Guide to the Human Genome
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Name: TET3 Sequence: fasta or formatted (1660aa) NCBI GI: 149944516
Description:

tet oncogene family member 3

Referenced in:

Hematopoiesis and Erythrocytes

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.0        149           3
 C cysteine            1.9         31           1
 D aspartate           3.3         55           2
 E glutamate           7.7        127           6
 F phenylalanine       3.0         49           1
 G glycine             8.1        134           4
 H histidine           2.5         42           2
 I isoleucine          2.5         41           1
 K lysine              6.0         99           4
 L leucine             8.6        143           2
 M methionine          1.0         17           1
 N asparagine          2.6         43           2
 P proline            11.7        194           3
 Q glutamine           4.7         78           2
 R arginine            4.8         80           2
 S serine              9.9        165           3
 T threonine           4.6         77           2
 V valine              4.4         73           2
 W tryptophan          1.4         24           2
 Y tyrosine            2.3         39           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   tet oncogene family member 3 
TET2                  0.171   tet oncogene family member 2 isoform a 
TET1                  0.142   CXXC finger 6 
FLJ22184              0.021   PREDICTED: hypothetical protein FLJ22184 
FLJ22184              0.019   PREDICTED: hypothetical protein FLJ22184 
FLJ22184              0.019   PREDICTED: hypothetical protein LOC80164 
MLL2                  0.018   myeloid/lymphoid or mixed-lineage leukemia 2 
PRG4                  0.018   proteoglycan 4 isoform D 
PRG4                  0.018   proteoglycan 4 isoform C 
PRG4                  0.018   proteoglycan 4 isoform B 
PRG4                  0.018   proteoglycan 4 isoform A 
NACA                  0.018   nascent polypeptide-associated complex alpha subuni...
RAPH1                 0.016   Ras association and pleckstrin homology domains 1 is...
CASKIN2               0.015   cask-interacting protein 2 isoform b 
CASKIN2               0.015   cask-interacting protein 2 isoform a 
MUC2                  0.015   mucin 2 precursor 
KDM6B                 0.015   lysine (K)-specific demethylase 6B 
WIPF1                 0.015   WAS/WASL interacting protein family, member 1 [Homo...
WIPF1                 0.015   WAS/WASL interacting protein family, member 1 
SRCAP                 0.014   Snf2-related CBP activator protein 
MLL4                  0.014   myeloid/lymphoid or mixed-lineage leukemia 4 
RERE                  0.014   atrophin-1 like protein isoform b 
RERE                  0.014   atrophin-1 like protein isoform a 
RERE                  0.014   atrophin-1 like protein isoform a 
KIAA1522              0.013   hypothetical protein LOC57648 
LOC284297             0.013   hypothetical protein LOC284297 
TET2                  0.013   tet oncogene family member 2 isoform b 
PCLO                  0.013   piccolo isoform 2 
PCLO                  0.013   piccolo isoform 1 
GLTSCR1               0.012   glioma tumor suppressor candidate region gene 1 [Ho...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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