Guide to the Human Genome
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Search of human proteins with 149944560

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|149944560 forkhead box D4-like 2 [Homo sapiens]
         (416 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|149944560 forkhead box D4-like 2 [Homo sapiens]                    882   0.0  
gi|76880472 forkhead box D4-like 4 [Homo sapiens]                     882   0.0  
gi|187423902 forkhead box D4-like 5 [Homo sapiens]                    876   0.0  
gi|146262007 forkhead box D4-like 6 [Homo sapiens]                    857   0.0  
gi|157042770 forkhead box D4-like 3 [Homo sapiens]                    853   0.0  
gi|75677594 forkhead box D4 [Homo sapiens]                            702   0.0  
gi|18959276 forkhead box D4-like 1 [Homo sapiens]                     591   e-169
gi|134142824 forkhead box D2 [Homo sapiens]                           223   2e-58
gi|4758392 forkhead box D1 [Homo sapiens]                             221   7e-58
gi|6912372 forkhead box D3 [Homo sapiens]                             204   1e-52
gi|11386197 forkhead box E3 [Homo sapiens]                            180   2e-45
gi|21618325 forkhead box E1 [Homo sapiens]                            175   8e-44
gi|119395716 forkhead box C1 [Homo sapiens]                           162   4e-40
gi|22779860 forkhead box L1 [Homo sapiens]                            159   4e-39
gi|4885237 forkhead box C2 [Homo sapiens]                             157   2e-38
gi|28973785 forkhead box S1 [Homo sapiens]                            152   5e-37
gi|110735445 forkhead box F1 [Homo sapiens]                           151   1e-36
gi|61966923 forkhead box B2 [Homo sapiens]                            150   2e-36
gi|105554437 forkhead box B1 [Homo sapiens]                           149   6e-36
gi|4557595 forkhead box F2 [Homo sapiens]                             145   5e-35
gi|24497501 forkhead box A1 [Homo sapiens]                            142   7e-34
gi|208431824 forkhead box I3 [Homo sapiens]                           142   7e-34
gi|12751477 forkhead box L2 [Homo sapiens]                            141   1e-33
gi|24497506 forkhead box A3 [Homo sapiens]                            141   1e-33
gi|24497504 forkhead box A2 isoform 2 [Homo sapiens]                  139   5e-33
gi|194394143 forkhead box A2 isoform 1 [Homo sapiens]                 139   5e-33
gi|169171269 PREDICTED: similar to forkhead box L2 [Homo sapiens]     138   8e-33
gi|195947376 forkhead box I2 [Homo sapiens]                           137   2e-32
gi|169172132 PREDICTED: similar to forkhead box L2 [Homo sapiens]     135   7e-32
gi|113419423 PREDICTED: similar to forkhead box L2 [Homo sapiens]     135   7e-32

>gi|149944560 forkhead box D4-like 2 [Homo sapiens]
          Length = 416

 Score =  882 bits (2279), Expect = 0.0
 Identities = 416/416 (100%), Positives = 416/416 (100%)

Query: 1   MNLPRAERPRSTPQRSLRDSDGEDGKIDVLGEEEDEDEVEDEEEEARQQFLEQSLQPGLQ 60
           MNLPRAERPRSTPQRSLRDSDGEDGKIDVLGEEEDEDEVEDEEEEARQQFLEQSLQPGLQ
Sbjct: 1   MNLPRAERPRSTPQRSLRDSDGEDGKIDVLGEEEDEDEVEDEEEEARQQFLEQSLQPGLQ 60

Query: 61  VARWGGVALPREHIEGGGGPSDPSEFGTKFRAPPRSAAASEDARQPAKPPYSYIALITMA 120
           VARWGGVALPREHIEGGGGPSDPSEFGTKFRAPPRSAAASEDARQPAKPPYSYIALITMA
Sbjct: 61  VARWGGVALPREHIEGGGGPSDPSEFGTKFRAPPRSAAASEDARQPAKPPYSYIALITMA 120

Query: 121 ILQNPHKRLTLSGICAFISGRFPYYRRKFPAWQNSIRHNLSLNDCFVKIPREPGHPGKGN 180
           ILQNPHKRLTLSGICAFISGRFPYYRRKFPAWQNSIRHNLSLNDCFVKIPREPGHPGKGN
Sbjct: 121 ILQNPHKRLTLSGICAFISGRFPYYRRKFPAWQNSIRHNLSLNDCFVKIPREPGHPGKGN 180

Query: 181 YWSLDPASQDMFDNGSFLRRRKRFKRHQLTPGAHLPHPFPLPAAHAALHNPHPGPLLGAP 240
           YWSLDPASQDMFDNGSFLRRRKRFKRHQLTPGAHLPHPFPLPAAHAALHNPHPGPLLGAP
Sbjct: 181 YWSLDPASQDMFDNGSFLRRRKRFKRHQLTPGAHLPHPFPLPAAHAALHNPHPGPLLGAP 240

Query: 241 APPQPVPGAYPNTAPGRRPYALLHPHPLRYLLLSARVYAGAPKKAEGADLATPAPFPCCS 300
           APPQPVPGAYPNTAPGRRPYALLHPHPLRYLLLSARVYAGAPKKAEGADLATPAPFPCCS
Sbjct: 241 APPQPVPGAYPNTAPGRRPYALLHPHPLRYLLLSARVYAGAPKKAEGADLATPAPFPCCS 300

Query: 301 PHLVLSLGRRARVWRRHREADASLSALRVLCKGSGERVQGLRRVCPRPRGATATCSSDHQ 360
           PHLVLSLGRRARVWRRHREADASLSALRVLCKGSGERVQGLRRVCPRPRGATATCSSDHQ
Sbjct: 301 PHLVLSLGRRARVWRRHREADASLSALRVLCKGSGERVQGLRRVCPRPRGATATCSSDHQ 360

Query: 361 ACCIPKPLPLCCKCPPPLLLGQFCSNSSSIRRTAPTAALPPRARCWAGTCRPRRRC 416
           ACCIPKPLPLCCKCPPPLLLGQFCSNSSSIRRTAPTAALPPRARCWAGTCRPRRRC
Sbjct: 361 ACCIPKPLPLCCKCPPPLLLGQFCSNSSSIRRTAPTAALPPRARCWAGTCRPRRRC 416


>gi|76880472 forkhead box D4-like 4 [Homo sapiens]
          Length = 416

 Score =  882 bits (2279), Expect = 0.0
 Identities = 416/416 (100%), Positives = 416/416 (100%)

Query: 1   MNLPRAERPRSTPQRSLRDSDGEDGKIDVLGEEEDEDEVEDEEEEARQQFLEQSLQPGLQ 60
           MNLPRAERPRSTPQRSLRDSDGEDGKIDVLGEEEDEDEVEDEEEEARQQFLEQSLQPGLQ
Sbjct: 1   MNLPRAERPRSTPQRSLRDSDGEDGKIDVLGEEEDEDEVEDEEEEARQQFLEQSLQPGLQ 60

Query: 61  VARWGGVALPREHIEGGGGPSDPSEFGTKFRAPPRSAAASEDARQPAKPPYSYIALITMA 120
           VARWGGVALPREHIEGGGGPSDPSEFGTKFRAPPRSAAASEDARQPAKPPYSYIALITMA
Sbjct: 61  VARWGGVALPREHIEGGGGPSDPSEFGTKFRAPPRSAAASEDARQPAKPPYSYIALITMA 120

Query: 121 ILQNPHKRLTLSGICAFISGRFPYYRRKFPAWQNSIRHNLSLNDCFVKIPREPGHPGKGN 180
           ILQNPHKRLTLSGICAFISGRFPYYRRKFPAWQNSIRHNLSLNDCFVKIPREPGHPGKGN
Sbjct: 121 ILQNPHKRLTLSGICAFISGRFPYYRRKFPAWQNSIRHNLSLNDCFVKIPREPGHPGKGN 180

Query: 181 YWSLDPASQDMFDNGSFLRRRKRFKRHQLTPGAHLPHPFPLPAAHAALHNPHPGPLLGAP 240
           YWSLDPASQDMFDNGSFLRRRKRFKRHQLTPGAHLPHPFPLPAAHAALHNPHPGPLLGAP
Sbjct: 181 YWSLDPASQDMFDNGSFLRRRKRFKRHQLTPGAHLPHPFPLPAAHAALHNPHPGPLLGAP 240

Query: 241 APPQPVPGAYPNTAPGRRPYALLHPHPLRYLLLSARVYAGAPKKAEGADLATPAPFPCCS 300
           APPQPVPGAYPNTAPGRRPYALLHPHPLRYLLLSARVYAGAPKKAEGADLATPAPFPCCS
Sbjct: 241 APPQPVPGAYPNTAPGRRPYALLHPHPLRYLLLSARVYAGAPKKAEGADLATPAPFPCCS 300

Query: 301 PHLVLSLGRRARVWRRHREADASLSALRVLCKGSGERVQGLRRVCPRPRGATATCSSDHQ 360
           PHLVLSLGRRARVWRRHREADASLSALRVLCKGSGERVQGLRRVCPRPRGATATCSSDHQ
Sbjct: 301 PHLVLSLGRRARVWRRHREADASLSALRVLCKGSGERVQGLRRVCPRPRGATATCSSDHQ 360

Query: 361 ACCIPKPLPLCCKCPPPLLLGQFCSNSSSIRRTAPTAALPPRARCWAGTCRPRRRC 416
           ACCIPKPLPLCCKCPPPLLLGQFCSNSSSIRRTAPTAALPPRARCWAGTCRPRRRC
Sbjct: 361 ACCIPKPLPLCCKCPPPLLLGQFCSNSSSIRRTAPTAALPPRARCWAGTCRPRRRC 416


>gi|187423902 forkhead box D4-like 5 [Homo sapiens]
          Length = 416

 Score =  876 bits (2264), Expect = 0.0
 Identities = 414/416 (99%), Positives = 414/416 (99%)

Query: 1   MNLPRAERPRSTPQRSLRDSDGEDGKIDVLGEEEDEDEVEDEEEEARQQFLEQSLQPGLQ 60
           MNLPRAERPRSTPQRSLRDSDGEDGKIDVLGEEEDEDEVEDEEEEARQQFLEQSLQPGLQ
Sbjct: 1   MNLPRAERPRSTPQRSLRDSDGEDGKIDVLGEEEDEDEVEDEEEEARQQFLEQSLQPGLQ 60

Query: 61  VARWGGVALPREHIEGGGGPSDPSEFGTKFRAPPRSAAASEDARQPAKPPYSYIALITMA 120
           VARWGGVALPREHIEGGGGPSDPSEFGTKFRAPPRSAAASEDARQPAKPPYSYIALITMA
Sbjct: 61  VARWGGVALPREHIEGGGGPSDPSEFGTKFRAPPRSAAASEDARQPAKPPYSYIALITMA 120

Query: 121 ILQNPHKRLTLSGICAFISGRFPYYRRKFPAWQNSIRHNLSLNDCFVKIPREPGHPGKGN 180
           ILQNPHKRLTLSGICAFISGRFPYYRRKFPAWQNSIRHNLSLNDCFVKIPREPGHPGKGN
Sbjct: 121 ILQNPHKRLTLSGICAFISGRFPYYRRKFPAWQNSIRHNLSLNDCFVKIPREPGHPGKGN 180

Query: 181 YWSLDPASQDMFDNGSFLRRRKRFKRHQLTPGAHLPHPFPLPAAHAALHNPHPGPLLGAP 240
           YWSLDPASQDMFDNGSFLRRRKRFKRHQLTPGAHLPHPFPLPAAHAALHNPHPGPLLGAP
Sbjct: 181 YWSLDPASQDMFDNGSFLRRRKRFKRHQLTPGAHLPHPFPLPAAHAALHNPHPGPLLGAP 240

Query: 241 APPQPVPGAYPNTAPGRRPYALLHPHPLRYLLLSARVYAGAPKKAEGADLATPAPFPCCS 300
           APPQPVPGAYPNTAPGR PYALLHPHPLRYLLLSA VYAGAPKKAEGADLATPAPFPCCS
Sbjct: 241 APPQPVPGAYPNTAPGRCPYALLHPHPLRYLLLSAPVYAGAPKKAEGADLATPAPFPCCS 300

Query: 301 PHLVLSLGRRARVWRRHREADASLSALRVLCKGSGERVQGLRRVCPRPRGATATCSSDHQ 360
           PHLVLSLGRRARVWRRHREADASLSALRVLCKGSGERVQGLRRVCPRPRGATATCSSDHQ
Sbjct: 301 PHLVLSLGRRARVWRRHREADASLSALRVLCKGSGERVQGLRRVCPRPRGATATCSSDHQ 360

Query: 361 ACCIPKPLPLCCKCPPPLLLGQFCSNSSSIRRTAPTAALPPRARCWAGTCRPRRRC 416
           ACCIPKPLPLCCKCPPPLLLGQFCSNSSSIRRTAPTAALPPRARCWAGTCRPRRRC
Sbjct: 361 ACCIPKPLPLCCKCPPPLLLGQFCSNSSSIRRTAPTAALPPRARCWAGTCRPRRRC 416


>gi|146262007 forkhead box D4-like 6 [Homo sapiens]
          Length = 417

 Score =  857 bits (2213), Expect = 0.0
 Identities = 408/417 (97%), Positives = 409/417 (98%), Gaps = 1/417 (0%)

Query: 1   MNLPRAERPRSTPQRSLRDSDGEDGKIDVLGEEEDEDEVEDEEEEARQQFLEQSLQPGLQ 60
           MNLPRAER RSTPQRSLRDSDGEDGKIDVLGEEEDEDEVEDEEE A QQFLEQSLQPGLQ
Sbjct: 1   MNLPRAERLRSTPQRSLRDSDGEDGKIDVLGEEEDEDEVEDEEEAASQQFLEQSLQPGLQ 60

Query: 61  VARWGGVALPREHIEGGGGPSDPSEFGTKFRAPPRSAAASEDARQPAKPPYSYIALITMA 120
           VARWGGVALPREHIEGGGGPSDPSEFGTKFRAPPRSAAASEDARQPAKPPYSYIALITMA
Sbjct: 61  VARWGGVALPREHIEGGGGPSDPSEFGTKFRAPPRSAAASEDARQPAKPPYSYIALITMA 120

Query: 121 ILQNPHKRLTLSGICAFISGRFPYYRRKFPAWQNSIRHNLSLNDCFVKIPREPGHPGKGN 180
           ILQNPHKRLTLSGICAFISGRFPYYRRKFPAWQNSIRHNLSLNDCFVKIPREPGHPGKGN
Sbjct: 121 ILQNPHKRLTLSGICAFISGRFPYYRRKFPAWQNSIRHNLSLNDCFVKIPREPGHPGKGN 180

Query: 181 YWSLDPASQDMFDNGSFLRRRKRFKRHQLTPGAHLPHPFPLPAAHAALHNPHPGPLLGAP 240
           YWSLDPASQDMFDNGSFLRRRKRFKRHQLTPGAHLPHPFPLPAAHAALHNPHPGPLLGAP
Sbjct: 181 YWSLDPASQDMFDNGSFLRRRKRFKRHQLTPGAHLPHPFPLPAAHAALHNPHPGPLLGAP 240

Query: 241 APPQPVPGAYPNTAPGRRPYALLHPHPLRYLLLSARVYAGAPKKAEGADLATPAPFPCCS 300
           APPQPVPGAYPNTAPGRRPYALLHPHPLRYLLLSA VYAGAPKKAEGA LATPAPFPCCS
Sbjct: 241 APPQPVPGAYPNTAPGRRPYALLHPHPLRYLLLSAPVYAGAPKKAEGAALATPAPFPCCS 300

Query: 301 PHLVLSLGRRARVWRRHREADASLSALRVLCKGSGERVQGLRRVCPRPRGATATCSSDHQ 360
           PHLVLSLGRRARVWRRHREADASLSALRVLCKGSGERVQGLRRVCPRPRGATATCSSDHQ
Sbjct: 301 PHLVLSLGRRARVWRRHREADASLSALRVLCKGSGERVQGLRRVCPRPRGATATCSSDHQ 360

Query: 361 ACCIPKPLPLCCKCPPPLLLGQFCSNSSSI-RRTAPTAALPPRARCWAGTCRPRRRC 416
           ACCIP+PLPLCCKCPPP LLGQFCSNSSSI RRTAPTAALPPRARCWAGTCRPRR C
Sbjct: 361 ACCIPRPLPLCCKCPPPPLLGQFCSNSSSIRRRTAPTAALPPRARCWAGTCRPRRPC 417


>gi|157042770 forkhead box D4-like 3 [Homo sapiens]
          Length = 417

 Score =  853 bits (2204), Expect = 0.0
 Identities = 406/417 (97%), Positives = 408/417 (97%), Gaps = 1/417 (0%)

Query: 1   MNLPRAERPRSTPQRSLRDSDGEDGKIDVLGEEEDEDEVEDEEEEARQQFLEQSLQPGLQ 60
           MNLPRAER RSTPQRSLRDSDGEDGKIDVLGEEEDEDEVEDEEE A QQFLEQSLQPGLQ
Sbjct: 1   MNLPRAERLRSTPQRSLRDSDGEDGKIDVLGEEEDEDEVEDEEEAASQQFLEQSLQPGLQ 60

Query: 61  VARWGGVALPREHIEGGGGPSDPSEFGTKFRAPPRSAAASEDARQPAKPPYSYIALITMA 120
           VARWGGVALPREHIEGGGGPSDPSEFGTKFRAPPRSAAASEDARQPAKPPYSYIALITMA
Sbjct: 61  VARWGGVALPREHIEGGGGPSDPSEFGTKFRAPPRSAAASEDARQPAKPPYSYIALITMA 120

Query: 121 ILQNPHKRLTLSGICAFISGRFPYYRRKFPAWQNSIRHNLSLNDCFVKIPREPGHPGKGN 180
           ILQNPHKRLTLSGICAFISGRFPYYRRKFPAWQNSIRHNLSLNDCFVKIPREPGHPGKGN
Sbjct: 121 ILQNPHKRLTLSGICAFISGRFPYYRRKFPAWQNSIRHNLSLNDCFVKIPREPGHPGKGN 180

Query: 181 YWSLDPASQDMFDNGSFLRRRKRFKRHQLTPGAHLPHPFPLPAAHAALHNPHPGPLLGAP 240
           YWSLDPASQDMFDNGSFLRRRKRFKRHQLTPGAHLPHPFPLPAAHAALHNP PGPLLGAP
Sbjct: 181 YWSLDPASQDMFDNGSFLRRRKRFKRHQLTPGAHLPHPFPLPAAHAALHNPRPGPLLGAP 240

Query: 241 APPQPVPGAYPNTAPGRRPYALLHPHPLRYLLLSARVYAGAPKKAEGADLATPAPFPCCS 300
           APPQPVPGAYPNTAPGRRPYALLHPHPLRYLLLSA VYAGAPKKAEGA LATPAPFPCCS
Sbjct: 241 APPQPVPGAYPNTAPGRRPYALLHPHPLRYLLLSAPVYAGAPKKAEGAALATPAPFPCCS 300

Query: 301 PHLVLSLGRRARVWRRHREADASLSALRVLCKGSGERVQGLRRVCPRPRGATATCSSDHQ 360
           PHLVLSLGRRARVWRRHREADASLSALRVLCKGSGERVQGLRR+CPRPRGATATCSSDHQ
Sbjct: 301 PHLVLSLGRRARVWRRHREADASLSALRVLCKGSGERVQGLRRICPRPRGATATCSSDHQ 360

Query: 361 ACCIPKPLPLCCKCPPPLLLGQFCSNSSSI-RRTAPTAALPPRARCWAGTCRPRRRC 416
           ACCIP+PLPLCCKCPPP LLGQFCSNSSSI RRTAPTAALPPRARCWAGTCRPRR C
Sbjct: 361 ACCIPRPLPLCCKCPPPPLLGQFCSNSSSIRRRTAPTAALPPRARCWAGTCRPRRPC 417


>gi|75677594 forkhead box D4 [Homo sapiens]
          Length = 439

 Score =  702 bits (1813), Expect = 0.0
 Identities = 340/362 (93%), Positives = 343/362 (94%), Gaps = 4/362 (1%)

Query: 1   MNLPRAERPRSTPQRSLRDSDGEDGKIDVLGEEEDEDEVEDEEEEARQQFLEQSLQPGLQ 60
           MNLPRAER RSTPQRSLRDSDGEDGKIDVLGEEEDEDE    EE A QQFLEQSLQPGLQ
Sbjct: 1   MNLPRAERLRSTPQRSLRDSDGEDGKIDVLGEEEDEDE----EEAASQQFLEQSLQPGLQ 56

Query: 61  VARWGGVALPREHIEGGGGPSDPSEFGTKFRAPPRSAAASEDARQPAKPPYSYIALITMA 120
           VARWGGVALPREHIEGGGGPSDPSEFGT+FRAPPRSAAASEDARQPAKPP SYIALITMA
Sbjct: 57  VARWGGVALPREHIEGGGGPSDPSEFGTEFRAPPRSAAASEDARQPAKPPSSYIALITMA 116

Query: 121 ILQNPHKRLTLSGICAFISGRFPYYRRKFPAWQNSIRHNLSLNDCFVKIPREPGHPGKGN 180
           ILQ+PHKRLTLSGICAFIS RFPYYRRKFPAWQNSIRHNLSLNDCFVKIPREPG PGKGN
Sbjct: 117 ILQSPHKRLTLSGICAFISDRFPYYRRKFPAWQNSIRHNLSLNDCFVKIPREPGRPGKGN 176

Query: 181 YWSLDPASQDMFDNGSFLRRRKRFKRHQLTPGAHLPHPFPLPAAHAALHNPHPGPLLGAP 240
           YWSLDPASQDMFDNGSFLRRRKRF+RHQ TPGAHLPHPFPLPAAHAALHNP PGPLLGAP
Sbjct: 177 YWSLDPASQDMFDNGSFLRRRKRFQRHQPTPGAHLPHPFPLPAAHAALHNPRPGPLLGAP 236

Query: 241 APPQPVPGAYPNTAPGRRPYALLHPHPLRYLLLSARVYAGAPKKAEGADLATPAPFPCCS 300
           APPQPVPGAYPNT PGRRPYALLHPHP RYLLLSA  YAGAPKKAEGADLATPAPFPCCS
Sbjct: 237 APPQPVPGAYPNTGPGRRPYALLHPHPPRYLLLSAPAYAGAPKKAEGADLATPAPFPCCS 296

Query: 301 PHLVLSLGRRARVWRRHREADASLSALRVLCKGSGERVQGLRRVCPRPRGATATCSSDHQ 360
           PHLVLSLGRRARVWRRHREADASLSALRV CKGSGERVQGLRRVCPRPRGATA CSSD Q
Sbjct: 297 PHLVLSLGRRARVWRRHREADASLSALRVSCKGSGERVQGLRRVCPRPRGATAPCSSDRQ 356

Query: 361 AC 362
           AC
Sbjct: 357 AC 358


>gi|18959276 forkhead box D4-like 1 [Homo sapiens]
          Length = 408

 Score =  591 bits (1524), Expect = e-169
 Identities = 285/303 (94%), Positives = 288/303 (95%), Gaps = 1/303 (0%)

Query: 1   MNLPRAERPRSTPQRSLRDSDGEDGKIDVLGEEEDEDEVEDEEEEARQQFLEQSLQPGLQ 60
           MNLPRAERPRSTPQRSLRDSDGEDGKIDVLGEEEDEDEVEDEEEEA Q+FLEQSLQPGLQ
Sbjct: 1   MNLPRAERPRSTPQRSLRDSDGEDGKIDVLGEEEDEDEVEDEEEEASQKFLEQSLQPGLQ 60

Query: 61  VARWGGVALPREHIEGGGGPSDPSEFGTKFRAPPRSAAASEDARQPAKPPYSYIALITMA 120
           VARWGGVALPREHIEGGG PSDPSEFGT+FRAPPRSAAASEDARQPAKPPYSYIALITMA
Sbjct: 61  VARWGGVALPREHIEGGG-PSDPSEFGTEFRAPPRSAAASEDARQPAKPPYSYIALITMA 119

Query: 121 ILQNPHKRLTLSGICAFISGRFPYYRRKFPAWQNSIRHNLSLNDCFVKIPREPGHPGKGN 180
           ILQ+PHKRLTLSGICAFISGRFPYYRRKFPAWQNSIRHNLSLNDCFVKIPREPGHPGKG 
Sbjct: 120 ILQSPHKRLTLSGICAFISGRFPYYRRKFPAWQNSIRHNLSLNDCFVKIPREPGHPGKGT 179

Query: 181 YWSLDPASQDMFDNGSFLRRRKRFKRHQLTPGAHLPHPFPLPAAHAALHNPHPGPLLGAP 240
           YWSLDPASQDMFDNGSFLRRRKRFKRHQLTPGAHLPHPFPLPAAHAALHNP PGPLLGAP
Sbjct: 180 YWSLDPASQDMFDNGSFLRRRKRFKRHQLTPGAHLPHPFPLPAAHAALHNPRPGPLLGAP 239

Query: 241 APPQPVPGAYPNTAPGRRPYALLHPHPLRYLLLSARVYAGAPKKAEGADLATPAPFPCCS 300
           A PQPVPGAYPNTAPGRRPYALLHPHP RYLLLSA  YAGAPKKAEGADLATP   P   
Sbjct: 240 ALPQPVPGAYPNTAPGRRPYALLHPHPPRYLLLSAPAYAGAPKKAEGADLATPGTLPVLQ 299

Query: 301 PHL 303
           P L
Sbjct: 300 PSL 302


>gi|134142824 forkhead box D2 [Homo sapiens]
          Length = 495

 Score =  223 bits (568), Expect = 2e-58
 Identities = 142/288 (49%), Positives = 152/288 (52%), Gaps = 48/288 (16%)

Query: 32  EEEDEDEVEDEEEEARQQFLEQSLQPGLQVARWGGVALPREHIEGGGGPSDPSEFGTKFR 91
           EE + D  EDEEE       E         A   G   P      G     P        
Sbjct: 61  EEAEADLAEDEEESGGCSDGEPRALASRGAAAAAGSPGPGAAAARGAAGPGPG------- 113

Query: 92  APPRSAAASEDARQP-AKPPYSYIALITMAILQNPHKRLTLSGICAFISGRFPYYRRKFP 150
            PP   AA+   R P  KPPYSYIALITMAILQ+P KRLTLS IC FISGRFPYYR KFP
Sbjct: 114 -PPSGGAAT---RSPLVKPPYSYIALITMAILQSPKKRLTLSEICEFISGRFPYYREKFP 169

Query: 151 AWQNSIRHNLSLNDCFVKIPREPGHPGKGNYWSLDPASQDMFDNGSFLRRRKRFKRHQLT 210
           AWQNSIRHNLSLNDCFVKIPREPG+PGKGNYW+LDP S DMFDNGSFLRRRKRFKR  L 
Sbjct: 170 AWQNSIRHNLSLNDCFVKIPREPGNPGKGNYWTLDPESADMFDNGSFLRRRKRFKRQPLP 229

Query: 211 PGAHLPHPFPLPAAHAALHNPHPGPLL--GAPAPPQP---VPG----------------A 249
           P    PHP P         +PHP  LL  GA A   P   +PG                A
Sbjct: 230 P----PHPHP---------HPHPELLLRGGAAAAGDPGAFLPGFAAYGAYGYGYGLALPA 276

Query: 250 YPNTAPGRRPYALLHPHPLRYLLLSARVYAGAPKKAEGADLATPAPFP 297
           Y    PG  P+   HPHP  +   +A   A           A P P P
Sbjct: 277 YGAPPPGPAPHP--HPHPHAFAFAAAAAAAPCQLSVPPGRAAAPPPGP 322


>gi|4758392 forkhead box D1 [Homo sapiens]
          Length = 465

 Score =  221 bits (564), Expect = 7e-58
 Identities = 164/381 (43%), Positives = 187/381 (49%), Gaps = 37/381 (9%)

Query: 36  EDEVEDEEEEARQQFLEQSLQPGLQVARWGGVALPREHIEGGGGPSDPSEFGTKFRAPPR 95
           EDE+ED EEE     +  +   G   A  G          GGGG       G+       
Sbjct: 62  EDELEDLEEEEDDDDILLAPPAGGSPAPPGPAPAAGAGAGGGGGGGGAGGGGS------- 114

Query: 96  SAAASEDARQP-AKPPYSYIALITMAILQNPHKRLTLSGICAFISGRFPYYRRKFPAWQN 154
              A   A+ P  KPPYSYIALITMAILQ+P KRLTLS IC FISGRFPYYR KFPAWQN
Sbjct: 115 ---AGSGAKNPLVKPPYSYIALITMAILQSPKKRLTLSEICEFISGRFPYYREKFPAWQN 171

Query: 155 SIRHNLSLNDCFVKIPREPGHPGKGNYWSLDPASQDMFDNGSFLRRRKRFKRHQ-LTPGA 213
           SIRHNLSLNDCFVKIPREPG+PGKGNYW+LDP S DMFDNGSFLRRRKRFKR   L P A
Sbjct: 172 SIRHNLSLNDCFVKIPREPGNPGKGNYWTLDPESADMFDNGSFLRRRKRFKRQPLLPPNA 231

Query: 214 HLPHPFPLPAAHAA--LHNPHPGPLLGAPAPPQPVPGAYPNTAPGRRPYALLHPHPLRYL 271
                  L  A AA    +P     L  PAPP P P AY     G  PY   +   L   
Sbjct: 232 AAAESLLLRGAGAAGGAGDPAAAAALFPPAPPPP-PHAY-----GYGPYGCGYGLQLPPY 285

Query: 272 LLSARVYAGAPKKAEGADLATPAPFPCCSPH-LVLSLGRRARVWRRHREADASLSALRV- 329
              + ++A A   A  A     +P P   PH     L R A  +R H    A    L   
Sbjct: 286 APPSALFAAAAAAAAAAAFHPHSPPPPPPPHGAAAELARTAFGYRPHPLGAALPGPLPAS 345

Query: 330 LCKGSGERVQGLRR-------VCPRPRGATATCSSDHQACCI----PKPLPLCCKCPPPL 378
             K  G     L R       +     G  A  ++  QA       P P P+    P P 
Sbjct: 346 AAKAGGPGASALARSPFSIESIIGGSLGPAAAAAAAAQAAAAAQASPSPSPVAAP-PAPG 404

Query: 379 LLGQFCSNSSSIRRTAPTAAL 399
             G  C+  +++    P AAL
Sbjct: 405 SSGGGCAAQAAV---GPAAAL 422


>gi|6912372 forkhead box D3 [Homo sapiens]
          Length = 478

 Score =  204 bits (519), Expect = 1e-52
 Identities = 117/225 (52%), Positives = 130/225 (57%), Gaps = 32/225 (14%)

Query: 65  GGVALPREHIEGGGGPSDPSEFGTKFRAPPRSAAASEDARQPAKPPYSYIALITMAILQN 124
           GGV        GGG  +     G    + P+++          KPPYSYIALITMAILQ+
Sbjct: 106 GGVGGEEGGASGGGPGAGSGSAGGLAPSKPKNSLV--------KPPYSYIALITMAILQS 157

Query: 125 PHKRLTLSGICAFISGRFPYYRRKFPAWQNSIRHNLSLNDCFVKIPREPGHPGKGNYWSL 184
           P K+LTLSGIC FIS RFPYYR KFPAWQNSIRHNLSLNDCFVKIPREPG+PGKGNYW+L
Sbjct: 158 PQKKLTLSGICEFISNRFPYYREKFPAWQNSIRHNLSLNDCFVKIPREPGNPGKGNYWTL 217

Query: 185 DPASQDMFDNGSFLRRRKRFKRHQ---------------------LTPGAHLPHPFPL-- 221
           DP S+DMFDNGSFLRRRKRFKRHQ                        GA  P+  P   
Sbjct: 218 DPQSEDMFDNGSFLRRRKRFKRHQQEHLREQTALMMQSFGAYSLAAAAGAAGPYGRPYGL 277

Query: 222 -PAAHAALHNPHPGPLLGAPAPPQPVPGAYPNTAPGRRPYALLHP 265
            PAA A  ++        A A     P A P  AP   P   L P
Sbjct: 278 HPAAAAGAYSHPAAAAAAAAAAALQYPYALPPVAPVLPPAVPLLP 322


>gi|11386197 forkhead box E3 [Homo sapiens]
          Length = 319

 Score =  180 bits (456), Expect = 2e-45
 Identities = 115/257 (44%), Positives = 135/257 (52%), Gaps = 51/257 (19%)

Query: 65  GGVALPREHIEGGGGPSDPSEFGTKFRAPPRSAAASEDAR---------------QPAKP 109
           G  ALP   +   G P  P       R P  +AA   +A                Q  KP
Sbjct: 15  GFPALPA--VAPSGPPPSPLAGAEPGREPEEAAAGRGEAAPTPAPGPGRRRRRPLQRGKP 72

Query: 110 PYSYIALITMAILQNPHKRLTLSGICAFISGRFPYYRRKFPAWQNSIRHNLSLNDCFVKI 169
           PYSYIALI MA+   P +RLTL+ I  FI+ RF +YR     WQNSIRHNL+LNDCFVK+
Sbjct: 73  PYSYIALIAMALAHAPGRRLTLAAIYRFITERFAFYRDSPRKWQNSIRHNLTLNDCFVKV 132

Query: 170 PREPGHPGKGNYWSLDPASQDMFDNGSFLRRRKRFKRHQL------TPGAHLPHPFPLPA 223
           PREPG+PGKGNYW+LDPA+ DMFDNGSFLRRRKRFKR +L       PG  LP P+    
Sbjct: 133 PREPGNPGKGNYWTLDPAAADMFDNGSFLRRRKRFKRAELPAHAAAAPGPPLPFPY---- 188

Query: 224 AHAALHNPHPGPLLGAPAPPQPVPGAYPNTAPGRRPYALLHPHPLRYLLLSARVYAGAPK 283
              A + P PGP L  P PP   PG  P               P R   + + V      
Sbjct: 189 ---APYAPAPGPALLVP-PPSAGPGPSP---------------PARLFSVDSLVNL---- 225

Query: 284 KAEGADLATPAPFPCCS 300
           + E A L  P P PCC+
Sbjct: 226 QPELAGLGAPEP-PCCA 241


>gi|21618325 forkhead box E1 [Homo sapiens]
          Length = 373

 Score =  175 bits (443), Expect = 8e-44
 Identities = 108/228 (47%), Positives = 127/228 (55%), Gaps = 15/228 (6%)

Query: 72  EHIEGGGGPSDPSEFGTKFRAPPRSAAASEDARQPAKPPYSYIALITMAILQNPHKRLTL 131
           E   G G P + +  G   R   R         Q  KPPYSYIALI MAI   P +RLTL
Sbjct: 24  ETAAGAGVPGEATGRGAGGRRRKRPL-------QRGKPPYSYIALIAMAIAHAPERRLTL 76

Query: 132 SGICAFISGRFPYYRRKFPAWQNSIRHNLSLNDCFVKIPREPGHPGKGNYWSLDPASQDM 191
            GI  FI+ RFP+YR     WQNSIRHNL+LNDCF+KIPRE G PGKGNYW+LDP ++DM
Sbjct: 77  GGIYKFITERFPFYRDNPKKWQNSIRHNLTLNDCFLKIPREAGRPGKGNYWALDPNAEDM 136

Query: 192 FDNGSFLRRRKRFKRHQLTPGAHLPHPFPLPAAHAALHNPHPGPLLGA-PAPPQPVPGAY 250
           F++GSFLRRRKRFKR  L+      H     AA AA          GA PA   P PGA 
Sbjct: 137 FESGSFLRRRKRFKRSDLSTYPAYMHDAAAAAAAAAAAAAAAAIFPGAVPAARPPYPGA- 195

Query: 251 PNTAPGRRPYALLHPHPLRYLLLS---ARVYAGAPKKAEGADLATPAP 295
                G  P +L  P P+ Y   S    RV+   P++    +L  PAP
Sbjct: 196 --VYAGYAPPSLAAPPPVYYPAASPGPCRVFGLVPERPLSPELG-PAP 240


>gi|119395716 forkhead box C1 [Homo sapiens]
          Length = 553

 Score =  162 bits (411), Expect = 4e-40
 Identities = 96/224 (42%), Positives = 116/224 (51%), Gaps = 30/224 (13%)

Query: 108 KPPYSYIALITMAILQNPHKRLTLSGICAFISGRFPYYRRKFPAWQNSIRHNLSLNDCFV 167
           KPPYSYIALITMAI   P K++TL+GI  FI  RFP+YR     WQNSIRHNLSLN+CFV
Sbjct: 78  KPPYSYIALITMAIQNAPDKKITLNGIYQFIMDRFPFYRDNKQGWQNSIRHNLSLNECFV 137

Query: 168 KIPREPGHPGKGNYWSLDPASQDMFDNGSFLRRRKRFKRHQLT---------------PG 212
           K+PR+   PGKG+YW+LDP S +MF+NGSFLRRR+RFK+                   P 
Sbjct: 138 KVPRDDKKPGKGSYWTLDPDSYNMFENGSFLRRRRRFKKKDAVKDKEEKDRLHLKEPPPP 197

Query: 213 AHLPHPFPLPAAHAALHNPHPGPLL---------GAPAPPQPV-PGAYPNTAPGRRPYAL 262
              P P P   A      P P P+            P+PPQP+ P A   +        +
Sbjct: 198 GRQPPPAPPEQADGNAPGPQPPPVRIQDIKTENGTCPSPPQPLSPAAALGSGSAAAVPKI 257

Query: 263 LHPHPLRYLLLSARVYAGA-----PKKAEGADLATPAPFPCCSP 301
             P      L S     G+     P   +GAD A P P P   P
Sbjct: 258 ESPDSSSSSLSSGSSPPGSLPSARPLSLDGADSAPPPPAPSAPP 301


>gi|22779860 forkhead box L1 [Homo sapiens]
          Length = 345

 Score =  159 bits (402), Expect = 4e-39
 Identities = 96/211 (45%), Positives = 115/211 (54%), Gaps = 27/211 (12%)

Query: 68  ALPREHIEGGGGPSDPSEFGTKFRAPPRSAAASEDARQPAKPPYSYIALITMAILQNPHK 127
           A P  ++ G   P  P  F     AP  + AAS  A  P KPPYSYIALI MAI   P +
Sbjct: 14  ASPMLYLYGPERPGLPLAF-----APAAALAASGRAETPQKPPYSYIALIAMAIQDAPEQ 68

Query: 128 RLTLSGICAFISGRFPYYRRKFPAWQNSIRHNLSLNDCFVKIPREPGHPGKGNYWSLDPA 187
           R+TL+GI  FI  RFP+Y      WQNSIRHNLSLNDCFVK+PRE G PGKG+YW+LDP 
Sbjct: 69  RVTLNGIYQFIMDRFPFYHDNRQGWQNSIRHNLSLNDCFVKVPREKGRPGKGSYWTLDPR 128

Query: 188 SQDMFDNGSFLRRRKRFKRHQLTPGAHLP---------HPFPLPAAHAALHNP------- 231
             DMF+NG++ RR+++ K     P A  P            P   + A    P       
Sbjct: 129 CLDMFENGNYRRRKRKPKPGPGAPEAKRPRAETHQRSAEAQPEAGSGAGGSGPAISRLQA 188

Query: 232 ---HPGPLLGAPAPPQPV--PG-AYPNTAPG 256
               P PLL  P+PP P+  PG A PN   G
Sbjct: 189 APAGPSPLLDGPSPPAPLHWPGTASPNEDAG 219


>gi|4885237 forkhead box C2 [Homo sapiens]
          Length = 501

 Score =  157 bits (396), Expect = 2e-38
 Identities = 110/321 (34%), Positives = 138/321 (42%), Gaps = 55/321 (17%)

Query: 108 KPPYSYIALITMAILQNPHKRLTLSGICAFISGRFPYYRRKFPAWQNSIRHNLSLNDCFV 167
           KPPYSYIALITMAI   P K++TL+GI  FI  RFP+YR     WQNSIRHNLSLN+CFV
Sbjct: 72  KPPYSYIALITMAIQNAPEKKITLNGIYQFIMDRFPFYRENKQGWQNSIRHNLSLNECFV 131

Query: 168 KIPREPGHPGKGNYWSLDPASQDMFDNGSFLRRRKRFKRHQLTPGAHLPHPFPLPAAHAA 227
           K+PR+   PGKG+YW+LDP S +MF+NGSFLRRR+RFK+  ++               A 
Sbjct: 132 KVPRDDKKPGKGSYWTLDPDSYNMFENGSFLRRRRRFKKKDVSKEKE---------ERAH 182

Query: 228 LHNPHPGPLLGAPAPPQPVPGAYPNTAPGRRPYALLHPHPLRYLLLSARVYAGAPKKAE- 286
           L  P P    GAPA P                                   A APK+AE 
Sbjct: 183 LKEPPPAASKGAPATPH---------------------------------LADAPKEAEK 209

Query: 287 ----GADLATPA-----PFPCCSPHLVLSLGRRARVWRRHREADASLSALRVLCKGS--G 335
                ++ A+PA          SP   L    R+         D SL            G
Sbjct: 210 KVVIKSEAASPALPVITKVETLSPESALQGSPRSAASTPAGSPDGSLPEHHAAAPNGLPG 269

Query: 336 ERVQGLRRVCPRPRGATATCSSDHQACCIPKPLPLCCKCPPPLLLGQFCSNSSSIRRTAP 395
             V+ +  +   P G   +  +      +P PL L     PP   GQ C+          
Sbjct: 270 FSVENIMTLRTSPPGGELSPGAGRAGLVVP-PLALPYAAAPPAAYGQPCAQGLEAGAAGG 328

Query: 396 TAALPPRARCWAGTCRPRRRC 416
                     + G  RP   C
Sbjct: 329 YQCSMRAMSLYTGAERPAHMC 349


>gi|28973785 forkhead box S1 [Homo sapiens]
          Length = 330

 Score =  152 bits (384), Expect = 5e-37
 Identities = 70/112 (62%), Positives = 83/112 (74%)

Query: 105 QPAKPPYSYIALITMAILQNPHKRLTLSGICAFISGRFPYYRRKFPAWQNSIRHNLSLND 164
           +P KPPYSYIALI MAI  +P +R TLSGI  +I GRF +YR   P WQNSIRHNLSLN+
Sbjct: 15  EPTKPPYSYIALIAMAIQSSPGQRATLSGIYRYIMGRFAFYRHNRPGWQNSIRHNLSLNE 74

Query: 165 CFVKIPREPGHPGKGNYWSLDPASQDMFDNGSFLRRRKRFKRHQLTPGAHLP 216
           CFVK+PR+   PGKG+YW+LDP   DMF++GSFLRRR+RF R     G   P
Sbjct: 75  CFVKVPRDDRKPGKGSYWTLDPDCHDMFEHGSFLRRRRRFTRQTGAEGTRGP 126


>gi|110735445 forkhead box F1 [Homo sapiens]
          Length = 379

 Score =  151 bits (381), Expect = 1e-36
 Identities = 69/131 (52%), Positives = 92/131 (70%), Gaps = 5/131 (3%)

Query: 76  GGGGPSDPSEFGTKFRAPPRSAAASEDARQPAKPPYSYIALITMAILQNPHKRLTLSGIC 135
           GGG   DP+  G     P ++   +   R+P KPPYSYIALI MAI  +P KRLTLS I 
Sbjct: 21  GGGAAMDPASSG-----PSKAKKTNAGIRRPEKPPYSYIALIVMAIQSSPTKRLTLSEIY 75

Query: 136 AFISGRFPYYRRKFPAWQNSIRHNLSLNDCFVKIPREPGHPGKGNYWSLDPASQDMFDNG 195
            F+  RFP++R  +  W+NS+RHNLSLN+CF+K+P+  G PGKG+YW++DPAS+ MF+ G
Sbjct: 76  QFLQSRFPFFRGSYQGWKNSVRHNLSLNECFIKLPKGLGRPGKGHYWTIDPASEFMFEEG 135

Query: 196 SFLRRRKRFKR 206
           SF RR + F+R
Sbjct: 136 SFRRRPRGFRR 146


>gi|61966923 forkhead box B2 [Homo sapiens]
          Length = 432

 Score =  150 bits (380), Expect = 2e-36
 Identities = 90/186 (48%), Positives = 100/186 (53%), Gaps = 28/186 (15%)

Query: 108 KPPYSYIALITMAILQNPHKRLTLSGICAFISGRFPYYRRKFPAWQNSIRHNLSLNDCFV 167
           KPPYSYI+L  MAI  +  K L LS I  FI  RFPYYR     WQNS+RHNLS NDCF+
Sbjct: 13  KPPYSYISLTAMAIQHSAEKMLPLSDIYKFIMERFPYYREHTQRWQNSLRHNLSFNDCFI 72

Query: 168 KIPREPGHPGKGNYWSLDPASQDMFDNGSFLRRRKRFK--RHQLT--------------P 211
           KIPR P  PGKG++W+L P   DMF+NGSFLRRRKRFK  R   T              P
Sbjct: 73  KIPRRPDQPGKGSFWALHPDCGDMFENGSFLRRRKRFKVLRADHTHLHAGSTKSAPGAGP 132

Query: 212 GAHL-PHPFPLPAAH-----AALHNPHPGPLLGAPAPPQPVP------GAYPNTAPGRRP 259
           G HL PH    P  H     AA H+ H  P    P PP P P         P TAP   P
Sbjct: 133 GGHLHPHHHHHPHHHHHHHAAAHHHHHHHPPQPPPPPPPPPPHMVHYFHQQPPTAPQPPP 192

Query: 260 YALLHP 265
           +    P
Sbjct: 193 HLPSQP 198


>gi|105554437 forkhead box B1 [Homo sapiens]
          Length = 325

 Score =  149 bits (375), Expect = 6e-36
 Identities = 112/323 (34%), Positives = 146/323 (45%), Gaps = 44/323 (13%)

Query: 108 KPPYSYIALITMAILQNPHKRLTLSGICAFISGRFPYYRRKFPAWQNSIRHNLSLNDCFV 167
           KPPYSYI+L  MAI  +P K L LS I  FI  RFPYYR     WQNS+RHNLS NDCF+
Sbjct: 13  KPPYSYISLTAMAIQSSPEKMLPLSEIYKFIMDRFPYYRENTQRWQNSLRHNLSFNDCFI 72

Query: 168 KIPREPGHPGKGNYWSLDPASQDMFDNGSFLRRRKRFKRHQLTPGAHLPHPFPLPAAHAA 227
           KIPR P  PGKG++W+L P+  DMF+NGSFLRRRKRFK   +    HL    P   A AA
Sbjct: 73  KIPRRPDQPGKGSFWALHPSCGDMFENGSFLRRRKRFK---VLKSDHLA---PSKPADAA 126

Query: 228 LHNPHPGPL----LGAPAPPQP-VPGAYPNTAPGRRPYALLHPHPLRYLLLSARVYAGAP 282
            +      L    L A     P +P A  N     +P    HP  +  ++  AR Y    
Sbjct: 127 QYLQQQAKLRLSALAASGTHLPQMPAAAYNLGGVAQPSGFKHPFAIENII--AREYKMPG 184

Query: 283 KKAEGADLATPAPFPCCSPHLVLSLGRRARVWRRHREADASL------------------ 324
             A  A    PA +P   P+ + ++G        H    A +                  
Sbjct: 185 GLAFSAMQPVPAAYPL--PNQLTTMGSSLGTGWPHVYGSAGMIDSATPISMASGDYSAYG 242

Query: 325 SALRVLCKGSGERVQGLR-RVCPRPRGATATCSSDHQACCIPKPLPLCCKCPPPLL---L 380
             L+ LC  +G+ +  +   + P P    A  +       +P P+P      PP L    
Sbjct: 243 VPLKPLCHAAGQTLPAIPVPIKPTPAAVPALPA-------LPAPIPTLLSNSPPSLSPTS 295

Query: 381 GQFCSNSSSIRRTAPTAALPPRA 403
            Q  ++ SS    + T   P  A
Sbjct: 296 SQTATSQSSPATPSETLTSPASA 318


>gi|4557595 forkhead box F2 [Homo sapiens]
          Length = 444

 Score =  145 bits (367), Expect = 5e-35
 Identities = 69/130 (53%), Positives = 89/130 (68%), Gaps = 8/130 (6%)

Query: 77  GGGPSDPSEFGTKFRAPPRSAAASEDARQPAKPPYSYIALITMAILQNPHKRLTLSGICA 136
           GGG +     G K         AS   R+P KPPYSYIALI MAI  +P KRLTLS I  
Sbjct: 77  GGGGAGAGSGGAK--------KASSGLRRPEKPPYSYIALIVMAIQSSPSKRLTLSEIYQ 128

Query: 137 FISGRFPYYRRKFPAWQNSIRHNLSLNDCFVKIPREPGHPGKGNYWSLDPASQDMFDNGS 196
           F+  RFP++R  +  W+NS+RHNLSLN+CF+K+P+  G PGKG+YW++DPAS+ MF+ GS
Sbjct: 129 FLQARFPFFRGAYQGWKNSVRHNLSLNECFIKLPKGLGRPGKGHYWTIDPASEFMFEEGS 188

Query: 197 FLRRRKRFKR 206
           F RR + F+R
Sbjct: 189 FRRRPRGFRR 198


>gi|24497501 forkhead box A1 [Homo sapiens]
          Length = 472

 Score =  142 bits (357), Expect = 7e-34
 Identities = 88/194 (45%), Positives = 105/194 (54%), Gaps = 27/194 (13%)

Query: 83  PSEFGTKFRAPPRSAAASEDARQPAKPPYSYIALITMAILQNPHKRLTLSGICAFISGRF 142
           PS  G         A   + +   AKPPYSYI+LITMAI Q P K LTLS I  +I   F
Sbjct: 145 PSNLGRSRAGGGGDAKTFKRSYPHAKPPYSYISLITMAIQQAPSKMLTLSEIYQWIMDLF 204

Query: 143 PYYRRKFPAWQNSIRHNLSLNDCFVKIPREPGHPGKGNYWSLDPASQDMFDNGSFLRRRK 202
           PYYR+    WQNSIRH+LS NDCFVK+ R P  PGKG+YW+L P S +MF+NG +LRR+K
Sbjct: 205 PYYRQNQQRWQNSIRHSLSFNDCFVKVARSPDKPGKGSYWTLHPDSGNMFENGCYLRRQK 264

Query: 203 RFKRHQLTPGA--------------------HLPHPFPLPAAHAALH---NPHPGPLLGA 239
           RFK  +  PGA                      P     P+A + LH   +   G L GA
Sbjct: 265 RFKCEK-QPGAGGGGGSGSGGSGAKGGPESRKDPSGASNPSADSPLHRGVHGKTGQLEGA 323

Query: 240 PAPPQPVPGAYPNT 253
           PAP    P A P T
Sbjct: 324 PAPG---PAASPQT 334


>gi|208431824 forkhead box I3 [Homo sapiens]
          Length = 420

 Score =  142 bits (357), Expect = 7e-34
 Identities = 68/124 (54%), Positives = 84/124 (67%), Gaps = 6/124 (4%)

Query: 80  PSDPSEFGTKFRAPPRSAAASEDARQPAKPPYSYIALITMAILQNPHKRLTLSGICAFIS 139
           P+ P E G        S A+ ED  +  +PPYSY ALI MAI   P ++LTLS I  F++
Sbjct: 123 PAGPGELGWL------SMASREDLMKMVRPPYSYSALIAMAIQSAPERKLTLSHIYQFVA 176

Query: 140 GRFPYYRRKFPAWQNSIRHNLSLNDCFVKIPREPGHPGKGNYWSLDPASQDMFDNGSFLR 199
             FP+Y+R    WQNSIRHNLSLNDCF K+PR+   PGKGNYW+LDP  + MFDNG+F R
Sbjct: 177 DSFPFYQRSKAGWQNSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDPNCEKMFDNGNFRR 236

Query: 200 RRKR 203
           +RKR
Sbjct: 237 KRKR 240


>gi|12751477 forkhead box L2 [Homo sapiens]
          Length = 376

 Score =  141 bits (355), Expect = 1e-33
 Identities = 67/116 (57%), Positives = 83/116 (71%), Gaps = 1/116 (0%)

Query: 99  ASEDARQPAKPPYSYIALITMAILQNPHKRLTLSGICAFISGRFPYYRRKFPAWQNSIRH 158
           A E      KPPYSY+ALI MAI ++  KRLTLSGI  +I  +FP+Y +    WQNSIRH
Sbjct: 45  APEKPDPAQKPPYSYVALIAMAIRESAEKRLTLSGIYQYIIAKFPFYEKNKKGWQNSIRH 104

Query: 159 NLSLNDCFVKIPREPGHPGKGNYWSLDPASQDMFDNGSFLRRRKRFKRHQLTPGAH 214
           NLSLN+CF+K+PRE G   KGNYW+LDPA +DMF+ G++ RRR+R KR    P AH
Sbjct: 105 NLSLNECFIKVPREGGGERKGNYWTLDPACEDMFEKGNY-RRRRRMKRPFRPPPAH 159



 Score = 30.8 bits (68), Expect = 2.4
 Identities = 22/54 (40%), Positives = 22/54 (40%), Gaps = 10/54 (18%)

Query: 216 PHPFPLPAA---HAALHNPHPGPLLGAPAPP-------QPVPGAYPNTAPGRRP 259
           PHP P P A   HAA   P   P  GA APP        P   A P  AP   P
Sbjct: 288 PHPHPHPHAHHLHAAAAPPPAPPHHGAAAPPPGQLSPASPATAAPPAPAPTSAP 341



 Score = 29.6 bits (65), Expect = 5.3
 Identities = 26/97 (26%), Positives = 34/97 (35%), Gaps = 5/97 (5%)

Query: 221 LPAAHAALHNPHPGPLLGAPAPPQPVPGAYPNTAPGRRPYALLHPHPLRYLLLSARVYAG 280
           LP      +N   GP    P PP P P  +         +A   P P      +A    G
Sbjct: 266 LPPGVVNSYNGLGGPPAAPPPPPHPHPHPH-----AHHLHAAAAPPPAPPHHGAAAPPPG 320

Query: 281 APKKAEGADLATPAPFPCCSPHLVLSLGRRARVWRRH 317
               A  A  A PAP P  +P L  +  R+  +   H
Sbjct: 321 QLSPASPATAAPPAPAPTSAPGLQFACARQPELAMMH 357


>gi|24497506 forkhead box A3 [Homo sapiens]
          Length = 350

 Score =  141 bits (355), Expect = 1e-33
 Identities = 80/177 (45%), Positives = 97/177 (54%), Gaps = 5/177 (2%)

Query: 76  GGGGPSDPSEFGTKFRAPPRSAAASEDARQP---AKPPYSYIALITMAILQNPHKRLTLS 132
           G  G S  S +G             +  R+P   AKPPYSYI+LITMAI Q P K LTLS
Sbjct: 82  GVSGGSSSSGYGAPGPGLVHGKEMPKGYRRPLAHAKPPYSYISLITMAIQQAPGKMLTLS 141

Query: 133 GICAFISGRFPYYRRKFPAWQNSIRHNLSLNDCFVKIPREPGHPGKGNYWSLDPASQDMF 192
            I  +I   FPYYR     WQNSIRH+LS NDCFVK+ R P  PGKG+YW+L P+S +MF
Sbjct: 142 EIYQWIMDLFPYYRENQQRWQNSIRHSLSFNDCFVKVARSPDKPGKGSYWALHPSSGNMF 201

Query: 193 DNGSFLRRRKRFKRHQLTP--GAHLPHPFPLPAAHAALHNPHPGPLLGAPAPPQPVP 247
           +NG +LRR+KRFK  +     G+            AA        +   P PP P P
Sbjct: 202 ENGCYLRRQKRFKLEEKVKKGGSGAATTTRNGTGSAASTTTPAATVTSPPQPPPPAP 258


>gi|24497504 forkhead box A2 isoform 2 [Homo sapiens]
          Length = 457

 Score =  139 bits (350), Expect = 5e-33
 Identities = 88/218 (40%), Positives = 113/218 (51%), Gaps = 52/218 (23%)

Query: 107 AKPPYSYIALITMAILQNPHKRLTLSGICAFISGRFPYYRRKFPAWQNSIRHNLSLNDCF 166
           AKPPYSYI+LITMAI Q+P+K LTLS I  +I   FP+YR+    WQNSIRH+LS NDCF
Sbjct: 158 AKPPYSYISLITMAIQQSPNKMLTLSEIYQWIMDLFPFYRQNQQRWQNSIRHSLSFNDCF 217

Query: 167 VKIPREPGHPGKGNYWSLDPASQDMFDNGSFLRRRKRFK-RHQLT--------------- 210
           +K+PR P  PGKG++W+L P S +MF+NG +LRR+KRFK   QL                
Sbjct: 218 LKVPRSPDKPGKGSFWTLHPDSGNMFENGCYLRRQKRFKCEKQLALKEAAGAAGSGKKAA 277

Query: 211 ---------------PGAHLPHPFPLPAAHAALHNPHP----GPLLGAPA----PPQPVP 247
                          P +  P     P + A+    H     G L G PA    PP+P P
Sbjct: 278 AGAQASQAQLGEAAGPASETPAGTESPHSSASPCQEHKRGGLGELKGTPAAALSPPEPAP 337

Query: 248 GAYPNTAPGRRPYALLHPHPLRYLLLSARVYAGAPKKA 285
                 +PG++  A  H       LL    + G P +A
Sbjct: 338 ------SPGQQQQAAAH-------LLGPPHHPGLPPEA 362


>gi|194394143 forkhead box A2 isoform 1 [Homo sapiens]
          Length = 463

 Score =  139 bits (350), Expect = 5e-33
 Identities = 88/218 (40%), Positives = 113/218 (51%), Gaps = 52/218 (23%)

Query: 107 AKPPYSYIALITMAILQNPHKRLTLSGICAFISGRFPYYRRKFPAWQNSIRHNLSLNDCF 166
           AKPPYSYI+LITMAI Q+P+K LTLS I  +I   FP+YR+    WQNSIRH+LS NDCF
Sbjct: 164 AKPPYSYISLITMAIQQSPNKMLTLSEIYQWIMDLFPFYRQNQQRWQNSIRHSLSFNDCF 223

Query: 167 VKIPREPGHPGKGNYWSLDPASQDMFDNGSFLRRRKRFK-RHQLT--------------- 210
           +K+PR P  PGKG++W+L P S +MF+NG +LRR+KRFK   QL                
Sbjct: 224 LKVPRSPDKPGKGSFWTLHPDSGNMFENGCYLRRQKRFKCEKQLALKEAAGAAGSGKKAA 283

Query: 211 ---------------PGAHLPHPFPLPAAHAALHNPHP----GPLLGAPA----PPQPVP 247
                          P +  P     P + A+    H     G L G PA    PP+P P
Sbjct: 284 AGAQASQAQLGEAAGPASETPAGTESPHSSASPCQEHKRGGLGELKGTPAAALSPPEPAP 343

Query: 248 GAYPNTAPGRRPYALLHPHPLRYLLLSARVYAGAPKKA 285
                 +PG++  A  H       LL    + G P +A
Sbjct: 344 ------SPGQQQQAAAH-------LLGPPHHPGLPPEA 368


>gi|169171269 PREDICTED: similar to forkhead box L2 [Homo sapiens]
          Length = 632

 Score =  138 bits (348), Expect = 8e-33
 Identities = 93/228 (40%), Positives = 120/228 (52%), Gaps = 36/228 (15%)

Query: 97  AAASEDARQPAKPPYSYIALITMAILQNPHKRLTLSGICAFISGRFPYYRRKFPAWQNSI 156
           A +S++ ++  +P YSYIALI MAI Q+P  R+TLSGI  FI  +FPYYR    AWQNSI
Sbjct: 21  AGSSDEDKRLTRPAYSYIALIAMAIQQSPAGRVTLSGIYDFIMRKFPYYRANQRAWQNSI 80

Query: 157 RHNLSLNDCFVKIPREPGH-PGKGNYWSLDPASQ---DMFDNGSFLRRRKRFKRHQLTP- 211
           RHNLSLN CFVK+PR  GH  GKGNYW+   + +   D+F+NG++ RRR+R    +  P 
Sbjct: 81  RHNLSLNSCFVKVPRSEGHEKGKGNYWTFAGSCESLLDLFENGNYRRRRRRRGPKREGPR 140

Query: 212 -----GAHLPH-PFPLPAAHAALHNPHPGPLLGAPAPPQPVPGAYPNTAPGRRPYALLHP 265
                GA  P  P  LPAA   L     G   GAP    P   A     PG+      HP
Sbjct: 141 GPRAGGAQGPSGPSELPAAQGRLAPDSAGE--GAPGREPPASPA----PPGKE-----HP 189

Query: 266 HPLRYLLLSARVYAGAPKKAEGADLATPAPFPCCSPHLVLSLGRRARV 313
             L++ +                 L++P PFP   P  +   GR  R+
Sbjct: 190 RDLKFSI--------------DYILSSPDPFPGLKPPCLAQEGRYPRL 223


>gi|195947376 forkhead box I2 [Homo sapiens]
          Length = 318

 Score =  137 bits (344), Expect = 2e-32
 Identities = 61/108 (56%), Positives = 79/108 (73%)

Query: 96  SAAASEDARQPAKPPYSYIALITMAILQNPHKRLTLSGICAFISGRFPYYRRKFPAWQNS 155
           S +  ++  +  +PPYSY ALI MAI   P ++LTLS I  +++G FP+Y+R    WQNS
Sbjct: 90  SLSGQQELLRLVRPPYSYSALIAMAIQSAPLRKLTLSQIYQYVAGNFPFYKRSKAGWQNS 149

Query: 156 IRHNLSLNDCFVKIPREPGHPGKGNYWSLDPASQDMFDNGSFLRRRKR 203
           IRHNLSLNDCF K+PR+   PGKGNYW+LDP  + MFDNG+F R+RKR
Sbjct: 150 IRHNLSLNDCFKKVPRDEDDPGKGNYWTLDPNCEKMFDNGNFRRKRKR 197



 Score = 29.3 bits (64), Expect = 6.9
 Identities = 24/74 (32%), Positives = 33/74 (44%), Gaps = 2/74 (2%)

Query: 209 LTPGAHLPHPFPLPAAHAALHNPHPGPLLGAPAPPQPVPGAYPNTAPGRRPYALLHPHPL 268
           L+P ++   P P P  +AA     PGPLLGAP        A+ + +  +    L+ P P 
Sbjct: 48  LSPKSYASGPGPAPP-YAAPSYGAPGPLLGAPGGLAGADLAWLSLSGQQELLRLVRP-PY 105

Query: 269 RYLLLSARVYAGAP 282
            Y  L A     AP
Sbjct: 106 SYSALIAMAIQSAP 119


>gi|169172132 PREDICTED: similar to forkhead box L2 [Homo sapiens]
          Length = 528

 Score =  135 bits (340), Expect = 7e-32
 Identities = 92/228 (40%), Positives = 118/228 (51%), Gaps = 36/228 (15%)

Query: 97  AAASEDARQPAKPPYSYIALITMAILQNPHKRLTLSGICAFISGRFPYYRRKFPAWQNSI 156
           A +S++ ++  +P YSYIALI MAI Q+P  R+TLSGI  FI  +FPYYR    AWQNSI
Sbjct: 316 AGSSDEDKRLTRPAYSYIALIAMAIQQSPAGRVTLSGIYDFIMRKFPYYRANQRAWQNSI 375

Query: 157 RHNLSLNDCFVKIPREPGH-PGKGNYWSLDPASQ---DMFDNGSFLRRRKRFKRHQLTP- 211
           RHNLSLN CFVK+PR  GH  GKGNYW+     +   D+F+NG++ RRR+R    +  P 
Sbjct: 376 RHNLSLNSCFVKVPRSEGHEKGKGNYWTFAGGCESLLDLFENGNYRRRRRRRGPKREGPR 435

Query: 212 -----GAHLPH-PFPLPAAHAALHNPHPGPLLGAPAPPQPVPGAYPNTAPGRRPYALLHP 265
                GA  P  P   PAA   L     G   GAP    P   A     PG+      HP
Sbjct: 436 GPRAGGAQGPSGPSEPPAAQGRLAPDSAGE--GAPGREPPASPA----PPGKE-----HP 484

Query: 266 HPLRYLLLSARVYAGAPKKAEGADLATPAPFPCCSPHLVLSLGRRARV 313
             L++ +                 L++P PFP   P  +   GR  R+
Sbjct: 485 RDLKFSI--------------DYILSSPDPFPGLKPPCLAQEGRYPRL 518


>gi|113419423 PREDICTED: similar to forkhead box L2 [Homo sapiens]
          Length = 387

 Score =  135 bits (340), Expect = 7e-32
 Identities = 92/228 (40%), Positives = 118/228 (51%), Gaps = 36/228 (15%)

Query: 97  AAASEDARQPAKPPYSYIALITMAILQNPHKRLTLSGICAFISGRFPYYRRKFPAWQNSI 156
           A +S++ ++  +P YSYIALI MAI Q+P  R+TLSGI  FI  +FPYYR    AWQNSI
Sbjct: 83  AGSSDEDKRLTRPAYSYIALIAMAIQQSPAGRVTLSGIYDFIMRKFPYYRANQRAWQNSI 142

Query: 157 RHNLSLNDCFVKIPREPGH-PGKGNYWSLDPASQ---DMFDNGSFLRRRKRFKRHQLTP- 211
           RHNLSLN CFVK+PR  GH  GKGNYW+     +   D+F+NG++ RRR+R    +  P 
Sbjct: 143 RHNLSLNSCFVKVPRSEGHEKGKGNYWTFAGGCESLLDLFENGNYRRRRRRRGPKREGPR 202

Query: 212 -----GAHLPH-PFPLPAAHAALHNPHPGPLLGAPAPPQPVPGAYPNTAPGRRPYALLHP 265
                GA  P  P   PAA   L     G   GAP    P   A     PG+      HP
Sbjct: 203 GPRAGGAQGPSGPSEPPAAQGRLAPDSAGE--GAPGREPPASPA----PPGKE-----HP 251

Query: 266 HPLRYLLLSARVYAGAPKKAEGADLATPAPFPCCSPHLVLSLGRRARV 313
             L++ +                 L++P PFP   P  +   GR  R+
Sbjct: 252 RDLKFSI--------------DYILSSPDPFPGLKPPCLAQEGRYPRL 285


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.320    0.138    0.451 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,717,913
Number of Sequences: 37866
Number of extensions: 1460588
Number of successful extensions: 15852
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 247
Number of HSP's successfully gapped in prelim test: 411
Number of HSP's that attempted gapping in prelim test: 11745
Number of HSP's gapped (non-prelim): 3023
length of query: 416
length of database: 18,247,518
effective HSP length: 105
effective length of query: 311
effective length of database: 14,271,588
effective search space: 4438463868
effective search space used: 4438463868
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 63 (28.9 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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