Guide to the Human Genome
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Name: FOXD4 Sequence: fasta or formatted (439aa) NCBI GI: 75677594
Description:

forkhead box D4

Referenced in:

FOX Family

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            11.8         52           3
 C cysteine            2.3         10           2
 D aspartate           3.9         17           1
 E glutamate           5.5         24           3
 F phenylalanine       3.0         13           1
 G glycine             8.9         39           4
 H histidine           3.2         14           1
 I isoleucine          2.3         10           1
 K lysine              2.5         11           2
 L leucine             9.8         43           3
 M methionine          0.7          3           1
 N asparagine          2.1          9           1
 P proline            12.1         53           2
 Q glutamine           4.8         21           4
 R arginine            9.6         42           3
 S serine              8.7         38           2
 T threonine           3.0         13           1
 V valine              3.2         14           1
 W tryptophan          0.9          4           1
 Y tyrosine            2.1          9           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   forkhead box D4 
FOXD4L3               0.777   forkhead box D4-like 3 
FOXD4L6               0.775   forkhead box D4-like 6 
FOXD4L5               0.768   forkhead box D4-like 5 
FOXD4L2               0.767   forkhead box D4-like 2 
FOXD4L4               0.767   forkhead box D4-like 4 
FOXD4L1               0.619   forkhead box D4-like 1 
FOXD1                 0.214   forkhead box D1 
FOXD2                 0.213   forkhead box D2 
FOXD3                 0.199   forkhead box D3 
FOXE3                 0.176   forkhead box E3 
FOXC1                 0.164   forkhead box C1 
FOXE1                 0.164   forkhead box E1 
FOXL1                 0.155   forkhead box L1 
FOXC2                 0.147   forkhead box C2 
FOXF1                 0.142   forkhead box F1 
FOXB2                 0.142   forkhead box B2 
FOXS1                 0.140   forkhead box S1 
FOXA1                 0.136   forkhead box A1 
FOXB1                 0.136   forkhead box B1 
FOXF2                 0.134   forkhead box F2 
FOXI3                 0.133   forkhead box I3 
FOXA3                 0.131   forkhead box A3 
FOXA2                 0.130   forkhead box A2 isoform 2 
FOXA2                 0.130   forkhead box A2 isoform 1 
FOXL2                 0.127   forkhead box L2 
FOXI1                 0.123   forkhead box I1 isoform a 
LOC651986             0.121   PREDICTED: similar to forkhead box L2 
LOC651986             0.121   PREDICTED: similar to forkhead box L2 
LOC651986             0.121   PREDICTED: similar to forkhead box L2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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