Guide to the Human Genome
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Name: LPHN2 Sequence: fasta or formatted (1403aa) NCBI GI: 6912464
Description:

latrophilin 2 precursor

Referenced in:

Peptide and Protein G-coupled Signals

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.1         86           2
 C cysteine            2.6         37           2
 D aspartate           5.1         72           2
 E glutamate           5.3         75           2
 F phenylalanine       4.6         64           3
 G glycine             5.8         82           2
 H histidine           1.9         27           2
 I isoleucine          6.6         93           2
 K lysine              4.7         66           2
 L leucine             8.8        123           3
 M methionine          2.3         32           2
 N asparagine          5.7         80           3
 P proline             4.8         68           3
 Q glutamine           3.5         49           1
 R arginine            4.3         61           2
 S serine              8.8        123           3
 T threonine           7.0         98           3
 V valine              6.1         86           2
 W tryptophan          1.4         20           1
 Y tyrosine            4.3         61           3
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   latrophilin 2 precursor 
LPHN1                 0.637   latrophilin 1 isoform 2 precursor 
LPHN1                 0.635   latrophilin 1 isoform 1 precursor 
LPHN3                 0.601   latrophilin 3 precursor 
ELTD1                 0.137   EGF, latrophilin and seven transmembrane domain con...
CD97                  0.095   CD97 antigen isoform 3 precursor 
CD97                  0.095   CD97 antigen isoform 2 precursor 
CD97                  0.095   CD97 antigen isoform 1 precursor 
EMR3                  0.090   egf-like module-containing mucin-like receptor 3 [H...
EMR2                  0.084   egf-like module containing, mucin-like, hormone rece...
EMR2                  0.084   egf-like module containing, mucin-like, hormone rece...
EMR2                  0.084   egf-like module containing, mucin-like, hormone rece...
EMR2                  0.083   egf-like module containing, mucin-like, hormone rece...
EMR2                  0.083   egf-like module containing, mucin-like, hormone rece...
EMR2                  0.083   egf-like module containing, mucin-like, hormone rece...
EMR2                  0.083   egf-like module containing, mucin-like, hormone rece...
CELSR1                0.082   cadherin EGF LAG seven-pass G-type receptor 1 
EMR1                  0.080   egf-like module containing, mucin-like, hormone rece...
CELSR2                0.078   cadherin EGF LAG seven-pass G-type receptor 2 
GPR133                0.068   G protein-coupled receptor 133 
CELSR3                0.066   cadherin EGF LAG seven-pass G-type receptor 3 [Homo...
GPR112                0.065   G-protein coupled receptor 112 
OLFM1                 0.065   olfactomedin related ER localized protein isoform 1 ...
GPR126                0.061   G protein-coupled receptor 126 alpha 1 precursor [Ho...
GPR126                0.061   G protein-coupled receptor 126 alpha 2 precursor [Ho...
BAI1                  0.059   brain-specific angiogenesis inhibitor 1 precursor [...
OLFM3                 0.059   olfactomedin 3 
GPR126                0.059   G protein-coupled receptor 126 beta 1 precursor [Hom...
GPR126                0.059   G protein-coupled receptor 126 beta 2 precursor [Hom...
OLFML2A               0.058   olfactomedin-like 2A 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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