Guide to the Human Genome
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Name: NACAD Sequence: fasta or formatted (1562aa) NCBI GI: 239743134
Description:

PREDICTED: NAC alpha domain containing

Referenced in:

Translation Factors

Other entries for this name:
alt mRNA [1562aa] NAC alpha domain containing
alt prot [1522aa] PREDICTED: NAC alpha domain containing
alt prot [1522aa] PREDICTED: NAC alpha domain containing
alt prot [1522aa] PREDICTED: NAC alpha domain containing
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            13.1        205           4
 C cysteine            1.1         17           1
 D aspartate           6.3         98           2
 E glutamate           9.3        146           9
 F phenylalanine       1.0         16           2
 G glycine             6.9        107           3
 H histidine           1.0         15           1
 I isoleucine          1.7         26           1
 K lysine              2.6         40           2
 L leucine            10.4        162           3
 M methionine          1.5         24           1
 N asparagine          0.6          9           1
 P proline            13.1        205           3
 Q glutamine           6.7        105           2
 R arginine            2.8         44           2
 S serine             10.1        157           4
 T threonine           6.4        100           2
 V valine              4.7         73           2
 W tryptophan          0.4          7           1
 Y tyrosine            0.4          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: NAC alpha domain containing 
NACAD                 1.000   NAC alpha domain containing 
NACAD                 0.960   PREDICTED: NAC alpha domain containing 
NACAD                 0.959   PREDICTED: NAC alpha domain containing 
NACAD                 0.959   PREDICTED: NAC alpha domain containing 
NACA                  0.099   nascent polypeptide-associated complex alpha subuni...
NACA                  0.071   nascent polypeptide-associated complex alpha subuni...
NACA                  0.071   nascent polypeptide-associated complex alpha subunit ...
NACA                  0.071   nascent polypeptide-associated complex alpha subuni...
NACA2                 0.064   nascent-polypeptide-associated complex alpha polypep...
MLL2                  0.027   myeloid/lymphoid or mixed-lineage leukemia 2 
MUC17                 0.025   mucin 17 
FLJ22184              0.024   PREDICTED: hypothetical protein FLJ22184 
MDC1                  0.024   mediator of DNA-damage checkpoint 1 
PRG4                  0.023   proteoglycan 4 isoform D 
PRG4                  0.023   proteoglycan 4 isoform C 
PRG4                  0.023   proteoglycan 4 isoform B 
PRG4                  0.023   proteoglycan 4 isoform A 
SRCAP                 0.021   Snf2-related CBP activator protein 
MUC4                  0.021   mucin 4 isoform a 
LOC647546             0.020   PREDICTED: hypothetical protein 
TACC2                 0.020   transforming, acidic coiled-coil containing protein...
TCOF1                 0.020   Treacher Collins-Franceschetti syndrome 1 isoform e...
TCOF1                 0.020   Treacher Collins-Franceschetti syndrome 1 isoform d...
TCOF1                 0.020   Treacher Collins-Franceschetti syndrome 1 isoform a ...
KIAA0754              0.020   hypothetical protein LOC643314 
WNK2                  0.019   WNK lysine deficient protein kinase 2 
TCOF1                 0.018   Treacher Collins-Franceschetti syndrome 1 isoform f...
TCOF1                 0.018   Treacher Collins-Franceschetti syndrome 1 isoform b ...
FLJ22184              0.017   PREDICTED: hypothetical protein LOC80164 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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