Guide to the Human Genome
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Name: MRFAP1 Sequence: fasta or formatted (127aa) NCBI GI: 15193294
Description:

Mof4 family associated protein 1

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.2         13           2
 C cysteine            0.8          1           1
 D aspartate           3.9          5           1
 E glutamate          19.7         25           2
 F phenylalanine       1.6          2           1
 G glycine             2.4          3           1
 H histidine           1.6          2           1
 I isoleucine          5.5          7           1
 K lysine              6.3          8           1
 L leucine            10.2         13           2
 M methionine          4.7          6           1
 N asparagine          3.9          5           1
 P proline             3.9          5           1
 Q glutamine           3.1          4           1
 R arginine            7.9         10           2
 S serine              5.5          7           2
 T threonine           1.6          2           1
 V valine              5.5          7           1
 W tryptophan          0.8          1           1
 Y tyrosine            0.8          1           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   Mof4 family associated protein 1 
MRFAP1L1              0.829   Morf4 family associated protein 1-like 1 
APP                   0.041   amyloid beta A4 protein isoform c precursor 
APP                   0.041   amyloid beta A4 protein isoform e precursor 
TRIM6                 0.032   tripartite motif-containing 6 isoform 2 
TRIM6                 0.032   tripartite motif-containing 6 isoform 1 
TRIM6-TRIM34          0.032   tripartite motif-containing 6 and tripartite motif-c...
KIAA1731              0.032   hypothetical protein LOC85459 
LRRC45                0.027   leucine rich repeat containing 45 
GOLGA4                0.023   golgi autoantigen, golgin subfamily a, 4 
ANKRD24               0.023   ankyrin repeat domain 24 
CCDC46                0.023   coiled-coil domain containing 46 isoform a 
L1TD1                 0.023   LINE-1 type transposase domain containing 1 
CENPJ                 0.018   centromere protein J 
FBXO41                0.018   F-box protein 41 
JAKMIP3               0.018   Janus kinase and microtubule interacting protein 3 ...
LOC100293351          0.018   PREDICTED: hypothetical protein isoform 2 
LOC100293351          0.018   PREDICTED: hypothetical protein isoform 1 
LOC100293351          0.018   PREDICTED: hypothetical protein isoform 3 
CCHCR1                0.018   coiled-coil alpha-helical rod protein 1 isoform 1 [...
CCHCR1                0.018   coiled-coil alpha-helical rod protein 1 isoform 2 [...
CCHCR1                0.018   coiled-coil alpha-helical rod protein 1 isoform 3 [...
KRT86                 0.018   keratin 86 
NOP58                 0.018   NOP58 ribonucleoprotein homolog 
KRT81                 0.018   keratin, hair, basic, 1 
KRT83                 0.018   keratin 83 
KRT8                  0.014   keratin 8 
NEFM                  0.014   neurofilament, medium polypeptide 150kDa isoform 1 ...
NEFM                  0.014   neurofilament, medium polypeptide 150kDa isoform 2 ...
LAMC1                 0.014   laminin, gamma 1 precursor 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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