Guide to the Human Genome
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Name: SLC43A1 Sequence: fasta or formatted (559aa) NCBI GI: 4505971
Description:

solute carrier family 43, member 1

Referenced in:

Solute Carrier Families

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.7         43           2
 C cysteine            2.7         15           1
 D aspartate           2.9         16           1
 E glutamate           3.6         20           2
 F phenylalanine       6.4         36           2
 G glycine             7.9         44           2
 H histidine           1.3          7           1
 I isoleucine          4.7         26           2
 K lysine              2.9         16           2
 L leucine            14.8         83           3
 M methionine          3.6         20           1
 N asparagine          3.6         20           2
 P proline             4.7         26           1
 Q glutamine           4.1         23           3
 R arginine            3.9         22           3
 S serine              7.5         42           2
 T threonine           7.7         43           2
 V valine              5.7         32           2
 W tryptophan          1.6          9           2
 Y tyrosine            2.9         16           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   solute carrier family 43, member 1 
SLC43A2               0.556   solute carrier family 43, member 2 
SLC43A3               0.148   solute carrier family 43, member 3 
SLC43A3               0.148   solute carrier family 43, member 3 
SLC43A3               0.148   solute carrier family 43, member 3 
SLC16A11              0.008   solute carrier family 16, member 11 
SLC45A3               0.006   prostein 
SLC46A1               0.005   proton-coupled folate transporter 
SLC22A8               0.005   solute carrier family 22 member 8 
SLC16A13              0.005   monocarboxylate transporter 13 
SLC16A8               0.004   solute carrier family 16, member 8 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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