTHAQAVERIRA 120
LRRKEAVSVLDSADIEVTDSRLPHATIVDHRPQVGDLVLHINGESTQGLTHAQAVERIRA
Sbjct: 61 LRRKEAVSVLDSADIEVTDSRLPHATIVDHRPQVGDLVLHINGESTQGLTHAQAVERIRA 120
Query: 121 GGPQLHLVIRRPLETHPGKPRGVGEPRKGV-----DRSPDPGGPEVTGSRSSSTSLVQHP 175
GGPQLHLVIRRPLETHPGKPRGVGEPRKGV DRSPDPGGPEVTGSRSSSTSLVQHP
Sbjct: 121 GGPQLHLVIRRPLETHPGKPRGVGEPRKGVVPSWPDRSPDPGGPEVTGSRSSSTSLVQHP 180
Query: 176 PSRTTLKKTRGSPEPSPEAAADGPTVSPPERRAEDPNDQIPGSPGPWLVPSEERLSRALG 235
PSRTTLKKTRGSPEPSPEAAADGPTVSPPERRAEDPNDQIPGSPGPWLVPSEERLSRALG
Sbjct: 181 PSRTTLKKTRGSPEPSPEAAADGPTVSPPERRAEDPNDQIPGSPGPWLVPSEERLSRALG 240
Query: 236 VRGAAQLAQEMAAGRRRH 253
VRGAAQLAQEMAAGRRRH
Sbjct: 241 VRGAAQLAQEMAAGRRRH 258
>gi|153070254 MAGI family member, X-linked isoform b [Homo sapiens]
Length = 262
Score = 337 bits (864), Expect = 6e-93
Identities = 182/249 (73%), Positives = 183/249 (73%), Gaps = 61/249 (24%)
Query: 66 AVSVLDSADIEVTDSRLPHATIVDHRPQ-------------------------------- 93
AVSVLDSADIEVTDSRLPHATIVDHRPQ
Sbjct: 14 AVSVLDSADIEVTDSRLPHATIVDHRPQGKARSAPKPSQASGHFSVELVRGYAGFGLTLG 73
Query: 94 -----VGDLVLHING------------------------ESTQGLTHAQAVERIRAGGPQ 124
GD L + G ESTQGLTHAQAVERIRAGGPQ
Sbjct: 74 GGRDVAGDTPLAVRGLLKDGPAQRCGRLEVGDLVLHINGESTQGLTHAQAVERIRAGGPQ 133
Query: 125 LHLVIRRPLETHPGKPRGVGEPRKGVDRSPDPGGPEVTGSRSSSTSLVQHPPSRTTLKKT 184
LHLVIRRPLETHPGKPRGVGEPRKGVDRSPDPGGPEVTGSRSSSTSLVQHPPSRTTLKKT
Sbjct: 134 LHLVIRRPLETHPGKPRGVGEPRKGVDRSPDPGGPEVTGSRSSSTSLVQHPPSRTTLKKT 193
Query: 185 RGSPEPSPEAAADGPTVSPPERRAEDPNDQIPGSPGPWLVPSEERLSRALGVRGAAQLAQ 244
RGSPEPSPEAAADGPTVSPPERRAEDPNDQIPGSPGPWLVPSEERLSRALGVRGAAQLAQ
Sbjct: 194 RGSPEPSPEAAADGPTVSPPERRAEDPNDQIPGSPGPWLVPSEERLSRALGVRGAAQLAQ 253
Query: 245 EMAAGRRRH 253
EMAAGRRRH
Sbjct: 254 EMAAGRRRH 262
>gi|153070258 MAGI family member, X-linked isoform a [Homo sapiens]
Length = 334
Score = 323 bits (827), Expect = 1e-88
Identities = 161/168 (95%), Positives = 162/168 (96%), Gaps = 5/168 (2%)
Query: 91 RPQVGDLVLHINGESTQGLTHAQAVERIRAGGPQLHLVIRRPLETHPGKPRGVGEPRKGV 150
R +VGDLVLHINGESTQGLTHAQAVERIRAGGPQLHLVIRRPLETHPGKPRGVGEPRKGV
Sbjct: 167 RLEVGDLVLHINGESTQGLTHAQAVERIRAGGPQLHLVIRRPLETHPGKPRGVGEPRKGV 226
Query: 151 -----DRSPDPGGPEVTGSRSSSTSLVQHPPSRTTLKKTRGSPEPSPEAAADGPTVSPPE 205
DRSPDPGGPEVTGSRSSSTSLVQHPPSRTTLKKTRGSPEPSPEAAADGPTVSPPE
Sbjct: 227 VPSWPDRSPDPGGPEVTGSRSSSTSLVQHPPSRTTLKKTRGSPEPSPEAAADGPTVSPPE 286
Query: 206 RRAEDPNDQIPGSPGPWLVPSEERLSRALGVRGAAQLAQEMAAGRRRH 253
RRAEDPNDQIPGSPGPWLVPSEERLSRALGVRGAAQLAQEMAAGRRRH
Sbjct: 287 RRAEDPNDQIPGSPGPWLVPSEERLSRALGVRGAAQLAQEMAAGRRRH 334
>gi|27436957 membrane associated guanylate kinase, WW and PDZ domain
containing 2 [Homo sapiens]
Length = 1455
Score = 52.8 bits (125), Expect = 3e-07
Identities = 48/165 (29%), Positives = 71/165 (43%), Gaps = 38/165 (23%)
Query: 91 RPQVGDLVLHINGESTQGLTHAQAVERIRAGGPQLHLVIRRPLETHP--GKPRGVGEPRK 148
R +VGD ++ INGEST+ +THA+A+E I++GG ++ L+++R P +P P
Sbjct: 1187 RMRVGDQIIEINGESTRDMTHARAIELIKSGGRRVRLLLKRGTGQVPEYDEPAPWSSPAA 1246
Query: 149 GVDRSPDPGGPEVTGSRSSSTSLVQHPPSRTTLKKTRGSPEPSPEAAADGPTVSPPERRA 208
PG PEV S L PS P+P +
Sbjct: 1247 AA-----PGLPEV--GVSLDDGLAPFSPS-----------HPAPPS-------------- 1274
Query: 209 EDPNDQIPGSPGP-WLVPSEERLSRALGVRGAAQLAQEMAAGRRR 252
DP+ QI SPGP W + E + + + Q Q + R R
Sbjct: 1275 -DPSHQI--SPGPTWDIKREHDVRKPKELSACGQKKQRLGEQRER 1316
Score = 34.3 bits (77), Expect = 0.11
Identities = 23/85 (27%), Positives = 42/85 (49%), Gaps = 7/85 (8%)
Query: 95 GDLVLHINGESTQGLTHAQAVERIR--AGGPQLHLVIRRPLETHPGKPRGVGEPRKGVDR 152
GDL++ IN ++ Q L+H + V+ ++ G + L+I R P K P+ +DR
Sbjct: 643 GDLIVEINQQNVQNLSHTEVVDILKDCPIGSETSLIIHRGGFFSPWK-----TPKPIMDR 697
Query: 153 SPDPGGPEVTGSRSSSTSLVQHPPS 177
+ G P+ + S + + PP+
Sbjct: 698 WENQGSPQTSLSAPAIPQNLPFPPA 722
Score = 30.8 bits (68), Expect = 1.2
Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 4/72 (5%)
Query: 89 DHRPQVGDLVLHINGESTQGLTHAQAVERIRAG--GPQLHLVIRR--PLETHPGKPRGVG 144
D + + GD++++IN G THA V+ ++ G ++LV+ R PL P P
Sbjct: 464 DGKMETGDVIVYINEVCVLGHTHADVVKLFQSVPIGQSVNLVLCRGYPLPFDPEDPANSM 523
Query: 145 EPRKGVDRSPDP 156
P + P P
Sbjct: 524 VPPLAIMERPPP 535
Score = 29.3 bits (64), Expect = 3.4
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 9/57 (15%)
Query: 82 LPH--ATIVDHRP-------QVGDLVLHINGESTQGLTHAQAVERIRAGGPQLHLVI 129
+PH I+D P +VGD +L +NG+S + HA V+ I+ G + L I
Sbjct: 950 VPHKIGRIIDGSPADRCAKLKVGDRILAVNGQSIINMPHADIVKLIKDAGLSVTLRI 1006
>gi|74272284 membrane associated guanylate kinase, WW and PDZ domain
containing 1 isoform c [Homo sapiens]
Length = 1462
Score = 50.4 bits (119), Expect = 1e-06
Identities = 47/164 (28%), Positives = 70/164 (42%), Gaps = 47/164 (28%)
Query: 93 QVGDLVLHINGESTQGLTHAQAVERIRAGGPQLHLVIRR---------PLETHPGK---P 140
++GD +L INGE+T+ + H++A+E I+ GG ++ L ++R P G P
Sbjct: 1165 RIGDEILEINGETTKNMKHSRAIELIKNGGRRVRLFLKRGDGSVPEYDPSSDRHGPATGP 1224
Query: 141 RGVGEPRKGVDRSPDPG---------------------GPEVTGSRSSSTSLVQHPP-SR 178
+GV E R G DR P + GSR S +H +
Sbjct: 1225 QGVPEVRAGPDRRQHPSLESSYPPDLHKSSPHGEKRAHARDPKGSREYSRQPNEHHTWNG 1284
Query: 179 TTLKKTRGSPEP---SPE----------AAADGPTVSPPERRAE 209
T+ K G+ P +PE AAA+GP PE+R E
Sbjct: 1285 TSRKPDSGACRPKDRAPEGRRDAQAERAAAANGPKRRSPEKRRE 1328
Score = 32.7 bits (73), Expect = 0.31
Identities = 37/138 (26%), Positives = 60/138 (43%), Gaps = 24/138 (17%)
Query: 95 GDLVLHINGESTQGLTHAQAVERI--RAGGPQLHLVIRRPLETHPGKPRGVGEPRKGVDR 152
GDL++ +N ++ Q LTH Q V+ + G ++ L+++R G+ P+K
Sbjct: 683 GDLIVEVNKKNVQALTHNQVVDMLVECPKGSEVTLLVQR---------GGLPVPKK---- 729
Query: 153 SPDPGGPEVTGSRSSSTSLVQHPPSRTTLKKTRGSPEPSPEAAADGPTVSPPERRAEDPN 212
SP E S++SS V S T SP S + + P P E +A D
Sbjct: 730 SPKSQPLERKDSQNSSQHSVSSHRSLHT-----ASPSHSTQVLPEFP---PAEAQAPDQT 781
Query: 213 DQI-PGSPGPWLVPSEER 229
D P P+ + ++ R
Sbjct: 782 DSSGQKKPDPFKIWAQSR 799
Score = 29.3 bits (64), Expect = 3.4
Identities = 22/102 (21%), Positives = 39/102 (38%), Gaps = 20/102 (19%)
Query: 93 QVGDLVLHINGESTQGLTHAQAVERIRAGGPQLHLVIRRPLETHPGKPRGVGEPRKGVDR 152
+VGD +L +NG S +H+ V I+ G + L I +
Sbjct: 1025 KVGDRILAVNGCSITNKSHSDIVNLIKEAGNTVTLRI--------------------IPG 1064
Query: 153 SPDPGGPEVTGSRSSSTSLVQHPPSRTTLKKTRGSPEPSPEA 194
+T + +T H PS+ ++TR + +P E+
Sbjct: 1065 DESSNATLLTNAEKIATITTTHTPSQQGTQETRNTTKPKQES 1106
>gi|218505835 membrane-associated guanylate kinase-related 3 isoform
1 [Homo sapiens]
Length = 1481
Score = 50.1 bits (118), Expect = 2e-06
Identities = 23/44 (52%), Positives = 33/44 (75%)
Query: 87 IVDHRPQVGDLVLHINGESTQGLTHAQAVERIRAGGPQLHLVIR 130
I D R VGD ++ INGE TQG+TH +A+E I+AGG ++ L++R
Sbjct: 1057 IKDGRIHVGDQIVEINGEPTQGITHTRAIELIQAGGNKVLLLLR 1100
Score = 32.7 bits (73), Expect = 0.31
Identities = 23/79 (29%), Positives = 35/79 (44%), Gaps = 5/79 (6%)
Query: 93 QVGDLVLHINGESTQGLTHAQAVERIRAGGPQLHLVIRRPLETHPGKPRGVGEPRKGVDR 152
+VGD + +NG+S L+H V+ I+ G + L + E H G P G R+
Sbjct: 898 KVGDHISAVNGQSIVELSHDNIVQLIKDAGVTVTLTVIAE-EEHHGPPSGTNSARQSPAL 956
Query: 153 SPDPGGP----EVTGSRSS 167
P G + G RS+
Sbjct: 957 QHRPMGQSQANHIPGDRSA 975
Score = 31.2 bits (69), Expect = 0.91
Identities = 27/103 (26%), Positives = 38/103 (36%), Gaps = 7/103 (6%)
Query: 134 ETHPGKPRGVGEPRKGVDRSPDPGGPEVTGSRSSSTSLVQHPPSRTTLKKTRGSPEPSPE 193
E GK GE S D G V + S L Q P + KT E
Sbjct: 1381 ENEKGKKVTTGE----TSSSNDKIGENV---QLSEKRLKQEPEEKVVSNKTEDHKGKELE 1433
Query: 194 AAADGPTVSPPERRAEDPNDQIPGSPGPWLVPSEERLSRALGV 236
AA + + P + +PGPW VPS +++ +G+
Sbjct: 1434 AADKNKETGRFKPESSSPVKKTLITPGPWKVPSGNKVTGTIGM 1476
>gi|155969695 membrane-associated guanylate kinase-related 3 isoform
2 [Homo sapiens]
Length = 1125
Score = 50.1 bits (118), Expect = 2e-06
Identities = 23/44 (52%), Positives = 33/44 (75%)
Query: 87 IVDHRPQVGDLVLHINGESTQGLTHAQAVERIRAGGPQLHLVIR 130
I D R VGD ++ INGE TQG+TH +A+E I+AGG ++ L++R
Sbjct: 1057 IKDGRIHVGDQIVEINGEPTQGITHTRAIELIQAGGNKVLLLLR 1100
Score = 32.7 bits (73), Expect = 0.31
Identities = 23/79 (29%), Positives = 35/79 (44%), Gaps = 5/79 (6%)
Query: 93 QVGDLVLHINGESTQGLTHAQAVERIRAGGPQLHLVIRRPLETHPGKPRGVGEPRKGVDR 152
+VGD + +NG+S L+H V+ I+ G + L + E H G P G R+
Sbjct: 898 KVGDHISAVNGQSIVELSHDNIVQLIKDAGVTVTLTVIAE-EEHHGPPSGTNSARQSPAL 956
Query: 153 SPDPGGP----EVTGSRSS 167
P G + G RS+
Sbjct: 957 QHRPMGQSQANHIPGDRSA 975
>gi|38327612 PDZ and LIM domain 2 isoform 3 [Homo sapiens]
Length = 278
Score = 48.5 bits (114), Expect = 5e-06
Identities = 45/147 (30%), Positives = 66/147 (44%), Gaps = 21/147 (14%)
Query: 89 DHRPQVGDLVLHINGESTQGLTHAQAVERIRAGGPQLHLVIRRPLETHPGKPRGVGEPRK 148
D RP GD+++ INGES +G+ HA+A +IR L L + R T PG+ G
Sbjct: 42 DLRP--GDIIVAINGESAEGMLHAEAQSKIRQSPSPLRLQLDRSQATSPGQTNG------ 93
Query: 149 GVDRSPDPGGPEVTGS----RSSSTSLVQHPPSRTTLKKTRGSPEPSPEAAADGPTVSPP 204
D S + GS S +SL S T+L GSP P +++ +
Sbjct: 94 --DSSLEVLATRFQGSVRTYTESQSSLRSSYSSPTSLSPRAGSPFSPPPSSSSLTGEAAI 151
Query: 205 ERRAEDPNDQIPGSPGPWLVPSEERLS 231
R + + SPG +P+ +RLS
Sbjct: 152 SRSFQ----SLACSPG---LPAADRLS 171
>gi|28866957 PDZ and LIM domain 2 isoform 1 [Homo sapiens]
Length = 366
Score = 48.5 bits (114), Expect = 5e-06
Identities = 45/147 (30%), Positives = 66/147 (44%), Gaps = 21/147 (14%)
Query: 89 DHRPQVGDLVLHINGESTQGLTHAQAVERIRAGGPQLHLVIRRPLETHPGKPRGVGEPRK 148
D RP GD+++ INGES +G+ HA+A +IR L L + R T PG+ G
Sbjct: 42 DLRP--GDIIVAINGESAEGMLHAEAQSKIRQSPSPLRLQLDRSQATSPGQTNG------ 93
Query: 149 GVDRSPDPGGPEVTGS----RSSSTSLVQHPPSRTTLKKTRGSPEPSPEAAADGPTVSPP 204
D S + GS S +SL S T+L GSP P +++ +
Sbjct: 94 --DSSLEVLATRFQGSVRTYTESQSSLRSSYSSPTSLSPRAGSPFSPPPSSSSLTGEAAI 151
Query: 205 ERRAEDPNDQIPGSPGPWLVPSEERLS 231
R + + SPG +P+ +RLS
Sbjct: 152 SRSFQ----SLACSPG---LPAADRLS 171
>gi|21361888 PDZ and LIM domain 2 isoform 2 [Homo sapiens]
Length = 352
Score = 48.5 bits (114), Expect = 5e-06
Identities = 45/147 (30%), Positives = 66/147 (44%), Gaps = 21/147 (14%)
Query: 89 DHRPQVGDLVLHINGESTQGLTHAQAVERIRAGGPQLHLVIRRPLETHPGKPRGVGEPRK 148
D RP GD+++ INGES +G+ HA+A +IR L L + R T PG+ G
Sbjct: 42 DLRP--GDIIVAINGESAEGMLHAEAQSKIRQSPSPLRLQLDRSQATSPGQTNG------ 93
Query: 149 GVDRSPDPGGPEVTGS----RSSSTSLVQHPPSRTTLKKTRGSPEPSPEAAADGPTVSPP 204
D S + GS S +SL S T+L GSP P +++ +
Sbjct: 94 --DSSLEVLATRFQGSVRTYTESQSSLRSSYSSPTSLSPRAGSPFSPPPSSSSLTGEAAI 151
Query: 205 ERRAEDPNDQIPGSPGPWLVPSEERLS 231
R + + SPG +P+ +RLS
Sbjct: 152 SRSFQ----SLACSPG---LPAADRLS 171
>gi|197383077 PDZ and LIM domain 5 isoform a [Homo sapiens]
Length = 596
Score = 46.2 bits (108), Expect = 3e-05
Identities = 51/193 (26%), Positives = 83/193 (43%), Gaps = 44/193 (22%)
Query: 93 QVGDLVLHINGESTQGLTHAQAVERIRAGGPQLHLVIRR--------PLETHPGKPRGVG 144
++GD+VL I+G + QG+TH +A +I+ L++ ++R P+ G+P+ V
Sbjct: 45 RIGDVVLSIDGINAQGMTHLEAQNKIKGCTGSLNMTLQRASAAPKPEPVPVQKGEPKEVV 104
Query: 145 EP---------------RKGVDRSPDPGG----PEVTGSRSSSTSLVQHPPSRTTLKKTR 185
+P +++P P G P+VT S S++ P+ T T
Sbjct: 105 KPVPITSPAVSKVTSTNNMAYNKAPRPFGSVSSPKVTSIPSPSSAFT---PAHAT---TS 158
Query: 186 GSPEPSPEAAADGP--TVSPPERRAEDPNDQIPG--SPGPWL--VPSEERLSRALGVRGA 239
PSP AA P S A DQ P S G VP + ++
Sbjct: 159 SHASPSPVAAVTPPLFAASGLHANANLSADQSPSALSAGKTAVNVPRQPTVTSV-----C 213
Query: 240 AQLAQEMAAGRRR 252
++ +QE+A G+RR
Sbjct: 214 SETSQELAEGQRR 226
>gi|42741675 PDZ and LIM domain 7 isoform 2 [Homo sapiens]
Length = 423
Score = 46.2 bits (108), Expect = 3e-05
Identities = 45/151 (29%), Positives = 64/151 (42%), Gaps = 24/151 (15%)
Query: 94 VGDLVLHINGESTQGLTHAQAVERIRAGGPQLHLVIRR--PLETHPGK----------PR 141
VGD VL I+GE+ LTH +A +IRA G +L L + R P+++ P K P
Sbjct: 46 VGDWVLSIDGENAGSLTHIEAQNKIRACGERLSLGLSRAQPVQSKPQKVQTPDKQPLRPL 105
Query: 142 GVGEPRKGVDRSPDPGGPEVTGSRSSSTSLVQH--------PPSRTTLKKTRGSPEPSPE 193
++ + + + P +S S ++ H P LKK+ S P E
Sbjct: 106 VPDASKQRLMENTEDWRPRPGTGQSRSFRILAHLTGTEFMQDPDEEHLKKS--SQVPRTE 163
Query: 194 AAADGPTVSPPERRAEDPNDQIPGSPGPWLV 224
A A P S P+ P P S PW V
Sbjct: 164 APA--PASSTPQEPWPGPTAPSPTSRPPWAV 192
>gi|112363080 microtubule associated serine/threonine kinase 2 [Homo
sapiens]
Length = 1798
Score = 43.9 bits (102), Expect = 1e-04
Identities = 52/204 (25%), Positives = 81/204 (39%), Gaps = 29/204 (14%)
Query: 21 SPLAGPSARQLLARLDARPLAARAAVDVAALVRRAGATLRLRRKEAVSVLDSADIEVTDS 80
S + PS+R D P A ++ ++ RAG + + +D+
Sbjct: 1078 SQSSNPSSRDSSPSRDFLP--ALGSMRPPIIIHRAGKKYGFTLRAIRVYMGDSDVYTVHH 1135
Query: 81 RLPHATIVDHRP------QVGDLVLHINGESTQGLTHAQAVERIRAGGPQLHLVIRRPLE 134
+ H + D P + GDL+ H+NGE GL H + VE I G ++ + PLE
Sbjct: 1136 MVWH--VEDGGPASEAGLRQGDLITHVNGEPVHGLVHTEVVELILKSGNKV-AISTTPLE 1192
Query: 135 THPGKPRGVGEPRKG------VDRSPDPGGPEVTGSRSSST---------SLVQHPPSRT 179
K VG RKG RS G + SR S+ SL+ S +
Sbjct: 1193 NTSIK---VGPARKGSYKAKMARRSKRSRGKDGQESRKRSSLFRKITKQASLLHTSRSLS 1249
Query: 180 TLKKTRGSPEPSPEAAADGPTVSP 203
+L ++ S E P + ++SP
Sbjct: 1250 SLNRSLSSGESGPGSPTHSHSLSP 1273
>gi|116256464 hypothetical protein LOC343990 [Homo sapiens]
Length = 962
Score = 43.9 bits (102), Expect = 1e-04
Identities = 36/118 (30%), Positives = 49/118 (41%), Gaps = 18/118 (15%)
Query: 138 GKPRGVGEPRKGVDRSPDPGG---PEVTGSRSSSTSLVQHPPSRTTLKKTRGSPEPSPEA 194
G P EP + + P+ G PE G+ S+ P ++ LK P A
Sbjct: 452 GPPGPAPEPEREAETEPERGAGTEPERIGTEPSTAPAPSPPAPKSCLKHR-------PAA 504
Query: 195 AADGPTVSPPERRAEDPNDQIPGSPGPWLVPSEERLSRALGVRGAAQLAQEMAAGRRR 252
A++GP SPP AE P P PGP + +E A R A+ A+ AG R
Sbjct: 505 ASEGPAASPPLAAAESP----PVEPGPGSLDAE----AAAPERPKAERAEAPPAGAER 554
Score = 36.2 bits (82), Expect = 0.028
Identities = 27/97 (27%), Positives = 41/97 (42%), Gaps = 8/97 (8%)
Query: 133 LETHPGKPRGVGEPRKGVDRSPDPGGP---EVTGSRSSSTSLVQHPPSRTTLKKTRGSPE 189
LE P + G+ DR P+PG P G + + +QH + T + G P
Sbjct: 270 LEVSPEERPSSGQQDVAPDRGPEPGPPAPLPPPGGARARRARLQHSSALTASVEEGGVPG 329
Query: 190 PSPEAAADGPTVSPPER----RAEDPN-DQIPGSPGP 221
P + P ++ PE R E P+ + P +PGP
Sbjct: 330 EDPSSRPATPELAEPESAPTLRVEPPSPPEGPPNPGP 366
>gi|66730423 hypothetical protein LOC389384 [Homo sapiens]
Length = 652
Score = 43.1 bits (100), Expect = 2e-04
Identities = 65/273 (23%), Positives = 106/273 (38%), Gaps = 62/273 (22%)
Query: 2 EPRTGGAANPKGSRG-SRGPSPL--AGPSARQLLARLDARPLAARAAVDV-AALVRRAGA 57
EPR + P+G G S+ P PL AG A + A D +P + AA V +A
Sbjct: 114 EPRERASRRPRGKEGISQHPEPLEAAGEPALRKKAHHDKKPSRKKQGHKKHAAEVTKAAQ 173
Query: 58 TLRLRRKE-----AVSVLDSADIEVTDSRL-----------------------PHAT--- 86
R +E A + L S + ++ +R PHAT
Sbjct: 174 DQEARGREEGLSKAAAALRSGEADLGPARRGGEDSDHQSFLIKVDGTGALDVSPHATGHQ 233
Query: 87 ----------------IVDHRPQVGDLVLHINGESTQ-GLTHAQAVERIRAGGPQLHLVI 129
IV+ +VGD ++Q G+ +R + +
Sbjct: 234 QEEELKKPDQDAIIQMIVELLKRVGDQWEEEQSLASQLGVALPNPAPAVRKKSQEKKTSL 293
Query: 130 RRPLETHPGKPRGVGEPRKGVDRSPDPGGPEVTGSRSSS---TSLVQHPPSRTT---LKK 183
+R +T+P K G E ++G + D PE + SS + H PS ++ L++
Sbjct: 294 KRTSKTNP-KKHGSEEAKRG---AADVSSPEAWPPKKSSFLPLCVSGHRPSISSSYGLEE 349
Query: 184 TRGSPEPSPEAAADGPTVSPPERRAEDPNDQIP 216
+ PS EA A GP+V P +++P +++P
Sbjct: 350 PKVQEAPSTEAGAPGPSVLPTPSESQEPGEELP 382
>gi|66346708 membrane associated guanylate kinase, WW and PDZ domain
containing 1 isoform b [Homo sapiens]
Length = 1256
Score = 42.0 bits (97), Expect = 5e-04
Identities = 16/39 (41%), Positives = 30/39 (76%)
Query: 93 QVGDLVLHINGESTQGLTHAQAVERIRAGGPQLHLVIRR 131
++GD +L INGE+T+ + H++A+E I+ GG ++ L ++R
Sbjct: 1194 RIGDEILEINGETTKNMKHSRAIELIKNGGRRVRLFLKR 1232
Score = 32.7 bits (73), Expect = 0.31
Identities = 37/138 (26%), Positives = 60/138 (43%), Gaps = 24/138 (17%)
Query: 95 GDLVLHINGESTQGLTHAQAVERI--RAGGPQLHLVIRRPLETHPGKPRGVGEPRKGVDR 152
GDL++ +N ++ Q LTH Q V+ + G ++ L+++R G+ P+K
Sbjct: 683 GDLIVEVNKKNVQALTHNQVVDMLVECPKGSEVTLLVQR---------GGLPVPKK---- 729
Query: 153 SPDPGGPEVTGSRSSSTSLVQHPPSRTTLKKTRGSPEPSPEAAADGPTVSPPERRAEDPN 212
SP E S++SS V S T SP S + + P P E +A D
Sbjct: 730 SPKSQPLERKDSQNSSQHSVSSHRSLHT-----ASPSHSTQVLPEFP---PAEAQAPDQT 781
Query: 213 DQI-PGSPGPWLVPSEER 229
D P P+ + ++ R
Sbjct: 782 DSSGQKKPDPFKIWAQSR 799
Score = 29.3 bits (64), Expect = 3.4
Identities = 22/102 (21%), Positives = 39/102 (38%), Gaps = 20/102 (19%)
Query: 93 QVGDLVLHINGESTQGLTHAQAVERIRAGGPQLHLVIRRPLETHPGKPRGVGEPRKGVDR 152
+VGD +L +NG S +H+ V I+ G + L I +
Sbjct: 1054 KVGDRILAVNGCSITNKSHSDIVNLIKEAGNTVTLRI--------------------IPG 1093
Query: 153 SPDPGGPEVTGSRSSSTSLVQHPPSRTTLKKTRGSPEPSPEA 194
+T + +T H PS+ ++TR + +P E+
Sbjct: 1094 DESSNATLLTNAEKIATITTTHTPSQQGTQETRNTTKPKQES 1135
>gi|74272282 membrane associated guanylate kinase, WW and PDZ domain
containing 1 isoform a [Homo sapiens]
Length = 1287
Score = 42.0 bits (97), Expect = 5e-04
Identities = 16/39 (41%), Positives = 30/39 (76%)
Query: 93 QVGDLVLHINGESTQGLTHAQAVERIRAGGPQLHLVIRR 131
++GD +L INGE+T+ + H++A+E I+ GG ++ L ++R
Sbjct: 1193 RIGDEILEINGETTKNMKHSRAIELIKNGGRRVRLFLKR 1231
Score = 32.7 bits (73), Expect = 0.31
Identities = 37/138 (26%), Positives = 60/138 (43%), Gaps = 24/138 (17%)
Query: 95 GDLVLHINGESTQGLTHAQAVERI--RAGGPQLHLVIRRPLETHPGKPRGVGEPRKGVDR 152
GDL++ +N ++ Q LTH Q V+ + G ++ L+++R G+ P+K
Sbjct: 683 GDLIVEVNKKNVQALTHNQVVDMLVECPKGSEVTLLVQR---------GGLPVPKK---- 729
Query: 153 SPDPGGPEVTGSRSSSTSLVQHPPSRTTLKKTRGSPEPSPEAAADGPTVSPPERRAEDPN 212
SP E S++SS V S T SP S + + P P E +A D
Sbjct: 730 SPKSQPLERKDSQNSSQHSVSSHRSLHT-----ASPSHSTQVLPEFP---PAEAQAPDQT 781
Query: 213 DQI-PGSPGPWLVPSEER 229
D P P+ + ++ R
Sbjct: 782 DSSGQKKPDPFKIWAQSR 799
Score = 29.3 bits (64), Expect = 3.4
Identities = 22/102 (21%), Positives = 39/102 (38%), Gaps = 20/102 (19%)
Query: 93 QVGDLVLHINGESTQGLTHAQAVERIRAGGPQLHLVIRRPLETHPGKPRGVGEPRKGVDR 152
+VGD +L +NG S +H+ V I+ G + L I +
Sbjct: 1053 KVGDRILAVNGCSITNKSHSDIVNLIKEAGNTVTLRI--------------------IPG 1092
Query: 153 SPDPGGPEVTGSRSSSTSLVQHPPSRTTLKKTRGSPEPSPEA 194
+T + +T H PS+ ++TR + +P E+
Sbjct: 1093 DESSNATLLTNAEKIATITTTHTPSQQGTQETRNTTKPKQES 1134
>gi|18375650 protein tyrosine phosphatase, non-receptor type 13
isoform 4 [Homo sapiens]
Length = 2490
Score = 41.6 bits (96), Expect = 7e-04
Identities = 20/43 (46%), Positives = 27/43 (62%)
Query: 89 DHRPQVGDLVLHINGESTQGLTHAQAVERIRAGGPQLHLVIRR 131
D R GD VL +NG S +G TH QAVE +R G +HL++ +
Sbjct: 1414 DGRIHKGDRVLAVNGVSLEGATHKQAVETLRNTGQVVHLLLEK 1456
Score = 37.4 bits (85), Expect = 0.013
Identities = 14/39 (35%), Positives = 26/39 (66%)
Query: 94 VGDLVLHINGESTQGLTHAQAVERIRAGGPQLHLVIRRP 132
VGD++L +NG S +GL+ + + +R P++ L++ RP
Sbjct: 1555 VGDVILKVNGASLKGLSQQEVISALRGTAPEVFLLLCRP 1593
Score = 33.9 bits (76), Expect = 0.14
Identities = 17/46 (36%), Positives = 24/46 (52%)
Query: 89 DHRPQVGDLVLHINGESTQGLTHAQAVERIRAGGPQLHLVIRRPLE 134
D R + GD ++ +N +TH AV +RA + LVI R LE
Sbjct: 1830 DGRLKPGDRLIKVNDTDVTNMTHTDAVNLLRAASKTVRLVIGRVLE 1875
Score = 29.6 bits (65), Expect = 2.6
Identities = 13/40 (32%), Positives = 24/40 (60%)
Query: 95 GDLVLHINGESTQGLTHAQAVERIRAGGPQLHLVIRRPLE 134
GD ++ +N S +G++H A+E ++ + LVI +P E
Sbjct: 1141 GDRLISVNSVSLEGVSHHAAIEILQNAPEDVTLVISQPKE 1180
Score = 29.3 bits (64), Expect = 3.4
Identities = 29/126 (23%), Positives = 52/126 (41%), Gaps = 12/126 (9%)
Query: 75 IEVTDSRLPHATIVDHRPQVGDLVLHINGESTQGLTHAQAVERIRAGGPQLHL-VIRRPL 133
+ ++D ++ Q+ D++ ++NG STQG+T + + P L L R L
Sbjct: 1913 VYISDINPRSVAAIEGNLQLLDVIHYVNGVSTQGMTLEEVNRALDMSLPSLVLKATRNDL 1972
Query: 134 ETHPGKPR-GVGEPRKGVDRSPDPGG----PEVTGSRSSST------SLVQHPPSRTTLK 182
P R V P+ G P +T + S ST + + +P + +
Sbjct: 1973 PVVPSSKRSAVSAPKSTKGNGSYSVGSCSQPALTPNDSFSTVAGEEINEISYPKGKCSTY 2032
Query: 183 KTRGSP 188
+ +GSP
Sbjct: 2033 QIKGSP 2038
>gi|18375648 protein tyrosine phosphatase, non-receptor type 13
isoform 3 [Homo sapiens]
Length = 2294
Score = 41.6 bits (96), Expect = 7e-04
Identities = 20/43 (46%), Positives = 27/43 (62%)
Query: 89 DHRPQVGDLVLHINGESTQGLTHAQAVERIRAGGPQLHLVIRR 131
D R GD VL +NG S +G TH QAVE +R G +HL++ +
Sbjct: 1218 DGRIHKGDRVLAVNGVSLEGATHKQAVETLRNTGQVVHLLLEK 1260
Score = 37.4 bits (85), Expect = 0.013
Identities = 14/39 (35%), Positives = 26/39 (66%)
Query: 94 VGDLVLHINGESTQGLTHAQAVERIRAGGPQLHLVIRRP 132
VGD++L +NG S +GL+ + + +R P++ L++ RP
Sbjct: 1359 VGDVILKVNGASLKGLSQQEVISALRGTAPEVFLLLCRP 1397
Score = 33.9 bits (76), Expect = 0.14
Identities = 17/46 (36%), Positives = 24/46 (52%)
Query: 89 DHRPQVGDLVLHINGESTQGLTHAQAVERIRAGGPQLHLVIRRPLE 134
D R + GD ++ +N +TH AV +RA + LVI R LE
Sbjct: 1634 DGRLKPGDRLIKVNDTDVTNMTHTDAVNLLRAASKTVRLVIGRVLE 1679
Score = 29.6 bits (65), Expect = 2.6
Identities = 13/40 (32%), Positives = 24/40 (60%)
Query: 95 GDLVLHINGESTQGLTHAQAVERIRAGGPQLHLVIRRPLE 134
GD ++ +N S +G++H A+E ++ + LVI +P E
Sbjct: 950 GDRLISVNSVSLEGVSHHAAIEILQNAPEDVTLVISQPKE 989
Score = 29.3 bits (64), Expect = 3.4
Identities = 29/126 (23%), Positives = 52/126 (41%), Gaps = 12/126 (9%)
Query: 75 IEVTDSRLPHATIVDHRPQVGDLVLHINGESTQGLTHAQAVERIRAGGPQLHL-VIRRPL 133
+ ++D ++ Q+ D++ ++NG STQG+T + + P L L R L
Sbjct: 1717 VYISDINPRSVAAIEGNLQLLDVIHYVNGVSTQGMTLEEVNRALDMSLPSLVLKATRNDL 1776
Query: 134 ETHPGKPR-GVGEPRKGVDRSPDPGG----PEVTGSRSSST------SLVQHPPSRTTLK 182
P R V P+ G P +T + S ST + + +P + +
Sbjct: 1777 PVVPSSKRSAVSAPKSTKGNGSYSVGSCSQPALTPNDSFSTVAGEEINEISYPKGKCSTY 1836
Query: 183 KTRGSP 188
+ +GSP
Sbjct: 1837 QIKGSP 1842
>gi|18375646 protein tyrosine phosphatase, non-receptor type 13
isoform 1 [Homo sapiens]
Length = 2485
Score = 41.6 bits (96), Expect = 7e-04
Identities = 20/43 (46%), Positives = 27/43 (62%)
Query: 89 DHRPQVGDLVLHINGESTQGLTHAQAVERIRAGGPQLHLVIRR 131
D R GD VL +NG S +G TH QAVE +R G +HL++ +
Sbjct: 1409 DGRIHKGDRVLAVNGVSLEGATHKQAVETLRNTGQVVHLLLEK 1451
Score = 37.4 bits (85), Expect = 0.013
Identities = 14/39 (35%), Positives = 26/39 (66%)
Query: 94 VGDLVLHINGESTQGLTHAQAVERIRAGGPQLHLVIRRP 132
VGD++L +NG S +GL+ + + +R P++ L++ RP
Sbjct: 1550 VGDVILKVNGASLKGLSQQEVISALRGTAPEVFLLLCRP 1588
Score = 33.9 bits (76), Expect = 0.14
Identities = 17/46 (36%), Positives = 24/46 (52%)
Query: 89 DHRPQVGDLVLHINGESTQGLTHAQAVERIRAGGPQLHLVIRRPLE 134
D R + GD ++ +N +TH AV +RA + LVI R LE
Sbjct: 1825 DGRLKPGDRLIKVNDTDVTNMTHTDAVNLLRAASKTVRLVIGRVLE 1870
Score = 29.6 bits (65), Expect = 2.6
Identities = 13/40 (32%), Positives = 24/40 (60%)
Query: 95 GDLVLHINGESTQGLTHAQAVERIRAGGPQLHLVIRRPLE 134
GD ++ +N S +G++H A+E ++ + LVI +P E
Sbjct: 1141 GDRLISVNSVSLEGVSHHAAIEILQNAPEDVTLVISQPKE 1180
Score = 29.3 bits (64), Expect = 3.4
Identities = 29/126 (23%), Positives = 52/126 (41%), Gaps = 12/126 (9%)
Query: 75 IEVTDSRLPHATIVDHRPQVGDLVLHINGESTQGLTHAQAVERIRAGGPQLHL-VIRRPL 133
+ ++D ++ Q+ D++ ++NG STQG+T + + P L L R L
Sbjct: 1908 VYISDINPRSVAAIEGNLQLLDVIHYVNGVSTQGMTLEEVNRALDMSLPSLVLKATRNDL 1967
Query: 134 ETHPGKPR-GVGEPRKGVDRSPDPGG----PEVTGSRSSST------SLVQHPPSRTTLK 182
P R V P+ G P +T + S ST + + +P + +
Sbjct: 1968 PVVPSSKRSAVSAPKSTKGNGSYSVGSCSQPALTPNDSFSTVAGEEINEISYPKGKCSTY 2027
Query: 183 KTRGSP 188
+ +GSP
Sbjct: 2028 QIKGSP 2033
>gi|5453992 protein tyrosine phosphatase, non-receptor type 13 isoform
2 [Homo sapiens]
Length = 2466
Score = 41.6 bits (96), Expect = 7e-04
Identities = 20/43 (46%), Positives = 27/43 (62%)
Query: 89 DHRPQVGDLVLHINGESTQGLTHAQAVERIRAGGPQLHLVIRR 131
D R GD VL +NG S +G TH QAVE +R G +HL++ +
Sbjct: 1390 DGRIHKGDRVLAVNGVSLEGATHKQAVETLRNTGQVVHLLLEK 1432
Score = 37.4 bits (85), Expect = 0.013
Identities = 14/39 (35%), Positives = 26/39 (66%)
Query: 94 VGDLVLHINGESTQGLTHAQAVERIRAGGPQLHLVIRRP 132
VGD++L +NG S +GL+ + + +R P++ L++ RP
Sbjct: 1531 VGDVILKVNGASLKGLSQQEVISALRGTAPEVFLLLCRP 1569
Score = 33.9 bits (76), Expect = 0.14
Identities = 17/46 (36%), Positives = 24/46 (52%)
Query: 89 DHRPQVGDLVLHINGESTQGLTHAQAVERIRAGGPQLHLVIRRPLE 134
D R + GD ++ +N +TH AV +RA + LVI R LE
Sbjct: 1806 DGRLKPGDRLIKVNDTDVTNMTHTDAVNLLRAASKTVRLVIGRVLE 1851
Score = 29.6 bits (65), Expect = 2.6
Identities = 13/40 (32%), Positives = 24/40 (60%)
Query: 95 GDLVLHINGESTQGLTHAQAVERIRAGGPQLHLVIRRPLE 134
GD ++ +N S +G++H A+E ++ + LVI +P E
Sbjct: 1122 GDRLISVNSVSLEGVSHHAAIEILQNAPEDVTLVISQPKE 1161
Score = 29.3 bits (64), Expect = 3.4
Identities = 29/126 (23%), Positives = 52/126 (41%), Gaps = 12/126 (9%)
Query: 75 IEVTDSRLPHATIVDHRPQVGDLVLHINGESTQGLTHAQAVERIRAGGPQLHL-VIRRPL 133
+ ++D ++ Q+ D++ ++NG STQG+T + + P L L R L
Sbjct: 1889 VYISDINPRSVAAIEGNLQLLDVIHYVNGVSTQGMTLEEVNRALDMSLPSLVLKATRNDL 1948
Query: 134 ETHPGKPR-GVGEPRKGVDRSPDPGG----PEVTGSRSSST------SLVQHPPSRTTLK 182
P R V P+ G P +T + S ST + + +P + +
Sbjct: 1949 PVVPSSKRSAVSAPKSTKGNGSYSVGSCSQPALTPNDSFSTVAGEEINEISYPKGKCSTY 2008
Query: 183 KTRGSP 188
+ +GSP
Sbjct: 2009 QIKGSP 2014
>gi|148277064 cut-like homeobox 1 isoform a [Homo sapiens]
Length = 1505
Score = 40.8 bits (94), Expect = 0.001
Identities = 33/106 (31%), Positives = 41/106 (38%), Gaps = 5/106 (4%)
Query: 99 LHINGESTQGLTHAQAVERIRAGGPQLHLVIRRPLETHPGKPRGVGEPRKGVDRSPDPGG 158
L +NGE QG+ Q ++ GP LH V G P+ SP P
Sbjct: 1004 LWLNGELGQGVLPVQGQQQ----GPVLHSVTSLQDPLQQGCVSSESTPKTSASCSPAPES 1059
Query: 159 PEVTG-SRSSSTSLVQHPPSRTTLKKTRGSPEPSPEAAADGPTVSP 203
P + S S T LVQ P K PEPS A+D +P
Sbjct: 1060 PMSSSESVKSLTELVQQPCPPIEASKDSKPPEPSDPPASDSQPTTP 1105
>gi|19924103 synapsin II isoform IIa [Homo sapiens]
Length = 582
Score = 40.4 bits (93), Expect = 0.001
Identities = 26/84 (30%), Positives = 38/84 (45%), Gaps = 2/84 (2%)
Query: 130 RRPLETHPGKPRGVGEPRKGVDRSPDPGGPEVTGSRSSSTSLVQHPPSRTTLKKTRGSPE 189
R P + PG+P+G+ P K + P GP + S SSS+S P R T G
Sbjct: 452 RPPPQGGPGQPQGMQPPGKVLPPRRLPPGPSLPPSSSSSSSSSSSAPQRPGGPTTHGDAP 511
Query: 190 PSPEAAADG--PTVSPPERRAEDP 211
S + A+ P +PP++ P
Sbjct: 512 SSSSSLAEAQPPLAAPPQKPQPHP 535
>gi|4507137 acidic alpha 1 syntrophin [Homo sapiens]
Length = 505
Score = 40.4 bits (93), Expect = 0.001
Identities = 45/189 (23%), Positives = 71/189 (37%), Gaps = 16/189 (8%)
Query: 16 GSRGPSPLAGPSARQLLARLD--ARPLAARAAVDVAALVRRAGATLRLRRKEAVSVLDSA 73
G GP P G Q A+L+ A P A + A L++R T+R + +
Sbjct: 47 GDPGPEP--GAPREQEPAQLNGAAEPGAGPPQLPEALLLQRRRVTVRKADAGGLGISIKG 104
Query: 74 DIE----VTDSRLPHATIVDHRPQ--VGDLVLHINGESTQGLTHAQAVERIRAGGPQLHL 127
E + S++ D VGD +L +NGE TH +AV+ ++ G ++ L
Sbjct: 105 GRENKMPILISKIFKGLAADQTEALFVGDAILSVNGEDLSSATHDEAVQVLKKTGKEVVL 164
Query: 128 VIRRPLETHPGKPRGVGEPRKGVDRSP------DPGGPEVTGSRSSSTSLVQHPPSRTTL 181
++ + P G G D P P P T S + + +
Sbjct: 165 EVKYMKDVSPYFKNSTGGTSVGWDSPPASPLQRQPSSPGPTPRNFSEAKHMSLKMAYVSK 224
Query: 182 KKTRGSPEP 190
+ T PEP
Sbjct: 225 RCTPNDPEP 233
>gi|47157328 PDZ and LIM domain 7 isoform 4 [Homo sapiens]
Length = 222
Score = 40.4 bits (93), Expect = 0.001
Identities = 27/75 (36%), Positives = 40/75 (53%), Gaps = 10/75 (13%)
Query: 94 VGDLVLHINGESTQGLTHAQAVERIRAGGPQLHLVIRR--PLETHPGK--------PRGV 143
VGD VL I+GE+ LTH +A +IRA G +L L + R P+++ P K PR
Sbjct: 46 VGDWVLSIDGENAGSLTHIEAQNKIRACGERLSLGLSRAQPVQSKPQKASAPAADPPRYT 105
Query: 144 GEPRKGVDRSPDPGG 158
P ++++ P G
Sbjct: 106 FAPSVSLNKTARPFG 120
>gi|11496885 PDZ and LIM domain 7 isoform 1 [Homo sapiens]
Length = 457
Score = 40.4 bits (93), Expect = 0.001
Identities = 27/75 (36%), Positives = 40/75 (53%), Gaps = 10/75 (13%)
Query: 94 VGDLVLHINGESTQGLTHAQAVERIRAGGPQLHLVIRR--PLETHPGK--------PRGV 143
VGD VL I+GE+ LTH +A +IRA G +L L + R P+++ P K PR
Sbjct: 46 VGDWVLSIDGENAGSLTHIEAQNKIRACGERLSLGLSRAQPVQSKPQKASAPAADPPRYT 105
Query: 144 GEPRKGVDRSPDPGG 158
P ++++ P G
Sbjct: 106 FAPSVSLNKTARPFG 120
>gi|240255430 hypothetical protein LOC100289135 [Homo sapiens]
Length = 215
Score = 40.0 bits (92), Expect = 0.002
Identities = 42/155 (27%), Positives = 59/155 (38%), Gaps = 13/155 (8%)
Query: 88 VDHRPQVGDLVLHINGESTQGLTHAQAVERIRAGGPQLHLVIRRP-LETHPGKPRGVGEP 146
+DH G+L + + T+G +V+R R Q V RRP L+ G P
Sbjct: 70 LDHGADAGEL--RLGRQRTRGRVRGLSVQRARCRHLQRPAVPRRPDLDHFLAASLSGGSP 127
Query: 147 RKGVDRSPDPGGPEVTGSRSSSTSLVQHPPSRT---TLKKTRGSPEPSPEAAADGPTVSP 203
R G G E +TS+V PS+ T + P P P AAA P P
Sbjct: 128 RSGSHFPVQDAGSE-------ATSVVARDPSQDLPGTRRDGTLGPRPQPPAAAGAPGFDP 180
Query: 204 PERRAEDPNDQIPGSPGPWLVPSEERLSRALGVRG 238
+ ++ G P ++ S L L RG
Sbjct: 181 ASPWGDRSVPELGGDLKPMVLTSTPWLRARLRGRG 215
>gi|239754604 PREDICTED: similar to hCG1802898 [Homo sapiens]
Length = 229
Score = 40.0 bits (92), Expect = 0.002
Identities = 42/155 (27%), Positives = 59/155 (38%), Gaps = 13/155 (8%)
Query: 88 VDHRPQVGDLVLHINGESTQGLTHAQAVERIRAGGPQLHLVIRRP-LETHPGKPRGVGEP 146
+DH G+L + + T+G +V+R R Q V RRP L+ G P
Sbjct: 84 LDHGADAGEL--RLGRQRTRGRVRGLSVQRARCRHLQRPAVPRRPDLDHFLAASLSGGSP 141
Query: 147 RKGVDRSPDPGGPEVTGSRSSSTSLVQHPPSRT---TLKKTRGSPEPSPEAAADGPTVSP 203
R G G E +TS+V PS+ T + P P P AAA P P
Sbjct: 142 RSGSHFPVQDAGSE-------ATSVVARDPSQDLPGTRRDGTLGPRPQPPAAAGAPGFDP 194
Query: 204 PERRAEDPNDQIPGSPGPWLVPSEERLSRALGVRG 238
+ ++ G P ++ S L L RG
Sbjct: 195 ASPWGDRSVPELGGDLKPMVLTSTPWLRARLRGRG 229
>gi|239749150 PREDICTED: hypothetical protein XP_002346928 [Homo
sapiens]
Length = 229
Score = 40.0 bits (92), Expect = 0.002
Identities = 42/155 (27%), Positives = 59/155 (38%), Gaps = 13/155 (8%)
Query: 88 VDHRPQVGDLVLHINGESTQGLTHAQAVERIRAGGPQLHLVIRRP-LETHPGKPRGVGEP 146
+DH G+L + + T+G +V+R R Q V RRP L+ G P
Sbjct: 84 LDHGADAGEL--RLGRQRTRGRVRGLSVQRARCRHLQRPAVPRRPDLDHFLAASLSGGSP 141
Query: 147 RKGVDRSPDPGGPEVTGSRSSSTSLVQHPPSRT---TLKKTRGSPEPSPEAAADGPTVSP 203
R G G E +TS+V PS+ T + P P P AAA P P
Sbjct: 142 RSGSHFPVQDAGSE-------ATSVVARDPSQDLPGTRRDGTLGPRPQPPAAAGAPGFDP 194
Query: 204 PERRAEDPNDQIPGSPGPWLVPSEERLSRALGVRG 238
+ ++ G P ++ S L L RG
Sbjct: 195 ASPWGDRSVPELGGDLKPMVLTSTPWLRARLRGRG 229
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.312 0.131 0.381
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,316,450
Number of Sequences: 37866
Number of extensions: 757361
Number of successful extensions: 6508
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 199
Number of HSP's successfully gapped in prelim test: 450
Number of HSP's that attempted gapping in prelim test: 4518
Number of HSP's gapped (non-prelim): 2438
length of query: 253
length of database: 18,247,518
effective HSP length: 100
effective length of query: 153
effective length of database: 14,460,918
effective search space: 2212520454
effective search space used: 2212520454
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.