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Search of human proteins with 14916437
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|14916437 prostein [Homo sapiens]
(553 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|14916437 prostein [Homo sapiens] 1106 0.0
gi|61635915 membrane-associated transporter protein isoform a [H... 176 7e-44
gi|61636000 membrane-associated transporter protein isoform b [H... 175 1e-43
gi|122937259 solute carrier family 45, member 4 [Homo sapiens] 116 6e-26
gi|122937193 DNB5 [Homo sapiens] 111 2e-24
gi|18105032 type X collagen alpha 1 precursor [Homo sapiens] 38 0.021
gi|25777671 protein phosphatase 1, regulatory subunit 10 [Homo s... 34 0.31
gi|120587025 SH3 and multiple ankyrin repeat domains 1 [Homo sap... 33 0.52
gi|110556644 zinc finger protein, multitype 1 [Homo sapiens] 33 0.89
gi|239747304 PREDICTED: hypothetical protein XP_002346416 [Homo ... 32 1.2
gi|55750053 atrophin-1 [Homo sapiens] 32 1.5
gi|55750041 atrophin-1 [Homo sapiens] 32 1.5
gi|24308436 methionine-tRNA synthetase 2 precursor [Homo sapiens] 32 1.5
gi|4505971 solute carrier family 43, member 1 [Homo sapiens] 32 1.5
gi|6912464 latrophilin 2 precursor [Homo sapiens] 32 1.5
gi|119508426 alpha 3 type IX collagen [Homo sapiens] 32 2.0
gi|115527070 alpha 2 type VI collagen isoform 2C2a' precursor [H... 31 2.6
gi|115527066 alpha 2 type VI collagen isoform 2C2a precursor [Ho... 31 2.6
gi|115527062 alpha 2 type VI collagen isoform 2C2 precursor [Hom... 31 2.6
gi|195972857 Rho/Rac guanine nucleotide exchange factor 18 isofo... 31 3.4
gi|41327769 Rho/Rac guanine nucleotide exchange factor 18 isofor... 31 3.4
gi|239753839 PREDICTED: hypothetical protein [Homo sapiens] 30 4.4
gi|239747122 PREDICTED: hypothetical protein XP_002343916 [Homo ... 30 4.4
gi|239746558 PREDICTED: hypothetical protein XP_002343788 [Homo ... 30 4.4
gi|38348332 killer cell lectin-like receptor subfamily G, member... 30 4.4
gi|13128980 proline rich 14 [Homo sapiens] 30 4.4
gi|4502951 collagen type III alpha 1 preproprotein [Homo sapiens] 30 5.8
gi|111185957 downstream of tyrosine kinase 7 [Homo sapiens] 30 5.8
gi|169201757 PREDICTED: chromosome 10 open reading frame 134 [Ho... 30 5.8
gi|169201331 PREDICTED: chromosome 10 open reading frame 134 [Ho... 30 5.8
>gi|14916437 prostein [Homo sapiens]
Length = 553
Score = 1106 bits (2861), Expect = 0.0
Identities = 553/553 (100%), Positives = 553/553 (100%)
Query: 1 MVQRLWVSRLLRHRKAQLLLVNLLTFGLEVCLAAGITYVPPLLLEVGVEEKFMTMVLGIG 60
MVQRLWVSRLLRHRKAQLLLVNLLTFGLEVCLAAGITYVPPLLLEVGVEEKFMTMVLGIG
Sbjct: 1 MVQRLWVSRLLRHRKAQLLLVNLLTFGLEVCLAAGITYVPPLLLEVGVEEKFMTMVLGIG 60
Query: 61 PVLGLVCVPLLGSASDHWRGRYGRRRPFIWALSLGILLSLFLIPRAGWLAGLLCPDPRPL 120
PVLGLVCVPLLGSASDHWRGRYGRRRPFIWALSLGILLSLFLIPRAGWLAGLLCPDPRPL
Sbjct: 61 PVLGLVCVPLLGSASDHWRGRYGRRRPFIWALSLGILLSLFLIPRAGWLAGLLCPDPRPL 120
Query: 121 ELALLILGVGLLDFCGQVCFTPLEALLSDLFRDPDHCRQAYSVYAFMISLGGCLGYLLPA 180
ELALLILGVGLLDFCGQVCFTPLEALLSDLFRDPDHCRQAYSVYAFMISLGGCLGYLLPA
Sbjct: 121 ELALLILGVGLLDFCGQVCFTPLEALLSDLFRDPDHCRQAYSVYAFMISLGGCLGYLLPA 180
Query: 181 IDWDTSALAPYLGTQEECLFGLLTLIFLTCVAATLLVAEEAALGPTEPAEGLSAPSLSPH 240
IDWDTSALAPYLGTQEECLFGLLTLIFLTCVAATLLVAEEAALGPTEPAEGLSAPSLSPH
Sbjct: 181 IDWDTSALAPYLGTQEECLFGLLTLIFLTCVAATLLVAEEAALGPTEPAEGLSAPSLSPH 240
Query: 241 CCPCRARLAFRNLGALLPRLHQLCCRMPRTLRRLFVAELCSWMALMTFTLFYTDFVGEGL 300
CCPCRARLAFRNLGALLPRLHQLCCRMPRTLRRLFVAELCSWMALMTFTLFYTDFVGEGL
Sbjct: 241 CCPCRARLAFRNLGALLPRLHQLCCRMPRTLRRLFVAELCSWMALMTFTLFYTDFVGEGL 300
Query: 301 YQGVPRAEPGTEARRHYDEGVRMGSLGLFLQCAISLVFSLVMDRLVQRFGTRAVYLASVA 360
YQGVPRAEPGTEARRHYDEGVRMGSLGLFLQCAISLVFSLVMDRLVQRFGTRAVYLASVA
Sbjct: 301 YQGVPRAEPGTEARRHYDEGVRMGSLGLFLQCAISLVFSLVMDRLVQRFGTRAVYLASVA 360
Query: 361 AFPVAAGATCLSHSVAVVTASAALTGFTFSALQILPYTLASLYHREKQVFLPKYRGDTGG 420
AFPVAAGATCLSHSVAVVTASAALTGFTFSALQILPYTLASLYHREKQVFLPKYRGDTGG
Sbjct: 361 AFPVAAGATCLSHSVAVVTASAALTGFTFSALQILPYTLASLYHREKQVFLPKYRGDTGG 420
Query: 421 ASSEDSLMTSFLPGPKPGAPFPNGHVGAGGSGLLPPPPALCGASACDVSVRVVVGEPTEA 480
ASSEDSLMTSFLPGPKPGAPFPNGHVGAGGSGLLPPPPALCGASACDVSVRVVVGEPTEA
Sbjct: 421 ASSEDSLMTSFLPGPKPGAPFPNGHVGAGGSGLLPPPPALCGASACDVSVRVVVGEPTEA 480
Query: 481 RVVPGRGICLDLAILDSAFLLSQVAPSLFMGSIVQLSQSVTAYMVSAAGLGLVAIYFATQ 540
RVVPGRGICLDLAILDSAFLLSQVAPSLFMGSIVQLSQSVTAYMVSAAGLGLVAIYFATQ
Sbjct: 481 RVVPGRGICLDLAILDSAFLLSQVAPSLFMGSIVQLSQSVTAYMVSAAGLGLVAIYFATQ 540
Query: 541 VVFDKSDLAKYSA 553
VVFDKSDLAKYSA
Sbjct: 541 VVFDKSDLAKYSA 553
>gi|61635915 membrane-associated transporter protein isoform a [Homo
sapiens]
Length = 530
Score = 176 bits (445), Expect = 7e-44
Identities = 127/445 (28%), Positives = 199/445 (44%), Gaps = 41/445 (9%)
Query: 16 AQLLLVNLLTFGLEVCLAAGITYVPPLLLEVGVEEKFMTMVLGIGPVLGLVCVPLLGSAS 75
++L++ ++ FG E C A YV P+LL VG+ ++V + P+LG + P++GSAS
Sbjct: 33 SRLIMHSMAMFGREFCYAVEAAYVTPVLLSVGLPSSLYSIVWFLSPILGFLLQPVVGSAS 92
Query: 76 DHWRGRYGRRRPFIWALSLGILLSLFLIPRAGWLAGLLCPDPR---PLELALLILGVGLL 132
DH R R+GRRRP+I L + +L+ + L + L +PR +++ ++GV L
Sbjct: 93 DHCRSRWGRRRPYILTLGVMMLVGMALYLNGATVVAALIANPRRKLVWAISVTMIGVVLF 152
Query: 133 DFCGQVCFTPLEALLSDLFRDPDHCRQAYSVYAFMISLGGCLGYLLPAIDWDTSALAPYL 192
DF P++A L D+ D + +A GG LGYLL AIDW L L
Sbjct: 153 DFAADFIDGPIKAYLFDVCSHQDK-EKGLHYHALFTGFGGALGYLLGAIDWAHLELGRLL 211
Query: 193 GTQEECLFGLLTLIFLTCVAATLLVAEEAALGPTEPAEGLSAPSLSPHCCPCRA------ 246
GT+ + +F L+ C L EA L TE A+G+ P +P P +
Sbjct: 212 GTEFQVMFFFSALVLTLCFTVHLCSISEAPL--TEVAKGI-PPQQTPQDPPLSSDGMYEY 268
Query: 247 -------------RLAFRNL-----------GALLPRLHQLCCRMPRTLRRLFVAELCSW 282
LA + L L + MP R L ++ L W
Sbjct: 269 GSIEKVKNGYVNPELAMQGAKNKNHAEQTRRAMTLKSLLRALVNMPPHYRYLCISHLIGW 328
Query: 283 MALMTFTLFYTDFVGEGLYQGVPRAEPGTEARRHYDEGVRMGSLGLFLQCAISLVFSLVM 342
A ++ LF+TDF+G+ +Y+G P + + Y+ GV +G G + S ++S
Sbjct: 329 TAFLSNMLFFTDFMGQIVYRGDPYSAHNSTEFLIYERGVEVGCWGFCINSVFSSLYSYFQ 388
Query: 343 DRLVQRFGTRAVYLASVAAFPVAAGATCLSHSVAVVTASAALTGFTFSALQILPYTLASL 402
LV G + +Y F + G L +V +L G S L +P+ L +
Sbjct: 389 KVLVSYIGLKGLYFTGYLLFGLGTGFIGLFPNVYSTLVLCSLFGVMSSTLYTVPFNLITE 448
Query: 403 YHREKQVFLPKYRGDTGGASSEDSL 427
YHRE++ K R G ++S+
Sbjct: 449 YHREEE----KERQQAPGGDPDNSV 469
>gi|61636000 membrane-associated transporter protein isoform b [Homo
sapiens]
Length = 460
Score = 175 bits (443), Expect = 1e-43
Identities = 123/426 (28%), Positives = 192/426 (45%), Gaps = 37/426 (8%)
Query: 16 AQLLLVNLLTFGLEVCLAAGITYVPPLLLEVGVEEKFMTMVLGIGPVLGLVCVPLLGSAS 75
++L++ ++ FG E C A YV P+LL VG+ ++V + P+LG + P++GSAS
Sbjct: 33 SRLIMHSMAMFGREFCYAVEAAYVTPVLLSVGLPSSLYSIVWFLSPILGFLLQPVVGSAS 92
Query: 76 DHWRGRYGRRRPFIWALSLGILLSLFLIPRAGWLAGLLCPDPR---PLELALLILGVGLL 132
DH R R+GRRRP+I L + +L+ + L + L +PR +++ ++GV L
Sbjct: 93 DHCRSRWGRRRPYILTLGVMMLVGMALYLNGATVVAALIANPRRKLVWAISVTMIGVVLF 152
Query: 133 DFCGQVCFTPLEALLSDLFRDPDHCRQAYSVYAFMISLGGCLGYLLPAIDWDTSALAPYL 192
DF P++A L D+ D + +A GG LGYLL AIDW L L
Sbjct: 153 DFAADFIDGPIKAYLFDVCSHQDK-EKGLHYHALFTGFGGALGYLLGAIDWAHLELGRLL 211
Query: 193 GTQEECLFGLLTLIFLTCVAATLLVAEEAALGPTEPAEGLSAPSLSPHCCPCRA------ 246
GT+ + +F L+ C L EA L TE A+G+ P +P P +
Sbjct: 212 GTEFQVMFFFSALVLTLCFTVHLCSISEAPL--TEVAKGI-PPQQTPQDPPLSSDGMYEY 268
Query: 247 -------------RLAFRNL-----------GALLPRLHQLCCRMPRTLRRLFVAELCSW 282
LA + L L + MP R L ++ L W
Sbjct: 269 GSIEKVKNGYVNPELAMQGAKNKNHAEQTRRAMTLKSLLRALVNMPPHYRYLCISHLIGW 328
Query: 283 MALMTFTLFYTDFVGEGLYQGVPRAEPGTEARRHYDEGVRMGSLGLFLQCAISLVFSLVM 342
A ++ LF+TDF+G+ +Y+G P + + Y+ GV +G G + S ++S
Sbjct: 329 TAFLSNMLFFTDFMGQIVYRGDPYSAHNSTEFLIYERGVEVGCWGFCINSVFSSLYSYFQ 388
Query: 343 DRLVQRFGTRAVYLASVAAFPVAAGATCLSHSVAVVTASAALTGFTFSALQILPYTLASL 402
LV G + +Y F + G L +V +L G S L +P+ L +
Sbjct: 389 KVLVSYIGLKGLYFTGYLLFGLGTGFIGLFPNVYSTLVLCSLFGVMSSTLYTVPFNLITE 448
Query: 403 YHREKQ 408
YHRE++
Sbjct: 449 YHREEE 454
>gi|122937259 solute carrier family 45, member 4 [Homo sapiens]
Length = 798
Score = 116 bits (290), Expect = 6e-26
Identities = 72/205 (35%), Positives = 109/205 (53%), Gaps = 6/205 (2%)
Query: 44 LEVGVEEKFMTMVLGIGPVLGLVCVPLLGSASDHWRGRYGRRRPFIWALSLGIL--LSLF 101
L+ G+ E++ ++ + P+LGL+ PL+GSASD +GRRRPFI AL +G+L ++LF
Sbjct: 27 LQKGLPEQYYSLTWFLSPILGLIFTPLIGSASDRCTLSWGRRRPFILALCVGVLFGVALF 86
Query: 102 LIPRAGWLAGLLCPDPRPLELALLILGVGLLDFCGQVCFTPLEALLSDLFRDPDHCRQAY 161
L A LA P+ +P+ + L +LGV +LDF P+ A L D+ D + A
Sbjct: 87 LNGSAIGLALGDVPNRQPIGIVLTVLGVVVLDFSADATEGPIRAYLLDVV-DSEEQDMAL 145
Query: 162 SVYAFMISLGGCLGYLLPAIDWDTSALAPYLGTQEECLFGLLTLIFLTCVAATLLVAEEA 221
+++AF LGG +GY+L +DW + L + TQ + LF +IF VA L +E
Sbjct: 146 NIHAFSAGLGGAIGYVLGGLDWTQTFLGSWFRTQNQVLFFFAAIIFTVSVALHLFSIDEE 205
Query: 222 ALGPTEPAEGLSAPSL---SPHCCP 243
P + +L PH P
Sbjct: 206 QYSPQQERSAEEPGALDGGEPHGVP 230
Score = 83.2 bits (204), Expect = 6e-16
Identities = 41/145 (28%), Positives = 73/145 (50%), Gaps = 2/145 (1%)
Query: 266 RMPRTLRRLFVAELCSWMALMTFTLFYTDFVGEGLYQGVPRAEPGTEARRHYDEGVRMGS 325
+MPR L RL + L +W +++ +FYTDF+G+ +++G P+A + A + Y+ GV+MG
Sbjct: 452 KMPRELMRLCLCHLLTWFSVIAEAVFYTDFMGQVIFEGDPKAPSNSTAWQAYNAGVKMGC 511
Query: 326 LGLFLQCAISLVFSLVMDRLVQRF--GTRAVYLASVAAFPVAAGATCLSHSVAVVTASAA 383
GL + A + S ++ + + + R +Y+ F V + +V V + +
Sbjct: 512 WGLVIYAATGAICSALLQKYLDNYDLSVRVIYVLGTLGFSVGTAVMAMFPNVYVAMVTIS 571
Query: 384 LTGFTFSALQILPYTLASLYHREKQ 408
G ++ PY L YH KQ
Sbjct: 572 TMGIVSMSISYCPYALLGQYHDIKQ 596
>gi|122937193 DNB5 [Homo sapiens]
Length = 748
Score = 111 bits (277), Expect = 2e-24
Identities = 75/226 (33%), Positives = 113/226 (50%), Gaps = 8/226 (3%)
Query: 17 QLLLVNLLTFGLEVCLAAGITYVPPLLLEVGVEEKFMTMVLGIGPVLGLVCVPLLGSASD 76
+LL + FG+E A YV P+LL++G+ ++ ++V I P+LG + PLLG+ SD
Sbjct: 86 ELLFNGCILFGIEFSYAMETAYVTPVLLQMGLPDQLYSLVWFISPILGFLLQPLLGAWSD 145
Query: 77 HWRGRYGRRRPFIWALSLGILLSLFLIPRAGWLAGLLCPD---PRPLELALLILGVGLLD 133
R+GRRRPFI L++G LL L L+ G G+ D L L + GV L+D
Sbjct: 146 RCTSRFGRRRPFILVLAIGALLGLSLLLN-GRDIGIALADVTGNHKWGLLLTVCGVVLMD 204
Query: 134 FCGQVCFTPLEALLSDLFRDPDHCRQAYSVYAFMISLGGCLGYLLPAIDWDTSALAPYLG 193
F P A + D+ D R +++A + LGG GY++ I WD + LG
Sbjct: 205 FSADSADNPSHAYMMDVCSPADQDR-GLNIHALLAGLGGGFGYVVGGIHWDKTGFGRALG 263
Query: 194 TQEECLFGLLTLIFL--TCVAATLLVAEEAALGPTEPAEGLSAPSL 237
Q ++ L T + L T V + + E P+E + +PSL
Sbjct: 264 GQLRVIY-LFTAVTLSVTTVLTLVSIPERPLRPPSEKRAAMKSPSL 308
Score = 99.4 bits (246), Expect = 8e-21
Identities = 55/171 (32%), Positives = 87/171 (50%)
Query: 259 RLHQLCCRMPRTLRRLFVAELCSWMALMTFTLFYTDFVGEGLYQGVPRAEPGTEARRHYD 318
RL C MP+ LR L V W++ LFYTDF+GE ++QG P+A +EA + Y+
Sbjct: 511 RLCSTICNMPKALRTLCVNHFLGWLSFEGMLLFYTDFMGEVVFQGDPKAPHTSEAYQKYN 570
Query: 319 EGVRMGSLGLFLQCAISLVFSLVMDRLVQRFGTRAVYLASVAAFPVAAGATCLSHSVAVV 378
GV MG G+ + + +S ++++L + R +Y + AF + G LS ++ VV
Sbjct: 571 SGVTMGCWGMCIYAFSAAFYSAILEKLEEFLSVRTLYFIAYLAFGLGTGLATLSRNLYVV 630
Query: 379 TASAALTGFTFSALQILPYTLASLYHREKQVFLPKYRGDTGGASSEDSLMT 429
+ G FS L LPY+L Y++ K+ G G + SL++
Sbjct: 631 LSLCITYGILFSTLCTLPYSLLCDYYQSKKFAGSSADGTRRGMGVDISLLS 681
>gi|18105032 type X collagen alpha 1 precursor [Homo sapiens]
Length = 680
Score = 38.1 bits (87), Expect = 0.021
Identities = 42/140 (30%), Positives = 53/140 (37%), Gaps = 35/140 (25%)
Query: 412 PKYRGDTG--GASSEDSLMTSFLPGPK--PGAPFPNGHVGAGGSGLLPPPPALCGASACD 467
P +GD G G + T L GP PG P P GH G G LP PP G
Sbjct: 463 PGSKGDPGSPGPPGPAGIATKGLNGPTGPPGPPGPRGHSGEPG---LPGPPGPPGP---- 515
Query: 468 VSVRVVVGEPTEARVVPGRGICLDLAILDSAFLLSQVAPSLFMGSIVQLSQSVTAYMVSA 527
PG+ A++ F+ + PSL +V +Q VT VSA
Sbjct: 516 ----------------PGQ------AVMPEGFIKAGQRPSLSGTPLVSANQGVTGMPVSA 553
Query: 528 AGLGLVAIY--FATQVVFDK 545
+ L Y T + FDK
Sbjct: 554 FTVILSKAYPAIGTPIPFDK 573
Score = 30.0 bits (66), Expect = 5.8
Identities = 17/34 (50%), Positives = 17/34 (50%), Gaps = 2/34 (5%)
Query: 432 LPGPK--PGAPFPNGHVGAGGSGLLPPPPALCGA 463
L GPK PG P P G G GG LP P GA
Sbjct: 396 LDGPKGNPGLPGPKGDPGVGGPPGLPGPVGPAGA 429
>gi|25777671 protein phosphatase 1, regulatory subunit 10 [Homo
sapiens]
Length = 940
Score = 34.3 bits (77), Expect = 0.31
Identities = 22/56 (39%), Positives = 25/56 (44%), Gaps = 6/56 (10%)
Query: 433 PGPKPGAPFPNGHVGAGGSGLLPPPPALCGASACDVSVRVVVGEPTEARVVPGRGI 488
PGP PG P+ G G GG+ PPPP GA G P R PG G+
Sbjct: 696 PGPGPG-PYHRGRGGRGGNEPPPPPPPFRGARGGRSG-----GGPPNGRGGPGGGM 745
Score = 30.8 bits (68), Expect = 3.4
Identities = 24/64 (37%), Positives = 25/64 (39%), Gaps = 6/64 (9%)
Query: 428 MTSFLPGPKPGAPFPNGHVGAGGSG----LLPPPPALCGASACDVSVRVVVGEPTEARVV 483
M F PGP G P P H G GG L PPPP G D + G P
Sbjct: 640 MQHFPPGP--GGPMPGPHGGPGGPVGPRLLGPPPPPRGGDPFWDGPGDPMRGGPMRGGPG 697
Query: 484 PGRG 487
PG G
Sbjct: 698 PGPG 701
>gi|120587025 SH3 and multiple ankyrin repeat domains 1 [Homo sapiens]
Length = 2161
Score = 33.5 bits (75), Expect = 0.52
Identities = 20/49 (40%), Positives = 21/49 (42%), Gaps = 11/49 (22%)
Query: 412 PKYRGDTGGASSEDSLMTSFLPGPKPGAPFPNGHVGAGGSGLLPPPPAL 460
P RG GG P P PGAP P+ H AGG G PAL
Sbjct: 1045 PSLRGWRGGG-----------PSPTPGAPSPSHHGSAGGGGGSSQGPAL 1082
>gi|110556644 zinc finger protein, multitype 1 [Homo sapiens]
Length = 1006
Score = 32.7 bits (73), Expect = 0.89
Identities = 30/101 (29%), Positives = 39/101 (38%), Gaps = 7/101 (6%)
Query: 225 PTEPAEGLSAPSLSPH--CCPCRARLAFRNLGALLPRLHQLCCRMPRTLRRLFVAELCSW 282
P P G AP+L+ + C CR ++F +L A L C P A C +
Sbjct: 801 PRRPLPGAPAPALADYHECTACR--VSFHSLEAYLAHKKYSCPAAPPPGALGLPAAACPY 858
Query: 283 M---ALMTFTLFYTDFVGEGLYQGVPRAEPGTEARRHYDEG 320
+ L + GL G P A PG EAR D G
Sbjct: 859 CPPNGPVRGDLLEHFRLAHGLLLGAPLAGPGVEARTPADRG 899
>gi|239747304 PREDICTED: hypothetical protein XP_002346416 [Homo
sapiens]
Length = 124
Score = 32.3 bits (72), Expect = 1.2
Identities = 26/81 (32%), Positives = 33/81 (40%), Gaps = 6/81 (7%)
Query: 409 VFLPKYRGDTGGASSEDSLMTSFLPGPKPGAPFPNGHVGAGGSGLLPPPPA---LCGASA 465
++L YR A S DSLM + P+ G G GAGG+G P P+ CG
Sbjct: 1 MYLRPYRDSLHFAQSNDSLMVARGENPRSGRR-ERGARGAGGAGNRAPRPSAAPTCGPG- 58
Query: 466 CDVSVRVVVGEPTEARVVPGR 486
GE + R GR
Sbjct: 59 -QAGAERAAGEAADCRRTEGR 78
>gi|55750053 atrophin-1 [Homo sapiens]
Length = 1190
Score = 32.0 bits (71), Expect = 1.5
Identities = 25/73 (34%), Positives = 29/73 (39%), Gaps = 6/73 (8%)
Query: 412 PKYRGDTGGASSEDSLMTSFLPGPKPGAPFPNGHVGAGGSGLLPPPPALCGASACDVSVR 471
P YRG + A +F PG P P G G LPPPPA AS +S
Sbjct: 671 PGYRGTSPPAGPG-----TFKPGSPTVGPGPLPPAGPSGLPSLPPPPA-APASGPPLSAT 724
Query: 472 VVVGEPTEARVVP 484
+ EP E P
Sbjct: 725 QIKQEPAEEYETP 737
>gi|55750041 atrophin-1 [Homo sapiens]
Length = 1190
Score = 32.0 bits (71), Expect = 1.5
Identities = 25/73 (34%), Positives = 29/73 (39%), Gaps = 6/73 (8%)
Query: 412 PKYRGDTGGASSEDSLMTSFLPGPKPGAPFPNGHVGAGGSGLLPPPPALCGASACDVSVR 471
P YRG + A +F PG P P G G LPPPPA AS +S
Sbjct: 671 PGYRGTSPPAGPG-----TFKPGSPTVGPGPLPPAGPSGLPSLPPPPA-APASGPPLSAT 724
Query: 472 VVVGEPTEARVVP 484
+ EP E P
Sbjct: 725 QIKQEPAEEYETP 737
>gi|24308436 methionine-tRNA synthetase 2 precursor [Homo sapiens]
Length = 593
Score = 32.0 bits (71), Expect = 1.5
Identities = 27/88 (30%), Positives = 34/88 (38%), Gaps = 6/88 (6%)
Query: 181 IDWDTSALAPYLGT----QEECL--FGLLTLIFLTCVAATLLVAEEAALGPTEPAEGLSA 234
++W++ AP+LGT ECL FG L +A LL + E
Sbjct: 495 LNWESPVDAPWLGTVLHVALECLRVFGTLLQPVTPSLADKLLSRLGVSASERSLGELYFL 554
Query: 235 PSLSPHCCPCRARLAFRNLGALLPRLHQ 262
P H CP R G L PRL Q
Sbjct: 555 PRFYGHPCPFEGRRLGPETGLLFPRLDQ 582
>gi|4505971 solute carrier family 43, member 1 [Homo sapiens]
Length = 559
Score = 32.0 bits (71), Expect = 1.5
Identities = 38/145 (26%), Positives = 57/145 (39%), Gaps = 26/145 (17%)
Query: 275 FVAELCSWMALMTFTLFYTDFVGEGLYQGVPRAEPGT-----EARR-----HYDEGVRMG 324
F A L W +L+ EG Y AE T E RR DE + +G
Sbjct: 26 FSAVLLGWGSLLII------LKNEGFYSSTCPAESSTNTTQDEQRRWPGCDQQDEMLNLG 79
Query: 325 -SLGLFLQCAISLVFSLVMDRLVQRFGTRAVYLASVAAFPVAAGATCLSHS-----VAVV 378
++G F+ A +L ++MDR FG R V L A F + L+ ++
Sbjct: 80 FTIGSFVLSATTLPLGILMDR----FGPRPVRLVGSACFTASCTLMALASRDVEALSPLI 135
Query: 379 TASAALTGFTFSALQILPYTLASLY 403
+ +L GF L TL +++
Sbjct: 136 FLALSLNGFGGICLTFTSLTLPNMF 160
>gi|6912464 latrophilin 2 precursor [Homo sapiens]
Length = 1403
Score = 32.0 bits (71), Expect = 1.5
Identities = 40/163 (24%), Positives = 64/163 (39%), Gaps = 32/163 (19%)
Query: 47 GVEEKFMTMVLGIGPVLGLVCVPLLGSASDHWRGRYGRRRPFIWALSLGILLS--LFLIP 104
GV E +T++ +G V+ LVC+ + +RG R L + + ++ +FLI
Sbjct: 828 GVHELLLTVITWVGIVISLVCLAICIFTFCFFRGLQSDRNTIHKNLCINLFIAEFIFLIG 887
Query: 105 RAGWLAGLLCPDPRPLELALLILGVGLLDFCGQVCF-------TPLEALLSDLFRDPDHC 157
+ CP + GLL F F L +L ++F + ++
Sbjct: 888 IDKTKYAIACP-----------IFAGLLHFFFLAAFAWMCLEGVQLYLMLVEVF-ESEYS 935
Query: 158 RQAYSVYAFMISLGGCLGYLLPAIDWDTSALAPY--LGTQEEC 198
R+ Y A GYL PA SA Y GT++ C
Sbjct: 936 RKKYYYVA---------GYLFPATVVGVSAAIDYKSYGTEKAC 969
>gi|119508426 alpha 3 type IX collagen [Homo sapiens]
Length = 684
Score = 31.6 bits (70), Expect = 2.0
Identities = 20/49 (40%), Positives = 26/49 (53%), Gaps = 7/49 (14%)
Query: 433 PGPKPGAPFPNGHVGAGGSGLLPPPPALCGASACDVSVRVVVGEPTEAR 481
PGP PG P G +GA G+ P +C SAC +V VGE + +R
Sbjct: 641 PGP-PGDPGLPGAIGAQGT------PGICDTSACQGAVLGGVGEKSGSR 682
>gi|115527070 alpha 2 type VI collagen isoform 2C2a' precursor [Homo
sapiens]
Length = 828
Score = 31.2 bits (69), Expect = 2.6
Identities = 18/40 (45%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Query: 433 PGPKPGAPFPNGHVGAGGSGLLPPPPALCGASACDVSVRV 472
PGP PG P P G G G P PP G + CDV V
Sbjct: 560 PGP-PGEPGPRGPRGVPGPEGEPGPPGDPGLTECDVMTYV 598
>gi|115527066 alpha 2 type VI collagen isoform 2C2a precursor [Homo
sapiens]
Length = 918
Score = 31.2 bits (69), Expect = 2.6
Identities = 18/40 (45%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Query: 433 PGPKPGAPFPNGHVGAGGSGLLPPPPALCGASACDVSVRV 472
PGP PG P P G G G P PP G + CDV V
Sbjct: 560 PGP-PGEPGPRGPRGVPGPEGEPGPPGDPGLTECDVMTYV 598
>gi|115527062 alpha 2 type VI collagen isoform 2C2 precursor [Homo
sapiens]
Length = 1019
Score = 31.2 bits (69), Expect = 2.6
Identities = 18/40 (45%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Query: 433 PGPKPGAPFPNGHVGAGGSGLLPPPPALCGASACDVSVRV 472
PGP PG P P G G G P PP G + CDV V
Sbjct: 560 PGP-PGEPGPRGPRGVPGPEGEPGPPGDPGLTECDVMTYV 598
>gi|195972857 Rho/Rac guanine nucleotide exchange factor 18 isoform b
[Homo sapiens]
Length = 1173
Score = 30.8 bits (68), Expect = 3.4
Identities = 24/83 (28%), Positives = 34/83 (40%), Gaps = 17/83 (20%)
Query: 406 EKQVFLPKYRGDTGGASSEDSLMTSFLPG-------PKPGAPFPNG----------HVGA 448
++Q+ L K G S ++ LPG P PG P P+ + A
Sbjct: 1080 KQQLLLNKLMGKDESTSRNRRSLSPILPGRHSPAPPPDPGFPAPSPPPADSPSEGFSLKA 1139
Query: 449 GGSGLLPPPPALCGASACDVSVR 471
GG+ LLP PPA A +S +
Sbjct: 1140 GGTALLPGPPAPSPLPATPLSAK 1162
>gi|41327769 Rho/Rac guanine nucleotide exchange factor 18 isoform a
[Homo sapiens]
Length = 1015
Score = 30.8 bits (68), Expect = 3.4
Identities = 24/83 (28%), Positives = 34/83 (40%), Gaps = 17/83 (20%)
Query: 406 EKQVFLPKYRGDTGGASSEDSLMTSFLPG-------PKPGAPFPNG----------HVGA 448
++Q+ L K G S ++ LPG P PG P P+ + A
Sbjct: 922 KQQLLLNKLMGKDESTSRNRRSLSPILPGRHSPAPPPDPGFPAPSPPPADSPSEGFSLKA 981
Query: 449 GGSGLLPPPPALCGASACDVSVR 471
GG+ LLP PPA A +S +
Sbjct: 982 GGTALLPGPPAPSPLPATPLSAK 1004
>gi|239753839 PREDICTED: hypothetical protein [Homo sapiens]
Length = 257
Score = 30.4 bits (67), Expect = 4.4
Identities = 22/65 (33%), Positives = 30/65 (46%), Gaps = 9/65 (13%)
Query: 422 SSEDSLMTSFLPGP---KPGAP--FPNGHV----GAGGSGLLPPPPALCGASACDVSVRV 472
S S + +PGP +PGAP +P G A + + PPPPA+ GA A V
Sbjct: 181 SPSSSRRWAAMPGPGAPRPGAPGTWPVGFAVAAPPAAAASVAPPPPAVAGAPAAAFRGWV 240
Query: 473 VVGEP 477
+P
Sbjct: 241 AAPDP 245
>gi|239747122 PREDICTED: hypothetical protein XP_002343916 [Homo
sapiens]
Length = 598
Score = 30.4 bits (67), Expect = 4.4
Identities = 31/100 (31%), Positives = 41/100 (41%), Gaps = 27/100 (27%)
Query: 421 ASSEDSLMTSFLPGPKPGAPFPNGHVGAGGSGLLPPPPALCGASACDVSVRVVVGEPTEA 480
+SS L+ +F PGP+ +P AG S PPP C C GEP
Sbjct: 27 SSSALPLLHAFAPGPQGRSP-------AGISTEPVPPPPQCPGCDC--------GEPIAQ 71
Query: 481 RVVPGRGICLDLAILDSAFLLS--QVAPSLFMGSIVQLSQ 518
R+ G D AF S Q A LF ++ +L+Q
Sbjct: 72 RLEEG----------DEAFRQSEYQKAAGLFRSTLARLAQ 101
>gi|239746558 PREDICTED: hypothetical protein XP_002343788 [Homo
sapiens]
Length = 616
Score = 30.4 bits (67), Expect = 4.4
Identities = 31/100 (31%), Positives = 41/100 (41%), Gaps = 27/100 (27%)
Query: 421 ASSEDSLMTSFLPGPKPGAPFPNGHVGAGGSGLLPPPPALCGASACDVSVRVVVGEPTEA 480
+SS L+ +F PGP+ +P AG S PPP C C GEP
Sbjct: 45 SSSALPLLHAFAPGPQGRSP-------AGISTEPVPPPPQCPGCDC--------GEPIAQ 89
Query: 481 RVVPGRGICLDLAILDSAFLLS--QVAPSLFMGSIVQLSQ 518
R+ G D AF S Q A LF ++ +L+Q
Sbjct: 90 RLEEG----------DEAFRQSEYQKAAGLFRSTLARLAQ 119
>gi|38348332 killer cell lectin-like receptor subfamily G, member 2
[Homo sapiens]
Length = 409
Score = 30.4 bits (67), Expect = 4.4
Identities = 16/38 (42%), Positives = 19/38 (50%)
Query: 222 ALGPTEPAEGLSAPSLSPHCCPCRARLAFRNLGALLPR 259
A G PAEG + SP CC C+ + ALLPR
Sbjct: 199 AEGRASPAEGSAGSPGSPTCCRCKELGLEKEDAALLPR 236
>gi|13128980 proline rich 14 [Homo sapiens]
Length = 585
Score = 30.4 bits (67), Expect = 4.4
Identities = 22/70 (31%), Positives = 27/70 (38%), Gaps = 17/70 (24%)
Query: 435 PKPGAPFPNGH-VGAGGSGLLPPPPALC-----------GAS-----ACDVSVRVVVGEP 477
P+P P P H VG G PPPP C GAS +C + EP
Sbjct: 352 PQPSRPRPRRHTVGGGEMARAPPPPRPCLRKEVFPLGGVGASPSLTTSCSSTASTSFSEP 411
Query: 478 TEARVVPGRG 487
E R+ +G
Sbjct: 412 AEPRLGSTKG 421
>gi|4502951 collagen type III alpha 1 preproprotein [Homo sapiens]
Length = 1466
Score = 30.0 bits (66), Expect = 5.8
Identities = 20/52 (38%), Positives = 26/52 (50%), Gaps = 7/52 (13%)
Query: 412 PKYRGDTGGASSEDSLMTSFLPGPKPGAPFPNGHVGAGGSGLLPPPPALCGA 463
P +G+ G A S S + PG + G P P GH GA G P PP + G+
Sbjct: 347 PGAKGEVGPAGSPGS---NGAPGQR-GEPGPQGHAGAQGP---PGPPGINGS 391
>gi|111185957 downstream of tyrosine kinase 7 [Homo sapiens]
Length = 504
Score = 30.0 bits (66), Expect = 5.8
Identities = 20/46 (43%), Positives = 22/46 (47%), Gaps = 8/46 (17%)
Query: 432 LPGPKPGAPFPNGHVGAGGSGLLPPPPALCGASACDVSVRVVVGEP 477
LPGP PG P+ G AG PPPA SAC V + V P
Sbjct: 466 LPGPAPGEPWEAGGPHAG------PPPAF--FSACPVCGGLKVNPP 503
>gi|169201757 PREDICTED: chromosome 10 open reading frame 134 [Homo
sapiens]
Length = 626
Score = 30.0 bits (66), Expect = 5.8
Identities = 30/99 (30%), Positives = 37/99 (37%), Gaps = 13/99 (13%)
Query: 361 AFPVAAGATCLSHSVAVVTASAALTGFTFSALQ-ILPYTLASLYHREKQVFLPKYRGDTG 419
A P A A + AV TA + LQ + P A + H + F K + D G
Sbjct: 116 ALPELAKAEEAERASAVSTAVQWVNSTITHELQGMAPSDQAEVDHLLRIFFASKVQEDKG 175
Query: 420 GASSEDSLMTSFLPGPKPGAPFPNGHVGAGGSGLLPPPP 458
E SL S +P P P P P PPPP
Sbjct: 176 RKELEKSLEYSTVPTPLPPVPPP------------PPPP 202
>gi|169201331 PREDICTED: chromosome 10 open reading frame 134 [Homo
sapiens]
Length = 626
Score = 30.0 bits (66), Expect = 5.8
Identities = 30/99 (30%), Positives = 37/99 (37%), Gaps = 13/99 (13%)
Query: 361 AFPVAAGATCLSHSVAVVTASAALTGFTFSALQ-ILPYTLASLYHREKQVFLPKYRGDTG 419
A P A A + AV TA + LQ + P A + H + F K + D G
Sbjct: 116 ALPELAKAEEAERASAVSTAVQWVNSTITHELQGMAPSDQAEVDHLLRIFFASKVQEDKG 175
Query: 420 GASSEDSLMTSFLPGPKPGAPFPNGHVGAGGSGLLPPPP 458
E SL S +P P P P P PPPP
Sbjct: 176 RKELEKSLEYSTVPTPLPPVPPP------------PPPP 202
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.327 0.142 0.443
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,520,163
Number of Sequences: 37866
Number of extensions: 1139316
Number of successful extensions: 5236
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 61
Number of HSP's that attempted gapping in prelim test: 5067
Number of HSP's gapped (non-prelim): 280
length of query: 553
length of database: 18,247,518
effective HSP length: 107
effective length of query: 446
effective length of database: 14,195,856
effective search space: 6331351776
effective search space used: 6331351776
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.