Guide to the Human Genome
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Name: C10orf134 Sequence: fasta or formatted (626aa) NCBI GI: 169201331
Description:

PREDICTED: chromosome 10 open reading frame 134

Not currently referenced in the text

Other entries for this name:
alt mRNA {626aa} PREDICTED: chromosome 10 open reading frame 134
alt mRNA {626aa} PREDICTED: chromosome 10 open reading frame 134
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.0         44           4
 C cysteine            2.1         13           1
 D aspartate           3.5         22           2
 E glutamate           9.1         57           3
 F phenylalanine       2.4         15           2
 G glycine             6.9         43           3
 H histidine           2.6         16           1
 I isoleucine          6.4         40           2
 K lysine              7.7         48           3
 L leucine            10.7         67           3
 M methionine          2.7         17           1
 N asparagine          4.2         26           1
 P proline             6.5         41           9
 Q glutamine           4.0         25           3
 R arginine            2.7         17           2
 S serine              7.0         44           3
 T threonine           6.1         38           2
 V valine              5.8         36           2
 W tryptophan          0.3          2           1
 Y tyrosine            2.4         15           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: chromosome 10 open reading frame 134 [Ho... 
C10orf134             1.000   PREDICTED: chromosome 10 open reading frame 134 [Ho...
C10orf134             1.000   PREDICTED: chromosome 10 open reading frame 134 [Ho...
ENO1                  0.052   enolase 1 
ENO3                  0.052   enolase 3 
ENO3                  0.052   enolase 3 
ENO2                  0.051   enolase 2 
FMNL2                 0.021   formin-like 2 
SETBP1                0.017   SET binding protein 1 isoform a 
ZFHX3                 0.017   AT-binding transcription factor 1 
JMY                   0.016   junction-mediating and regulatory protein 
ZFHX4                 0.016   zinc finger homeodomain 4 
RAPH1                 0.016   Ras association and pleckstrin homology domains 1 is...
PCLO                  0.014   piccolo isoform 2 
PCLO                  0.014   piccolo isoform 1 
FNBP4                 0.014   formin binding protein 4 
MYPOP                 0.014   Myb protein P42POP 
WHAMM                 0.014   WAS protein homolog associated with actin, golgi me...
IQSEC2                0.014   IQ motif and Sec7 domain 2 isoform1 
TRERF1                0.013   transcriptional regulating factor 1 
ESPNL                 0.013   espin-like 
AGAP2                 0.012   centaurin, gamma 1 isoform PIKE-L 
CHD3                  0.012   chromodomain helicase DNA binding protein 3 isoform...
SETD1B                0.012   SET domain containing 1B 
ZNF341                0.012   zinc finger protein 341 
KDM6B                 0.012   lysine (K)-specific demethylase 6B 
R3HDM1                0.012   R3H domain containing 1 
SF1                   0.012   splicing factor 1 isoform 1 
INF2                  0.012   inverted formin 2 isoform 2 
INF2                  0.012   inverted formin 2 isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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