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Search of human proteins with 148886716
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|148886716 downstream of Stk11 [Homo sapiens]
(447 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|148886716 downstream of Stk11 [Homo sapiens] 913 0.0
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 44 4e-04
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 44 4e-04
gi|37595528 polyhomeotic-like 2 isoform a [Homo sapiens] 44 4e-04
gi|155969701 espin-like [Homo sapiens] 43 7e-04
gi|169206489 PREDICTED: hypothetical protein [Homo sapiens] 42 9e-04
gi|169205942 PREDICTED: hypothetical protein [Homo sapiens] 42 9e-04
gi|27436925 synoviolin 1 isoform a [Homo sapiens] 42 0.001
gi|4502951 collagen type III alpha 1 preproprotein [Homo sapiens] 42 0.001
gi|157743252 pecanex-like 3 [Homo sapiens] 42 0.001
gi|33667117 MICAL-like 2 isoform 1 [Homo sapiens] 42 0.001
gi|239749365 PREDICTED: hypothetical protein XP_002347014 [Homo ... 41 0.002
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 41 0.002
gi|7662046 myeloid/lymphoid or mixed-lineage leukemia 4 [Homo sa... 41 0.002
gi|27436927 synoviolin 1 isoform b [Homo sapiens] 41 0.003
gi|38158015 mastermind-like 3 [Homo sapiens] 41 0.003
gi|33286436 gametogenetin [Homo sapiens] 41 0.003
gi|112734870 hypothetical protein LOC57648 [Homo sapiens] 40 0.004
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] 40 0.004
gi|163965366 nascent polypeptide-associated complex alpha subuni... 40 0.004
gi|23510368 homeobox D11 [Homo sapiens] 40 0.006
gi|122937267 lemur tyrosine kinase 3 [Homo sapiens] 40 0.006
gi|209862765 RUN and SH3 domain containing 2 [Homo sapiens] 40 0.006
gi|55741719 RUN and SH3 domain containing 2 [Homo sapiens] 40 0.006
gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens] 40 0.006
gi|239758117 PREDICTED: hypothetical protein [Homo sapiens] 39 0.007
gi|60460889 Myb protein P42POP [Homo sapiens] 39 0.007
gi|224458284 Rho GTPase activating protein 23 [Homo sapiens] 39 0.010
gi|40538799 ataxin-1 ubiquitin-like interacting protein [Homo sa... 39 0.010
gi|7706501 WW domain binding protein 11 [Homo sapiens] 39 0.010
>gi|148886716 downstream of Stk11 [Homo sapiens]
Length = 447
Score = 913 bits (2359), Expect = 0.0
Identities = 447/447 (100%), Positives = 447/447 (100%)
Query: 1 MATAATTTTTTTATVALTTSWDNATGRPTAEPDPILDNYVLLVVVMSLFVGGTLVVLSGV 60
MATAATTTTTTTATVALTTSWDNATGRPTAEPDPILDNYVLLVVVMSLFVGGTLVVLSGV
Sbjct: 1 MATAATTTTTTTATVALTTSWDNATGRPTAEPDPILDNYVLLVVVMSLFVGGTLVVLSGV 60
Query: 61 LLLCKRCWDVHQRLNRAMEEAEKTTTTYLDNGTHPAQDPDFRGEDPECQDAETERFLSTS 120
LLLCKRCWDVHQRLNRAMEEAEKTTTTYLDNGTHPAQDPDFRGEDPECQDAETERFLSTS
Sbjct: 61 LLLCKRCWDVHQRLNRAMEEAEKTTTTYLDNGTHPAQDPDFRGEDPECQDAETERFLSTS 120
Query: 121 STGRRVSFNEAALFEQSRKTQDKGRRYTLTEGDFHHLKNARLTHLHLPPLKIVTIHECDS 180
STGRRVSFNEAALFEQSRKTQDKGRRYTLTEGDFHHLKNARLTHLHLPPLKIVTIHECDS
Sbjct: 121 STGRRVSFNEAALFEQSRKTQDKGRRYTLTEGDFHHLKNARLTHLHLPPLKIVTIHECDS 180
Query: 181 GEASSATTPHPATSPKATLAIFQPPGKALTGRSVGPSSALPGDPYNSAAGATDFAEISPS 240
GEASSATTPHPATSPKATLAIFQPPGKALTGRSVGPSSALPGDPYNSAAGATDFAEISPS
Sbjct: 181 GEASSATTPHPATSPKATLAIFQPPGKALTGRSVGPSSALPGDPYNSAAGATDFAEISPS 240
Query: 241 ASSDSGEGTSLDAGTRSTKAGGPGAAAGPGEAGPGSGAGTVLQFLTRLRRHASLDGASPY 300
ASSDSGEGTSLDAGTRSTKAGGPGAAAGPGEAGPGSGAGTVLQFLTRLRRHASLDGASPY
Sbjct: 241 ASSDSGEGTSLDAGTRSTKAGGPGAAAGPGEAGPGSGAGTVLQFLTRLRRHASLDGASPY 300
Query: 301 FKVKKWKLEPSQRAASLDTRGSPKRHHFQRQRAASESTEQEEGDAPQEDFIQYIARAGDA 360
FKVKKWKLEPSQRAASLDTRGSPKRHHFQRQRAASESTEQEEGDAPQEDFIQYIARAGDA
Sbjct: 301 FKVKKWKLEPSQRAASLDTRGSPKRHHFQRQRAASESTEQEEGDAPQEDFIQYIARAGDA 360
Query: 361 VAFPHPRPFLASPPPALGRYFSVDGGARGGPVGPCPPSPPPRRPRERSPGPVDTRSPASS 420
VAFPHPRPFLASPPPALGRYFSVDGGARGGPVGPCPPSPPPRRPRERSPGPVDTRSPASS
Sbjct: 361 VAFPHPRPFLASPPPALGRYFSVDGGARGGPVGPCPPSPPPRRPRERSPGPVDTRSPASS 420
Query: 421 GKAPPRGGLTGATSPAWTRGGKQGETG 447
GKAPPRGGLTGATSPAWTRGGKQGETG
Sbjct: 421 GKAPPRGGLTGATSPAWTRGGKQGETG 447
>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 855
Score = 43.5 bits (101), Expect = 4e-04
Identities = 62/260 (23%), Positives = 86/260 (33%), Gaps = 18/260 (6%)
Query: 180 SGEASSATTPHPATSPKATLAIFQPPGKALTGRSVGPSSALPGDPYNSAAGATDFAEISP 239
+ A TP P SP+ PP R +G + A+ P AG A I
Sbjct: 18 AARAPGLLTPRPPGSPRPP-----PPVTPAALRVLGAAGAVGRKPLAERAGGIGGATIPE 72
Query: 240 SASSDSGEGTSLDAGTRSTKAGGPGAAAGPGEAGPGSGAGTVLQFLTRLRRHASLDGASP 299
SA G + AGT S A+G GE P + T ++ R + P
Sbjct: 73 SAPR---AGPTRSAGTSSRNPASRPPASGRGERAPPA-KNTSPGPVSSPGRASGTTRPGP 128
Query: 300 YFKVKKWKLEPSQRAASLDTRGSPKRHHFQRQRAASESTEQEEGDAPQEDFIQYIARAGD 359
+ K ++ + A +PKR A T P + AG
Sbjct: 129 LGQ-KGLRISAEETVARGKATEAPKRSALSA--GARRDTSGPTPGTPSPAMARRSRAAGT 185
Query: 360 AVAFPHPRPFLASPPPALGRYFSVDGGARGGPVGPCPPSPPPRRPRE----RSPGPVDTR 415
V P P P PP G SV + P P + RRP + P
Sbjct: 186 EVGLPRPAPSARPRPPTEGPRKSVSSASEHSTTEPSPAA--RRRPSAGGGLQRPASRSLS 243
Query: 416 SPASSGKAPPRGGLTGATSP 435
S A+ +P R G + +P
Sbjct: 244 SSATPLSSPARSGPSARGTP 263
Score = 34.7 bits (78), Expect = 0.18
Identities = 29/98 (29%), Positives = 35/98 (35%), Gaps = 21/98 (21%)
Query: 364 PHPRPFLASP--PPALGRYFSVDGGARGGPVGPCPPSPPPRRPRERSPGPVDTRSPASSG 421
P P L +P PP G SV G + P PP PP R P GP +S+
Sbjct: 577 PPASPTLQAPRRPPTPGPDTSVSGPRLTLALAPGPPPPPSRSPSSTLSGPDLAGHSSSAT 636
Query: 422 KAP---------PRGGLTGATSP----------AWTRG 440
P P GG + P AW+RG
Sbjct: 637 STPEELRGYDSGPEGGAAASPPPDAELAACHPAAWSRG 674
Score = 29.3 bits (64), Expect = 7.6
Identities = 31/110 (28%), Positives = 38/110 (34%), Gaps = 18/110 (16%)
Query: 179 DSGEASSATTPHPATSPKATLAIFQP------PGKALTGRSVGPSSALPGDPYNSAAGAT 232
DSG A P P A LA P P L R P + LP P A
Sbjct: 646 DSGPEGGAAASPP---PDAELAACHPAAWSRGPAPPLAFRGA-PGAPLPWPPATGPGSAD 701
Query: 233 DFAEISPSASSDSGEGT--SLDAGTRSTKAGGPGAAAGPGEAGPGSGAGT 280
I + +S +LD G PG + G AG G+GA +
Sbjct: 702 GLCTIYETEGPESATPAPGALDPGP------SPGTSGGKAAAGAGAGASS 745
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 1124
Score = 43.5 bits (101), Expect = 4e-04
Identities = 62/260 (23%), Positives = 86/260 (33%), Gaps = 18/260 (6%)
Query: 180 SGEASSATTPHPATSPKATLAIFQPPGKALTGRSVGPSSALPGDPYNSAAGATDFAEISP 239
+ A TP P SP+ PP R +G + A+ P AG A I
Sbjct: 18 AARAPGLLTPRPPGSPRPP-----PPVTPAALRVLGAAGAVGRKPLAERAGGIGGATIPE 72
Query: 240 SASSDSGEGTSLDAGTRSTKAGGPGAAAGPGEAGPGSGAGTVLQFLTRLRRHASLDGASP 299
SA G + AGT S A+G GE P + T ++ R + P
Sbjct: 73 SAPR---AGPTRSAGTSSRNPASRPPASGRGERAPPA-KNTSPGPVSSPGRASGTTRPGP 128
Query: 300 YFKVKKWKLEPSQRAASLDTRGSPKRHHFQRQRAASESTEQEEGDAPQEDFIQYIARAGD 359
+ K ++ + A +PKR A T P + AG
Sbjct: 129 LGQ-KGLRISAEETVARGKATEAPKRSALSA--GARRDTSGPTPGTPSPAMARRSRAAGT 185
Query: 360 AVAFPHPRPFLASPPPALGRYFSVDGGARGGPVGPCPPSPPPRRPRE----RSPGPVDTR 415
V P P P PP G SV + P P + RRP + P
Sbjct: 186 EVGLPRPAPSARPRPPTEGPRKSVSSASEHSTTEPSPAA--RRRPSAGGGLQRPASRSLS 243
Query: 416 SPASSGKAPPRGGLTGATSP 435
S A+ +P R G + +P
Sbjct: 244 SSATPLSSPARSGPSARGTP 263
Score = 34.7 bits (78), Expect = 0.18
Identities = 29/98 (29%), Positives = 35/98 (35%), Gaps = 21/98 (21%)
Query: 364 PHPRPFLASP--PPALGRYFSVDGGARGGPVGPCPPSPPPRRPRERSPGPVDTRSPASSG 421
P P L +P PP G SV G + P PP PP R P GP +S+
Sbjct: 846 PPASPTLQAPRRPPTPGPDTSVSGPRLTLALAPGPPPPPSRSPSSTLSGPDLAGHSSSAT 905
Query: 422 KAP---------PRGGLTGATSP----------AWTRG 440
P P GG + P AW+RG
Sbjct: 906 STPEELRGYDSGPEGGAAASPPPDAELAACHPAAWSRG 943
Score = 29.3 bits (64), Expect = 7.6
Identities = 31/110 (28%), Positives = 38/110 (34%), Gaps = 18/110 (16%)
Query: 179 DSGEASSATTPHPATSPKATLAIFQP------PGKALTGRSVGPSSALPGDPYNSAAGAT 232
DSG A P P A LA P P L R P + LP P A
Sbjct: 915 DSGPEGGAAASPP---PDAELAACHPAAWSRGPAPPLAFRGA-PGAPLPWPPATGPGSAD 970
Query: 233 DFAEISPSASSDSGEGT--SLDAGTRSTKAGGPGAAAGPGEAGPGSGAGT 280
I + +S +LD G PG + G AG G+GA +
Sbjct: 971 GLCTIYETEGPESATPAPGALDPGP------SPGTSGGKAAAGAGAGASS 1014
>gi|37595528 polyhomeotic-like 2 isoform a [Homo sapiens]
Length = 858
Score = 43.5 bits (101), Expect = 4e-04
Identities = 63/273 (23%), Positives = 88/273 (32%), Gaps = 32/273 (11%)
Query: 161 RLTHLHLPPLKIVTIHECDSGEASSATTPHPATSPKATLAIFQPPGKALTG----RSVGP 216
R L P V + + G S A P PA TL Q P A +G + V P
Sbjct: 189 RAQMLIFTPTATVATVQPELGTGSPARPPTPAQVQNLTLRTQQTPAAAASGPTPTQPVLP 248
Query: 217 SSALPGDPYNSAAGATDFAEISPSASSDSGEGTSLDAGTRSTKAGGPGAAAGPGEAGPGS 276
S AL P S T + + +S +G + G G ++ PG +
Sbjct: 249 SLALKPTPGGSQPLPTPAQSRNTAQASPAGAKPGIADSVMEPHKKGDGNSSVPGSMEGRA 308
Query: 277 GAGTVLQFLTRLRRHASLDGASPYFKVKKWKLEPSQRAASLDTRGSPKRHHFQRQRAASE 336
G L R A P +L+P Q P H Q Q +
Sbjct: 309 G----------LSRTVPAVAAHPLIAPAYAQLQPHQLLP------QPSSKHLQPQFVIQQ 352
Query: 337 STEQEEGDAPQEDFIQYIARAGDAVAFPHPRPFLASPPPALGRYFSVDGGARGGPVGPCP 396
+ ++ P + + A PHP+ SP AL A P+GP
Sbjct: 353 QPQPQQQQPPPQQSRPVLQ------AEPHPQLASVSPSVAL----QPSSEAHAMPLGPVT 402
Query: 397 PSPPPRRPRE--RSPGPVDTRSPASSGKAPPRG 427
P+ P + P PG P + P G
Sbjct: 403 PALPLQCPTANLHKPGGSQQCHPPTPDTGPQNG 435
>gi|155969701 espin-like [Homo sapiens]
Length = 1005
Score = 42.7 bits (99), Expect = 7e-04
Identities = 33/99 (33%), Positives = 44/99 (44%), Gaps = 7/99 (7%)
Query: 350 FIQYIARAGDAVAFPHPRPFLASPPPALGRYFSVDGGARGGPVGPCPPSPPPRRPRERSP 409
+++ +A+ + P P PF PPP L S++ G RGGP GP PSP P P
Sbjct: 322 YLREVAQPVPLLMTPPPPPF--PPPPLLATRRSLEDGRRGGP-GPGNPSPMSLSP--AWP 376
Query: 410 GPVDTRSPAS--SGKAPPRGGLTGATSPAWTRGGKQGET 446
G D P + APPR + P T G+T
Sbjct: 377 GHPDQPLPREQMTSPAPPRIITSATADPEGTETALAGDT 415
>gi|169206489 PREDICTED: hypothetical protein [Homo sapiens]
Length = 564
Score = 42.4 bits (98), Expect = 9e-04
Identities = 67/283 (23%), Positives = 94/283 (33%), Gaps = 34/283 (12%)
Query: 183 ASSATTPHPATSPKATLAIFQPPGKALTGRSVGPSSALPGDPYNSAAGATDFAEISPSAS 242
A S P PA++ + L + G G GP + PG +S AGA
Sbjct: 130 AQSCGGPAPASALRRPLTQWDASGGGGRGSHSGPRAGTPGGGRSSRAGAR---------- 179
Query: 243 SDSGEGTSLDAGTRSTKAGGPGAAAGPGEAGPGSGAGTVLQFLTRLRRHASLDGASPYFK 302
T L + G G G + GSG + L RH GA +
Sbjct: 180 ----RKTPLSLCPLKLRKGSSRRCQGLGSSWGGSGTPPPPRAL--WNRHGGAAGARAQVR 233
Query: 303 VKKWKLEP-------SQRAASLDTR----GSPKRHHFQRQRAASESTEQEEGDAPQEDFI 351
+ + P S A + TR G +R F + S S + G+ + +
Sbjct: 234 GSEKRACPGSTLPPSSVLAGCVGTRARGHGGVQRQRFSAPSSHSTSGGRPTGERSSREPL 293
Query: 352 QYIARAGDAVAFPHPRPFLASPPPALGRYFSVDGGARGGPVGPCPPSPPPRRPRERSPGP 411
++A A A P R ASPP + + GG R V E P
Sbjct: 294 LDPSKAARASALPTARVAHASPPSLAAAQWRLGGGKRKPTVLKGAVRTDLSTAEEEDPRS 353
Query: 412 VDTRSPASS----GKAPPRGGLTGA---TSPAWTRGGKQGETG 447
PA +A GG +GA +P+ R GK G
Sbjct: 354 GRALEPAQGSELWARAERHGGSSGARTLPTPSRARPGKPAPRG 396
Score = 29.6 bits (65), Expect = 5.8
Identities = 21/59 (35%), Positives = 26/59 (44%), Gaps = 4/59 (6%)
Query: 391 PVGPCPPSPPPRRPRERSPGPVDTRSPASSGKAPPRGGLTG----ATSPAWTRGGKQGE 445
P+ P PPR P R+ GP S +AP L G A SPA GG++ E
Sbjct: 456 PLSSPAPQSPPRSPSVRAFGPRLGAGRLSCPQAPRAAALPGIAVLAPSPAHDWGGQRCE 514
>gi|169205942 PREDICTED: hypothetical protein [Homo sapiens]
Length = 564
Score = 42.4 bits (98), Expect = 9e-04
Identities = 67/283 (23%), Positives = 94/283 (33%), Gaps = 34/283 (12%)
Query: 183 ASSATTPHPATSPKATLAIFQPPGKALTGRSVGPSSALPGDPYNSAAGATDFAEISPSAS 242
A S P PA++ + L + G G GP + PG +S AGA
Sbjct: 130 AQSCGGPAPASALRRPLTQWDASGGGGRGSHSGPRAGTPGGGRSSRAGAR---------- 179
Query: 243 SDSGEGTSLDAGTRSTKAGGPGAAAGPGEAGPGSGAGTVLQFLTRLRRHASLDGASPYFK 302
T L + G G G + GSG + L RH GA +
Sbjct: 180 ----RKTPLSLCPLKLRKGSSRRCQGLGSSWGGSGTPPPPRAL--WNRHGGAAGARAQVR 233
Query: 303 VKKWKLEP-------SQRAASLDTR----GSPKRHHFQRQRAASESTEQEEGDAPQEDFI 351
+ + P S A + TR G +R F + S S + G+ + +
Sbjct: 234 GSEKRACPGSTLPPSSVLAGCVGTRARGHGGVQRQRFSAPSSHSTSGGRPTGERSSREPL 293
Query: 352 QYIARAGDAVAFPHPRPFLASPPPALGRYFSVDGGARGGPVGPCPPSPPPRRPRERSPGP 411
++A A A P R ASPP + + GG R V E P
Sbjct: 294 LDPSKAARASALPTARVAHASPPSLAAAQWRLGGGKRKPTVLKGAVRTDLSTAEEEDPRS 353
Query: 412 VDTRSPASS----GKAPPRGGLTGA---TSPAWTRGGKQGETG 447
PA +A GG +GA +P+ R GK G
Sbjct: 354 GRALEPAQGSELWARAERHGGSSGARTLPTPSRARPGKPAPRG 396
Score = 29.6 bits (65), Expect = 5.8
Identities = 21/59 (35%), Positives = 26/59 (44%), Gaps = 4/59 (6%)
Query: 391 PVGPCPPSPPPRRPRERSPGPVDTRSPASSGKAPPRGGLTG----ATSPAWTRGGKQGE 445
P+ P PPR P R+ GP S +AP L G A SPA GG++ E
Sbjct: 456 PLSSPAPQSPPRSPSVRAFGPRLGAGRLSCPQAPRAAALPGIAVLAPSPAHDWGGQRCE 514
>gi|27436925 synoviolin 1 isoform a [Homo sapiens]
Length = 616
Score = 42.0 bits (97), Expect = 0.001
Identities = 33/93 (35%), Positives = 42/93 (45%), Gaps = 8/93 (8%)
Query: 189 PHPATSPKATLAIFQPPGKALTGRSVGPSSALPGDPYNSAAGATDFAEISPSASSDSGEG 248
P P P+ L F PPG +GP +P P + A A S + S SG
Sbjct: 364 PQPPNFPQGLLPPF-PPGMFPLWPPMGPFPPVPPPPSSGEAVAPP--STSAALSRPSGAA 420
Query: 249 TSLDAGTRST----KAGGPGAAAGPGEAGPGSG 277
T+ AGT +T A GPG+ + P EAGP G
Sbjct: 421 TTTAAGTSATAASATASGPGSGSAP-EAGPAPG 452
Score = 34.7 bits (78), Expect = 0.18
Identities = 27/82 (32%), Positives = 31/82 (37%), Gaps = 4/82 (4%)
Query: 364 PHPRPFLASPP---PALGRYFSVDGGARGGPVGPCPPSPPPRRPRER-SPGPVDTRSPAS 419
PHP P L PP L F P+GP PP PPP E +P
Sbjct: 357 PHPPPLLPQPPNFPQGLLPPFPPGMFPLWPPMGPFPPVPPPPSSGEAVAPPSTSAALSRP 416
Query: 420 SGKAPPRGGLTGATSPAWTRGG 441
SG A T AT+ + T G
Sbjct: 417 SGAATTTAAGTSATAASATASG 438
>gi|4502951 collagen type III alpha 1 preproprotein [Homo sapiens]
Length = 1466
Score = 41.6 bits (96), Expect = 0.001
Identities = 79/274 (28%), Positives = 91/274 (33%), Gaps = 43/274 (15%)
Query: 181 GEASSATTPHPATSPKATLAIFQPPGKALTGRSVGPSSALPGDPYNSAAGATDFAEISPS 240
GE S P A P A + PPG GPS + D AG T A SP
Sbjct: 861 GERGSPGGPGAAGFPGAR-GLPGPPGSNGNPGPPGPSGSPGKDGPPGPAGNTG-APGSPG 918
Query: 241 ASSDSGEGTSLDAGTRSTKAGGPGAAAGPGEAGPGSGAGTVLQFLTRLRRHASLDGASPY 300
S G DAG K G PGA PG GP AG +T R A G
Sbjct: 919 VSGPKG-----DAGQPGEK-GSPGAQGPPGAPGPLGIAG-----ITGARGLAGPPGMP-- 965
Query: 301 FKVKKWKLEPSQRAASLDTRGSPKRHHFQRQ--RAASESTEQEEGDAPQEDFIQYIARAG 358
RGSP + + + + E G + AG
Sbjct: 966 -----------------GPRGSPGPQGVKGESGKPGANGLSGERGPPGPQGLPGLAGTAG 1008
Query: 359 DAVAFPHPR----PFLASPPPALG-RYFSVDGGARGGPVGPCPPSPPPRRPRERSPGPVD 413
+ +P P P G R + GA G P P PP P P +S G
Sbjct: 1009 EPGRDGNPGSDGLPGRDGSPGGKGDRGENGSPGAPGAPGHPGPPGPV--GPAGKS-GDRG 1065
Query: 414 TRSPASSGKAPPRGGLTGATSPAWTRGGKQGETG 447
PA AP G GA P RG K GETG
Sbjct: 1066 ESGPAGPAGAPGPAGSRGAPGPQGPRGDK-GETG 1098
Score = 37.0 bits (84), Expect = 0.036
Identities = 25/68 (36%), Positives = 28/68 (41%), Gaps = 7/68 (10%)
Query: 386 GARGGPVGPCPPSPPPRRPRERSPGPVDTRSP----ASSGKAPPRG--GLTGATSPAWTR 439
G RGGP GP P PP + GP P +G P+G GL G P
Sbjct: 594 GERGGPGGPGPQGPPGKNGETGPQGPPGPTGPGGDKGDTGPPGPQGLQGLPGTGGPP-GE 652
Query: 440 GGKQGETG 447
GK GE G
Sbjct: 653 NGKPGEPG 660
Score = 37.0 bits (84), Expect = 0.036
Identities = 58/252 (23%), Positives = 79/252 (31%), Gaps = 52/252 (20%)
Query: 204 PPG-KALTGRSVGPSSALPGDPYNSAAGATDFAEISPSASSDSGEGTSLDAGTRSTKAGG 262
PPG + L G + ++ PG N + + SP D GE S G
Sbjct: 994 PPGPQGLPG--LAGTAGEPGRDGNPGSDGLPGRDGSPGGKGDRGENGS---------PGA 1042
Query: 263 PGAAAGPGEAGPGSGAGTVLQFLTRLRRHASLDGASPYFKVKKWKLEPSQRAASLDTRGS 322
PGA PG GP AG + + P P+ +RG+
Sbjct: 1043 PGAPGHPGPPGPVGPAG----------KSGDRGESGP--------AGPAGAPGPAGSRGA 1084
Query: 323 PKRHHFQRQRAASESTEQEEGDAPQEDFIQYIARAGDAVAFPHPRPFLASPPPALGRYFS 382
P + ++G+ + G FP SP PA G+ +
Sbjct: 1085 P----------GPQGPRGDKGETGERGAAGIKGHRG----FPGNPGAPGSPGPA-GQQGA 1129
Query: 383 VDGGARGGPVGPCPPSPPPRRPRERS-------PGPVDTRSPASSGKAPPRGGLTGATSP 435
+ GP GP PS PP + PGP R S +P G G P
Sbjct: 1130 IGSPGPAGPRGPVGPSGPPGKDGTSGHPGPIGPPGPRGNRGERGSEGSPGHPGQPGPPGP 1189
Query: 436 AWTRGGKQGETG 447
G G G
Sbjct: 1190 PGAPGPCCGGVG 1201
Score = 33.1 bits (74), Expect = 0.53
Identities = 75/274 (27%), Positives = 95/274 (34%), Gaps = 49/274 (17%)
Query: 204 PPGKALTGRSVGPSSALPGDPYNSAAGATDFAEISPSASSDSGEGTSLDAGTRSTKAGGP 263
PPG + GP PG P AAG + G D G + GGP
Sbjct: 700 PPGPEGGKGAAGP----PGPP--GAAGTPGLQGMPGERGGLGSPGPKGDKG----EPGGP 749
Query: 264 GAAAGPGEAGPGSGAGTVLQFLTRLRRHASLDGASPYFK-VKKWKLEPSQRAASLDTRGS 322
GA PG+ GP G + + +G +P + + P +R + G
Sbjct: 750 GADGVPGKDGPRGPTGPIGPPGPAGQPGDKGEGGAPGLPGIAGPRGSPGERGET----GP 805
Query: 323 PKRHHFQRQRAAS-ESTEQEEGDAPQEDFIQYIARAG-DAVAFPHPRPFLASPP---PAL 377
P F + E + E AP E G VA P A PP
Sbjct: 806 PGPAGFPGAPGQNGEPGGKGERGAPGEK-----GEGGPPGVAGPPGGSGPAGPPGPQGVK 860
Query: 378 GRYFSVDG-------GARG--GPVG----PCPPSPPPRRPRERSPGPV-DTRSPASSGKA 423
G S G GARG GP G P PP P ++ PGP +T +P S G +
Sbjct: 861 GERGSPGGPGAAGFPGARGLPGPPGSNGNPGPPGPSGSPGKDGPPGPAGNTGAPGSPGVS 920
Query: 424 PPRG--------GLTGATSPAWTRG--GKQGETG 447
P+G G GA P G G G TG
Sbjct: 921 GPKGDAGQPGEKGSPGAQGPPGAPGPLGIAGITG 954
Score = 32.3 bits (72), Expect = 0.90
Identities = 25/66 (37%), Positives = 28/66 (42%), Gaps = 12/66 (18%)
Query: 386 GARGGPVGPCPPSPPPRRPRERSPGPVDTRSPASSGKAPPRG--GLTGATSPAWTRG--G 441
G+ GGP P PP + PGP P SG PRG G+ G P G G
Sbjct: 540 GSPGGPGSDGKPGPPGSQGESGRPGP-----PGPSG---PRGQPGVMGFPGPKGNDGAPG 591
Query: 442 KQGETG 447
K GE G
Sbjct: 592 KNGERG 597
Score = 31.6 bits (70), Expect = 1.5
Identities = 25/76 (32%), Positives = 29/76 (38%), Gaps = 14/76 (18%)
Query: 386 GARGGPVGPCPPSPPPRRPRERSPG----------PVDTRSPASSGKAPPRG--GLTGAT 433
GARG P PP PP SPG P +P G+ P+G G G
Sbjct: 324 GARGSDGQPGPPGPPGTAGFPGSPGAKGEVGPAGSPGSNGAPGQRGEPGPQGHAGAQGPP 383
Query: 434 SPAWTRG--GKQGETG 447
P G G +GE G
Sbjct: 384 GPPGINGSPGGKGEMG 399
Score = 31.2 bits (69), Expect = 2.0
Identities = 25/69 (36%), Positives = 28/69 (40%), Gaps = 7/69 (10%)
Query: 385 GGARGGPVGPCPPSPPPRRPRERSPG----PVDTRSPASSGKAPPRG--GLTGATSPAWT 438
GG G P PP PP PG P P G+A P G G GA P+
Sbjct: 167 GGLAGYPGPAGPPGPPGPPGTSGHPGSPGSPGYQGPPGEPGQAGPSGPPGPPGAIGPSGP 226
Query: 439 RGGKQGETG 447
GK GE+G
Sbjct: 227 -AGKDGESG 234
Score = 28.9 bits (63), Expect = 9.9
Identities = 31/106 (29%), Positives = 37/106 (34%), Gaps = 14/106 (13%)
Query: 180 SGEASSATTPHPATSPKATLAIFQPPG----KALTGRSVGPS-SALPGDPYNSA-AGATD 233
+GE P P T P PPG + L G P + PG+P AGA
Sbjct: 611 NGETGPQGPPGP-TGPGGDKGDTGPPGPQGLQGLPGTGGPPGENGKPGEPGPKGDAGA-- 667
Query: 234 FAEISPSASSDSGEGTSLDAGTRSTKAGGPGAAAGPGEAGPGSGAG 279
P A G+ + AG PG G G GP G G
Sbjct: 668 -----PGAPGGKGDAGAPGERGPPGLAGAPGLRGGAGPPGPEGGKG 708
>gi|157743252 pecanex-like 3 [Homo sapiens]
Length = 2034
Score = 41.6 bits (96), Expect = 0.001
Identities = 27/77 (35%), Positives = 35/77 (45%), Gaps = 5/77 (6%)
Query: 373 PPPALGRYFSVDGGARGGPVGPCPPSPPPRRPRERSPGPVDTRSPASSGKAPPRGGLTGA 432
P P G S+ G G P P PPPR P P+ T P +S PP GL +
Sbjct: 1873 PGPGWGPRSSLSGSGDGRPP-PLLQWPPPRLPGPPPASPIPTEGPRTS--RPPGPGLLSS 1929
Query: 433 TSPA--WTRGGKQGETG 447
P+ W+ GG++G G
Sbjct: 1930 EGPSGKWSLGGRKGLGG 1946
Score = 28.9 bits (63), Expect = 9.9
Identities = 20/67 (29%), Positives = 25/67 (37%), Gaps = 10/67 (14%)
Query: 366 PRPFLASPPPALGRYFSVDGGARGGPVGPCPPSPPPRRPRERSPGPVDTRSPASSGKAPP 425
P P L PPP L G P P+ PR R PG + + P+
Sbjct: 1891 PPPLLQWPPPRLP----------GPPPASPIPTEGPRTSRPPGPGLLSSEGPSGKWSLGG 1940
Query: 426 RGGLTGA 432
R GL G+
Sbjct: 1941 RKGLGGS 1947
>gi|33667117 MICAL-like 2 isoform 1 [Homo sapiens]
Length = 904
Score = 41.6 bits (96), Expect = 0.001
Identities = 73/281 (25%), Positives = 106/281 (37%), Gaps = 44/281 (15%)
Query: 180 SGEASSATTPHPATSPKATLA------IFQ----PPGKALTGRSVGPSSALPGDPYNSAA 229
S S+AT PA +P A+ FQ PPG +L+GR PS L D +S
Sbjct: 393 SSSTSAATVDPPAWTPSASRTQQARNKFFQTSAVPPGTSLSGRGPTPSLVLSKD--SSKE 450
Query: 230 GATDFAEISPSASSDS-----GEGTSLDAGTRSTKAGGPGAAAGPGEAGPGSGAGTVLQF 284
A +F + + SA ++ G + A S++ A P S + VL
Sbjct: 451 QARNFLKQALSALEEAGAPAPGRPSPATAAVPSSQPKTEAPQASPLAKPLQSSSPRVLGL 510
Query: 285 LTRLRRHASLDGASPYFKVKKWKLEPSQR-----AASLDTRGSPKRHHFQRQRAASESTE 339
+R+ A L +S + L P+ R ++ + G+ R + A +ST
Sbjct: 511 PSRMEPPAPLSTSS---TSQASALPPAGRRNLAESSGVGRVGAGSRPKPEAPMAKGKSTT 567
Query: 340 ------------QEEGDAPQEDFIQYIARAGDAVAFPHPRPFLASPPPALGRY-FSVDGG 386
QE+G A ++ + R A P+ A P G V G
Sbjct: 568 LTQDMSTSLQEGQEDGPAGWRANLKPVDRRSPAERTLKPKEPRALAEPRAGEAPRKVSGS 627
Query: 387 ARGGPVGPCPPSPPPRRPRERSPGP-VDTRSPASSGKAPPR 426
G P P R PR SPGP + RSP +PPR
Sbjct: 628 FAGSVHITLTPVRPDRTPRPASPGPSLPARSP-----SPPR 663
Score = 31.2 bits (69), Expect = 2.0
Identities = 56/239 (23%), Positives = 80/239 (33%), Gaps = 42/239 (17%)
Query: 181 GEASSATTPHPATSPKATLAIFQPPGKALTGRSVG----PSSALPGDPYNSAAGATDFAE 236
G S AT P++ PK P K L S PS P P S + + +
Sbjct: 472 GRPSPATAAVPSSQPKTEAPQASPLAKPLQSSSPRVLGLPSRMEPPAPL-STSSTSQASA 530
Query: 237 ISPSASSDSGEGTSLDAGTRSTKAGGPGAAAGPGEAGP-GSGAGTVL-QFLTRLRRHASL 294
+ P+ + E S+ G GA + P P G T L Q ++ +
Sbjct: 531 LPPAGRRNLAE---------SSGVGRVGAGSRPKPEAPMAKGKSTTLTQDMSTSLQEGQE 581
Query: 295 DGASPYFKVKKWKLEPSQRAASLDTRGSPKRHHFQRQRAASESTEQEEGDAPQEDFIQYI 354
DG + + + L+P R + + PK + A E+ + G I
Sbjct: 582 DGPAGW----RANLKPVDRRSPAERTLKPKEPRALAEPRAGEAPRKVSGSFAGSVHITLT 637
Query: 355 ARAGDAVAFPHPRPFLASPPPALGRYFSVDGGARGGPVGPCPPSPPPRRPRERSPGPVD 413
D PRP ASP P+L P PPRR R P +D
Sbjct: 638 PVRPDRT----PRP--ASPGPSL----------------PARSPSPPRRRRLAVPASLD 674
>gi|239749365 PREDICTED: hypothetical protein XP_002347014 [Homo
sapiens]
Length = 190
Score = 41.2 bits (95), Expect = 0.002
Identities = 40/139 (28%), Positives = 57/139 (41%), Gaps = 13/139 (9%)
Query: 262 GPGAAAGPGEAGPGSGAGTVLQFLTRLRRHASLDGASPYFKVKKWKLEPSQRAASLDTRG 321
G G AGPG++GPG G GT + R S G SP ++ + ++ A
Sbjct: 26 GRGGGAGPGQSGPGHGQGTATSW---ARTGESGAGPSPAWRRCAGEASRGRQRARSGPPK 82
Query: 322 SPKRHHFQRQRAASESTEQEEGDAPQEDFIQYIARAGDAVAFPHPRPFLASPPPALGRY- 380
SP+R Q + A ++ + +ED ARAGD PR PP R
Sbjct: 83 SPRRPDAQLRAARTQRARAQTPQLRRED-----ARAGDG----WPRREEDDVPPEEKRLR 133
Query: 381 FSVDGGARGGPVGPCPPSP 399
++GG+ G P P
Sbjct: 134 LLLEGGSAQPEDGEDAPRP 152
>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
sapiens]
Length = 816
Score = 41.2 bits (95), Expect = 0.002
Identities = 60/261 (22%), Positives = 81/261 (31%), Gaps = 29/261 (11%)
Query: 180 SGEASSATTPHPATSPKATLAIFQPPGKALTGRSVGPSSALPGDPYNSAAGATDFAEISP 239
+ A TP P SP+ PP R +G + A+ P AG A I
Sbjct: 18 AARAPGLLTPRPPGSPRPP-----PPVTPAALRVLGAAGAVGRKPLAERAGGIGGATIPE 72
Query: 240 SASSDSGEGTSLDAGTRSTKAGGPGAAAGPGE-AGPGSGAGTVLQFLTRLRRHASLDGAS 298
SA TS + + P PG + PG +GT R L
Sbjct: 73 SAPRAGPTRTSRPPASGRGERAPPAKNTSPGPVSSPGRASGTT--------RPGPLGQ-- 122
Query: 299 PYFKVKKWKLEPSQRAASLDTRGSPKRHHFQRQRAASESTEQEEGDAPQEDFIQYIARAG 358
K ++ + A +PKR A T P + AG
Sbjct: 123 -----KGLRISAEETVARGKATEAPKRSALSA--GARRDTSGPTPGTPSPAMARRSRAAG 175
Query: 359 DAVAFPHPRPFLASPPPALGRYFSVDGGARGGPVGPCPPSPPPRRPRE----RSPGPVDT 414
V P P P PP G SV + P P + RRP + P
Sbjct: 176 TEVGLPRPAPSARPRPPTEGPRKSVSSASEHSTTEPSPAA--RRRPSAGGGLQRPASRSL 233
Query: 415 RSPASSGKAPPRGGLTGATSP 435
S A+ +P R G + +P
Sbjct: 234 SSSATPLSSPARSGPSARGTP 254
Score = 34.7 bits (78), Expect = 0.18
Identities = 29/98 (29%), Positives = 35/98 (35%), Gaps = 21/98 (21%)
Query: 364 PHPRPFLASP--PPALGRYFSVDGGARGGPVGPCPPSPPPRRPRERSPGPVDTRSPASSG 421
P P L +P PP G SV G + P PP PP R P GP +S+
Sbjct: 538 PPASPTLQAPRRPPTPGPDTSVSGPRLTLALAPGPPPPPSRSPSSTLSGPDLAGHSSSAT 597
Query: 422 KAP---------PRGGLTGATSP----------AWTRG 440
P P GG + P AW+RG
Sbjct: 598 STPEELRGYDSGPEGGAAASPPPDAELAACHPAAWSRG 635
Score = 29.3 bits (64), Expect = 7.6
Identities = 31/110 (28%), Positives = 38/110 (34%), Gaps = 18/110 (16%)
Query: 179 DSGEASSATTPHPATSPKATLAIFQP------PGKALTGRSVGPSSALPGDPYNSAAGAT 232
DSG A P P A LA P P L R P + LP P A
Sbjct: 607 DSGPEGGAAASPP---PDAELAACHPAAWSRGPAPPLAFRGA-PGAPLPWPPATGPGSAD 662
Query: 233 DFAEISPSASSDSGEGT--SLDAGTRSTKAGGPGAAAGPGEAGPGSGAGT 280
I + +S +LD G PG + G AG G+GA +
Sbjct: 663 GLCTIYETEGPESATPAPGALDPGP------SPGTSGGKAAAGAGAGASS 706
>gi|7662046 myeloid/lymphoid or mixed-lineage leukemia 4 [Homo
sapiens]
Length = 2715
Score = 41.2 bits (95), Expect = 0.002
Identities = 53/243 (21%), Positives = 80/243 (32%), Gaps = 67/243 (27%)
Query: 254 GTRSTKAGGPGAAAGPGEAGPGSGAGT--VLQFLTRL----------------------- 288
G + + GG + G G G G G G V++F++R
Sbjct: 275 GPGTPRRGGQSSRGGRGGRGRGRGGGLPFVIKFVSRAKKVKMGQLSLGLESGQGQGQHEE 334
Query: 289 -------RRHASLDGASPYFKVKKWKLEPSQRAASLDTRGSPKRHHFQRQRAASE----S 337
RR S G SP +K ++ KL+ + + K + +RA +E +
Sbjct: 335 SWQDVPQRRVGSGQGGSPCWKKQEQKLDDEEEEKK-EEEEKDKEGEEKEERAVAEEMMPA 393
Query: 338 TEQEEGDAPQEDFIQYIARAGDAVAFPH---PRPFLASPPPALGRYFSVDGGARGGPVGP 394
E+EE P + P P P PPP + P P
Sbjct: 394 AEKEEAKLPPPPLTPPAPSPPPPLPPPSTSPPPPLCPPPPPPV-----------SPPPLP 442
Query: 395 CPPSPPPRRPRERSPGPV----------------DTRSPASSGKAPPRGGLTGATSPAWT 438
PP PP + +E SP PV R+ + +A P G +P+
Sbjct: 443 SPPPPPAQEEQEESPPPVVPATCSRKRGRPPLTPSQRAEREAARAGPEGTSPPTPTPSTA 502
Query: 439 RGG 441
GG
Sbjct: 503 TGG 505
>gi|27436927 synoviolin 1 isoform b [Homo sapiens]
Length = 617
Score = 40.8 bits (94), Expect = 0.003
Identities = 32/93 (34%), Positives = 42/93 (45%), Gaps = 7/93 (7%)
Query: 189 PHPATSPKATLAIFQPPGKALTGRSVGPSSALPGDPYNSAAGATDFAEISPSASSDSGEG 248
P P P+ L F PPG +GP +P P + A A + + S SG
Sbjct: 364 PQPPNFPQGLLPPF-PPGMFPLWPPMGPFPPVPPPPSSGEAVAPPSTSAA-ALSRPSGAA 421
Query: 249 TSLDAGTRST----KAGGPGAAAGPGEAGPGSG 277
T+ AGT +T A GPG+ + P EAGP G
Sbjct: 422 TTTAAGTSATAASATASGPGSGSAP-EAGPAPG 453
Score = 35.4 bits (80), Expect = 0.11
Identities = 28/83 (33%), Positives = 33/83 (39%), Gaps = 5/83 (6%)
Query: 364 PHPRPFLASPP---PALGRYFSVDGGARGGPVGPCPPSPPPRRPRERSPGPVDTRSPAS- 419
PHP P L PP L F P+GP PP PPP E P + + S
Sbjct: 357 PHPPPLLPQPPNFPQGLLPPFPPGMFPLWPPMGPFPPVPPPPSSGEAVAPPSTSAAALSR 416
Query: 420 -SGKAPPRGGLTGATSPAWTRGG 441
SG A T AT+ + T G
Sbjct: 417 PSGAATTTAAGTSATAASATASG 439
>gi|38158015 mastermind-like 3 [Homo sapiens]
Length = 1133
Score = 40.8 bits (94), Expect = 0.003
Identities = 50/249 (20%), Positives = 98/249 (39%), Gaps = 27/249 (10%)
Query: 104 EDPECQDAETERFLSTSSTGRRVSFNEAALFEQSRKTQDKGRRYTLTEGDFHHLKNARLT 163
+DP C D TS + + F++ L +Q + T+ E D L N
Sbjct: 280 DDPTCIDTS-----ETSLSNQNKLFSDINLNDQEWQELIDELANTVPEDDIQDLFNEDFE 334
Query: 164 HLHLPPLKIVTIHECDSGEASSATTPHPATSPKATLAIFQPPGKALTGRSVGPSSALPGD 223
P E + S++ P+ SP A +++ P + PSS+ G
Sbjct: 335 EKKEPEFSQPAT-ETPLSQESASVKSDPSHSPFAHVSMGSPQAR--------PSSS--GP 383
Query: 224 PYNSAAGATDFAEISPSASSDSGEGTSLDAGTRSTKAGGPGAAAGPGEAGPGSGAGTVLQ 283
P+++ + AT ++ + ++ + + + +S + P A PG+A P G G +L
Sbjct: 384 PFSTVSTATSLPSVASTPAAPNPASSPANCAVQSPQT--PNQAHTPGQAPPRPGNGYLLN 441
Query: 284 FLTRLRRHASLDGA--------SPYFKVKKWKLEPSQRAASLDTRGSPKRHHFQRQRAAS 335
+ S G SP ++K+ + QRA + + ++ Q+Q+
Sbjct: 442 -PAAVTVAGSASGPVAVPSSDMSPAEQLKQMAAQQQQRAKLMQQKQQQQQQQQQQQQQQQ 500
Query: 336 ESTEQEEGD 344
+ +Q+ +
Sbjct: 501 QQQQQQHSN 509
Score = 29.3 bits (64), Expect = 7.6
Identities = 40/158 (25%), Positives = 63/158 (39%), Gaps = 30/158 (18%)
Query: 202 FQPPGKALTGRSVGPSSALPGDPYNSAAGATDFAEISPSASSDSGEGTSLDAGTRSTKAG 261
F P A G S+ +S+L + G + +P+A S + AG
Sbjct: 4 FAAPAAAANGSSICINSSLNSSLGGAGIGVNNTPNSTPAAPSSNHPA-----------AG 52
Query: 262 GPGAAAGPGEAGPGSGAGTVLQFLT---RLR------RHASLDGASPYFKVKKWKLEPSQ 312
G G G GPG G+ V + T RLR R ++ + Y + + +LE +
Sbjct: 53 GCG-----GSGGPGGGSAAVPKHSTVVERLRQRIEGCRRHHVNCENRYQQAQVEQLELER 107
Query: 313 RAASLDTRGSPKRHHFQRQRAASEST-EQEEGDAPQED 349
R DT +R QR + + T +Q+ PQ+D
Sbjct: 108 R----DTVSLYQRTLEQRAKKSGAGTGKQQHPSKPQQD 141
>gi|33286436 gametogenetin [Homo sapiens]
Length = 652
Score = 40.8 bits (94), Expect = 0.003
Identities = 50/217 (23%), Positives = 72/217 (33%), Gaps = 18/217 (8%)
Query: 227 SAAGATDFAEISPSASSDSGEGTSLDAGTRSTKAGGPGAAAGPGEAGPGSGAGTVLQFLT 286
+A+GA +AE+ G L +R + G G G +GP S + + L
Sbjct: 278 AASGAISYAEVLKQGPLPPGAARPLGEVSRGAQEAEGGDGDGEGCSGPPSAPASQARALP 337
Query: 287 RLRRHASLDGASPYFKVKKWKLEPSQRAASLDTRGSPKRHHFQRQRAASESTEQEEGDAP 346
+ + G+ P F W P G+ R+RAA+ S P
Sbjct: 338 P-PPYTTFPGSKPKFD---WVSAPDGPERHFRFNGAGGGIGAPRRRAAALSGPWGSPPPP 393
Query: 347 QEDFIQYIARAGDAVAFPHPRPFLASPPPALGRYFSVDGGARGGPVG-------PCPPSP 399
E A P P L +PP + + R GP G P P P
Sbjct: 394 PEQI-------HSAPGPRRPAPALLAPPTFIFPAPTNGEPMRPGPPGLQELPPLPPPTPP 446
Query: 400 PPRRPRERSPGPVDTRSPASSGKAPPRGGLTGATSPA 436
P +P P P+ P + G L +PA
Sbjct: 447 PTLQPPALQPTPLPVAPPLTPGLGHKESALAPTAAPA 483
Score = 32.0 bits (71), Expect = 1.2
Identities = 25/85 (29%), Positives = 30/85 (35%), Gaps = 7/85 (8%)
Query: 364 PHPRPFLASPPPALGRYFSVDGGARGGPVGPCPP----SPPPRRPRERSPGPVDTRSPAS 419
P RP PPP R SV P PP PPP P ER P +
Sbjct: 137 PSLRPLKPPPPP---RQLSVKDTVPRAPSQFPPPLETWKPPPPLPSERQPADRRITPALA 193
Query: 420 SGKAPPRGGLTGATSPAWTRGGKQG 444
+ +PP G + T G +G
Sbjct: 194 TPASPPTESQAGPRNQGQTAGRARG 218
>gi|112734870 hypothetical protein LOC57648 [Homo sapiens]
Length = 1094
Score = 40.0 bits (92), Expect = 0.004
Identities = 65/286 (22%), Positives = 94/286 (32%), Gaps = 56/286 (19%)
Query: 162 LTHLHLPP-LKIVTIHECDSGEASSATTPHPATSPKATLAIFQPPGKALTGRSVGPSSAL 220
+ H LPP + +V + C S + + + +L F RS PSS+
Sbjct: 355 IPHAVLPPTVDVVALGRCSLRTLSRCSLHSASPASVRSLGRFSSVSSPQP-RSRHPSSS- 412
Query: 221 PGDPYNSAAGATDFAEISPSASSDSGEGTSLDAGTRSTKAGGPGAAAGPGEAGPGSGAGT 280
D ++ + + + SS G ++ T S P G G P G+
Sbjct: 413 -SDTWSHSQSSDTIVSDGSTLSSKGGSEGQPESSTASNSVVPP-PQGGSGRGSPSGGSTA 470
Query: 281 VLQFLTRLRRHASLDGASPYFKVKKWKLEPSQRAASLDTRGSPKRHHFQRQRAASESTEQ 340
+R L G S ++K K P P+R H QR + +
Sbjct: 471 EASDTLSIRSSGQLSGRS--VSLRKLKRPPPP----------PRRTHSLHQRGLAVP-DG 517
Query: 341 EEGDAPQEDFIQYIARAGDAVAFPHPRPFLASPPPALGRYFSVDGGARGGPVGPCPPSP- 399
G P+ + Q +P L PP GG+ G PCPP+P
Sbjct: 518 PLGLPPKPERKQ--------------QPQLPRPPTT--------GGSEGAGAAPCPPNPA 555
Query: 400 --------------PPRRPRERSPGPVDTRSPASSGKAPPRGGLTG 431
PPR P ER+ P S S P GL G
Sbjct: 556 NSWVPGLSPGGSRRPPRSP-ERTLSPSSGYSSQSGTPTLPPKGLAG 600
Score = 29.3 bits (64), Expect = 7.6
Identities = 17/50 (34%), Positives = 22/50 (44%), Gaps = 6/50 (12%)
Query: 391 PVGPCPPSPPPRRPRERSP------GPVDTRSPASSGKAPPRGGLTGATS 434
P P P SPPP +PR +P P P S+ A P+ T T+
Sbjct: 664 PKVPAPFSPPPSKPRSPNPAAPALAAPAVVPGPVSTTDASPQSPPTPQTT 713
Score = 28.9 bits (63), Expect = 9.9
Identities = 21/75 (28%), Positives = 29/75 (38%), Gaps = 1/75 (1%)
Query: 370 LASPPPALGRYFSVDGGARGGPVGPCP-PSPPPRRPRERSPGPVDTRSPASSGKAPPRGG 428
L PPP R S+ P GP P P R+ + + P P T +G AP
Sbjct: 494 LKRPPPPPRRTHSLHQRGLAVPDGPLGLPPKPERKQQPQLPRPPTTGGSEGAGAAPCPPN 553
Query: 429 LTGATSPAWTRGGKQ 443
+ P + GG +
Sbjct: 554 PANSWVPGLSPGGSR 568
>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
Length = 2752
Score = 40.0 bits (92), Expect = 0.004
Identities = 69/314 (21%), Positives = 107/314 (34%), Gaps = 42/314 (13%)
Query: 135 EQSRKTQDKGRRYTLTEGDFHHLKNARLTHLHLPPLKIVTIHECDSGEASSATTPHPATS 194
+ RK++DK R K +R T P K H S +++S++ + S
Sbjct: 235 KSKRKSKDKKR------------KRSRST---TPAPKSRRAHRSTSADSASSSDTSRSRS 279
Query: 195 PKATLAIFQPPGKALTGRSVGPSSALPGD---PYNSAAGATDFAEISPSASSD--SGEGT 249
A AL GRS P+S G+ P++ + SP ++ S
Sbjct: 280 RSAAAKTHTT---ALAGRSPSPASGRRGEGDAPFSEPGTTSTQRPSSPETATKQPSSPYE 336
Query: 250 SLDAGTRSTKAGGPGAAAGPGEAGPGSGAGTVLQFLTRLRRHASLDGASPYFKVKKWKLE 309
D + A P + GP A T L RH + + +
Sbjct: 337 DKDKDKKEKSATRPSPSPERSSTGPEPPAPTPLL----AERHGGSPQPLATTPLSQEPVN 392
Query: 310 PSQRAASLDTRGSPKRHHFQRQRAASESTEQEEGDAPQEDFIQYIARAGDAVAFPHPRPF 369
P A+ R PK Q ++SES+ +PQ + A + P P P
Sbjct: 393 PPSEASPTRDRSPPKSPEKLPQSSSSESSPP----SPQPTKVSRHASSSPESPKPAPAPG 448
Query: 370 ----LASPPPALGRYFSVDGGARGGPVGPCPPSPPPRRPRERSPGPVDTRSPASSGKAPP 425
++S P + R + G S P R RS P + S + P
Sbjct: 449 SHREISSSPTSKNR-------SHGRAKRDKSHSHTPSRRMGRSRSPATAKRGRSRSRTPT 501
Query: 426 RGGLTGATSPAWTR 439
+ G + + SP W R
Sbjct: 502 KRGHSRSRSPQWRR 515
Score = 37.4 bits (85), Expect = 0.028
Identities = 24/93 (25%), Positives = 39/93 (41%)
Query: 182 EASSATTPHPATSPKATLAIFQPPGKALTGRSVGPSSALPGDPYNSAAGATDFAEISPSA 241
E + P P +PK + +PP R SS+ +S++ ++ + S S+
Sbjct: 2573 EVALKRVPSPTPAPKEAVREGRPPEPTPAKRKRRSSSSSSSSSSSSSSSSSSSSSSSSSS 2632
Query: 242 SSDSGEGTSLDAGTRSTKAGGPGAAAGPGEAGP 274
SS S +S + + S PG A P A P
Sbjct: 2633 SSSSSSSSSSSSSSSSPSPAKPGPQALPKPASP 2665
Score = 36.6 bits (83), Expect = 0.048
Identities = 59/276 (21%), Positives = 93/276 (33%), Gaps = 45/276 (16%)
Query: 186 ATTPHPATSPKATLAIFQPPGKALTGRSVGPSSALPGDPYNSAAGATDFAE---ISPSAS 242
ATT A L++ P + VG A G SA A A+ S S+S
Sbjct: 2481 ATTTSSAGDHNGMLSV---PAPGVPHSDVGEPPASTGAQQPSALAALQPAKERRSSSSSS 2537
Query: 243 SDSGEGTSLDAGTRSTKAGGPGAAAGPGEAGPGSGAGTVLQFL--TRLRRHASLDGASPY 300
S S +S + + S+ + G ++ G + P + + T + A +G P
Sbjct: 2538 SSSSSSSSSSSSSSSSSSSGSSSSDSEGSSLPVQPEVALKRVPSPTPAPKEAVREGRPPE 2597
Query: 301 FKVKKWKLEPSQRAASLDTRGSPKRHHFQRQRAASESTEQEEGDAPQEDFIQYIARAGDA 360
K K S ++S + S ++S S+ +
Sbjct: 2598 PTPAKRKRRSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----------- 2646
Query: 361 VAFPHPRPFLASPPPALGRYFSVDGGARGGPVGPCPPSPPPRRPRERSP-GPVD------ 413
+SP PA G + P P PPP R RSP P+D
Sbjct: 2647 ----------SSPSPA-------KPGPQALPKPASPKKPPPGERRSRSPRKPIDSLRDSR 2689
Query: 414 --TRSPASSGKAPPRGGLTGATSPAWTRGGKQGETG 447
+ SP + P+ S + RG ++G+ G
Sbjct: 2690 SLSYSPVERRRPSPQPSPRDQQSSSSERGSRRGQRG 2725
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 40.0 bits (92), Expect = 0.004
Identities = 77/322 (23%), Positives = 114/322 (35%), Gaps = 58/322 (18%)
Query: 155 HHLKNARLTHLHLPPLKIVTIHECDSGEASSATTPHPATSPKATLAIFQPPGKALTGRSV 214
H +K LT L L P S A +P +P ATL + K++ S+
Sbjct: 688 HPVKEGTLTTLPLVPTA--------SENCPVAPSPQNTCAPLATLVLAPEIPKSVPSPSL 739
Query: 215 GPSSALPGDPYNSAAGATDFAEISPSASS-------DSG-EGTSLDAGTRSTKAGGP--- 263
P+ PG G + + ++P ASS DSG T+ GT + A P
Sbjct: 740 PPAGTPPGT--KKVDGISHTSALAPVASSPKECPTEDSGASATASSKGTLTYLADSPSPL 797
Query: 264 GAAAGP---------GEAGPGSGAGTVLQFLTRL------RRHASLDGASPYFKVKKWKL 308
G + P G AGP + G + ++ + S G+
Sbjct: 798 GVSVSPQTKRPPTKKGSAGPDTPIGNLSSPVSPVEASFLPENSLSFQGSKDSPATTHSPT 857
Query: 309 EPSQRAA---SLDTRGSPKRHHFQRQRAASEST-------EQEEGDAPQEDFIQYIARAG 358
PS + A S T SPK + + S E AP++ + +
Sbjct: 858 PPSPKGAPTPSAVTPLSPKGVTLPPKETPTPSVVNLPFPKEGPATPAPKQAPALSMTSSS 917
Query: 359 --DAVAFPHPRPFLASPPP--ALGRYFSVDGGARGGPVGPCP---PSPPPRRPRE----- 406
A A P P+ ASP P A + +GGP P P P+PP P
Sbjct: 918 PKKARATPAPKGIPASPSPKGAPTPPAATPPSPKGGPATPSPKWAPTPPAATPPSPKGGP 977
Query: 407 RSPGPVDTRSPASSGKAPPRGG 428
+P P +P ++ P+GG
Sbjct: 978 ATPSPKGAPTPPAATPPSPKGG 999
Score = 36.2 bits (82), Expect = 0.062
Identities = 80/297 (26%), Positives = 98/297 (32%), Gaps = 59/297 (19%)
Query: 180 SGEASSATTPH---PAT------SPKATLAIFQPPGKALTGRSVGPSSALPGDPYNSAAG 230
S + AT PH P T SPK LA P G T P++ P A
Sbjct: 1112 SPKGGLATPPHKGAPTTPAATPPSPKGGLATPPPKGAPTT-----PAATPPSPKGGLATP 1166
Query: 231 ATDFAEISPSASSDSGEG---TSLDAGTRSTKAGGPGAAAGPGEAGPGSGAGTVLQFLTR 287
A +P+A+ S +G T G +T A P + G G A P T
Sbjct: 1167 PPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKG-GLATPSPKGAPTTPAATP 1225
Query: 288 LRRHASLDGASPYFKVKKWKLEPSQRAASLDTRGSPKRHHFQRQRAASESTEQEEGDAPQ 347
L SP K P+ AA T SPK +T +G AP
Sbjct: 1226 PSPKGGLATPSP-------KGAPTTPAA---TPPSPK---------GGPATPPPKG-APT 1265
Query: 348 EDFIQYIARAGDAVAFPH---PRPFLASPP-PALGRYFSVDGGA-----------RGGPV 392
+ G PH P P + +PP P G S GA +G P
Sbjct: 1266 PPAATPPSLKGGLATPPHKGAPNPAVVTPPSPKGGPATSPPKGAPTPPAATPPSPKGSPG 1325
Query: 393 GPCPPSPPPRRPRERSPGPVDT-----RSPASSGKAPPRGGLTGATSPAWTRGGKQG 444
P PP P P P P T +P+S G G T PA T K G
Sbjct: 1326 TP-PPKGAPTPPAVTPPSPKGTPTLPATTPSSKGGPTTPSSKEGPTPPAATPSHKGG 1381
Score = 32.7 bits (73), Expect = 0.69
Identities = 67/290 (23%), Positives = 99/290 (34%), Gaps = 45/290 (15%)
Query: 171 KIVTIHECDSGEASSATTPHPATSPKATLAIFQPPGKALTGRSVGPSSALPGDPYNSAAG 230
K VT+ ++ S P P P AT A Q P ++T S + A P A+
Sbjct: 876 KGVTLPPKETPTPSVVNLPFPKEGP-ATPAPKQAPALSMTSSSPKKARATPAPKGIPASP 934
Query: 231 ATDFAEISPSASSDSGEGTSLDAGTRSTK-AGGPGAAAGPGEAGPGSGAGTVLQFLTRLR 289
+ A P+A+ S +G T S K A P AA P G + T
Sbjct: 935 SPKGAPTPPAATPPSPKG---GPATPSPKWAPTPPAATPPSPKGGPA---------TPSP 982
Query: 290 RHASLDGASPYFKVKKWKLEPSQRAASL-------DTRGSPKRHHFQRQRAASES-TEQE 341
+ A A+ K PS + A +GSP F + + + T
Sbjct: 983 KGAPTPPAATPPSPKGGPATPSPKGAPTPPAVTPPSPKGSPAATPFPKGASTPPAATPPS 1042
Query: 342 EGDAPQEDFIQYIARAGDAVAFPHPRPFLASPPPALGRYFSVDGGARGGPVGPCPPSPPP 401
+P + A A P P+ A+P +G P P +PP
Sbjct: 1043 PKGSPAATPLPKGAPTTPAATLPSPKGGPATP------------SLKGAPTPPAA-TPPS 1089
Query: 402 RRPRERSPGPVDTRSPASSGKAPPRGGL----------TGATSPAWTRGG 441
+ +P P P ++ P+GGL T A +P +GG
Sbjct: 1090 PKGGPATPSPKGAPMPPAATPPSPKGGLATPPHKGAPTTPAATPPSPKGG 1139
Score = 28.9 bits (63), Expect = 9.9
Identities = 35/99 (35%), Positives = 42/99 (42%), Gaps = 11/99 (11%)
Query: 168 PPLKIVTI-HECDSGEAS--SATTPHPATSPKATLAIFQPPGKALTGRSVGPSSALPGDP 224
PP + T+ + C + AS S P T+P TLAI P K T SV S PG
Sbjct: 205 PPCIVSTVPYHCVTPMASIQSGVASLPQTTPTTTLAIASPQVKDTTISSVLISPQNPGS- 263
Query: 225 YNSAAGATDFAEISPSASSDSGEGTSLDAGTRSTKAGGP 263
S G +SP A+ S SL T S K GP
Sbjct: 264 -LSLKG-----PVSPPAAL-SLSTQSLPVVTSSQKTAGP 295
>gi|23510368 homeobox D11 [Homo sapiens]
Length = 338
Score = 39.7 bits (91), Expect = 0.006
Identities = 62/253 (24%), Positives = 82/253 (32%), Gaps = 68/253 (26%)
Query: 216 PSSALPGDPYNSAAGATDFAEISPSASSDSGEGTSLDAGTRSTKAGGPGAAAGPGEAGPG 275
PSS PY+S A + A D G L+ + GG G +AG G +G G
Sbjct: 38 PSSCQMTFPYSSNL-APHVQPVREVAFRDYG----LERAKWPYRGGGGGGSAGGGSSGGG 92
Query: 276 SGAGTVLQFLTRLRRHASLDGASPYFKVKKWKLEPSQRAASLDTRGSPKRHHFQRQRAAS 335
G G G +PY+ AA+
Sbjct: 93 PGGG-----------GGGAGGYAPYYAA---------------------------AAAAA 114
Query: 336 ESTEQEEGDAPQEDFIQYIARAGDAVAFPHPRPFLASPPP------ALGRYFSVDG---- 385
+ E A Q + + R D V F P P A+P P A ++S G
Sbjct: 115 AAAAAAEEAAMQRELLPPAGRRPD-VLFKAPEPVCAAPGPPHGPAGAASNFYSAVGRNGI 173
Query: 386 ----------GARGGP-VGPCPPSPPPRRPRERSPGPVDTRSPASSGKAPPRGGLTGATS 434
A G P GP PP PP E + D R+ A G P T AT
Sbjct: 174 LPQGFDQFYEAAPGPPFAGPQPPPPPAPPQPEGAADKGDPRTGAGGGGGSP---CTKATP 230
Query: 435 PAWTRGGKQGETG 447
+ +G +G G
Sbjct: 231 GSEPKGAAEGSGG 243
>gi|122937267 lemur tyrosine kinase 3 [Homo sapiens]
Length = 1489
Score = 39.7 bits (91), Expect = 0.006
Identities = 34/105 (32%), Positives = 42/105 (40%), Gaps = 16/105 (15%)
Query: 346 PQEDFIQYIARAGDAVAFPHPRPFLASPP---PALGRYFSVDGGARGGPVGPCPPSPPPR 402
P ED A G P P A P P +G G RG P P PP PPPR
Sbjct: 732 PPEDDSSLRAERGSLADLPMAPPASAPPEFLDPLMGAAAPQYPG-RGPPPAPPPPPPPPR 790
Query: 403 RPRERSPGPVDTRSPASSGKAPPRGGLTGATSPAWTRGGKQGETG 447
P + + P + AS G +G +SP G K G++G
Sbjct: 791 APADPAASPDPPSAVASPG--------SGLSSP----GPKPGDSG 823
Score = 34.7 bits (78), Expect = 0.18
Identities = 60/246 (24%), Positives = 81/246 (32%), Gaps = 49/246 (19%)
Query: 195 PKATLAIFQPPGKALTGRSVGPSSALPGDPYNSAAGATDFAEISPSASSDSGEGTSLDAG 254
P TL F PG + A G+ AGA P + + GE D
Sbjct: 1265 PPLTLTPFPGPGPRRPPWEGADAGAAGGEA--GGAGA-------PGPAEEDGEDEDEDE- 1314
Query: 255 TRSTKAGGPGAAAGPGEAGPGSGAGTVLQFLTRLRRHASLDGASPY---FKVKKWKLEPS 311
+A PGAAAGP GPG + + A D A P K + EP
Sbjct: 1315 EEDEEAAAPGAAAGP--RGPGRARAAPVPVVVS---SADADAARPLRGLLKSPRGADEPE 1369
Query: 312 -----QRAASLDTRGSPKRHHFQRQRAASESTEQE--EGDA----------------PQE 348
++ + G + F ++ +E + Q EGD P +
Sbjct: 1370 DSELERKRKMVSFHGDVTVYLFDQETPTNELSVQAPPEGDTDPSTPPAPPTPPHPATPGD 1429
Query: 349 DFIQYIARAGDAVAFPHPRPFLASP-PPALGRYFSVDGGARGGPVGPCPPSPPPRRPRER 407
F + G + + P L P PP FSV P PP R P R
Sbjct: 1430 GFPSNDSGFGGSFEWAEDFPLLPPPGPPLCFSRFSVSPALE-------TPGPPARAPDAR 1482
Query: 408 SPGPVD 413
GPV+
Sbjct: 1483 PAGPVE 1488
Score = 29.3 bits (64), Expect = 7.6
Identities = 67/284 (23%), Positives = 93/284 (32%), Gaps = 57/284 (20%)
Query: 181 GEASSATTPHPATSPKATLAIFQPPGKALTGRSVGPSSALPGDPY----------NSAAG 230
G A + P P TS + A P ++ R+ G ++ P P A
Sbjct: 1067 GPAPTIGEPAPETSLERAPA----PSAVVSSRNGGETAPGPLGPAPKNGTLEPGTERRAP 1122
Query: 231 ATDFAEISPSASS-DSGEGTSLDAGTRSTKAGGPGAAAGPGEAGPGSGAGTVLQFLTRLR 289
T A +P A D G G GT + G GPGSG ++ R
Sbjct: 1123 ETGGAPRAPGAGRLDLGSGGRAPVGTGTAPGG-----------GPGSGVDAKAGWVDNTR 1171
Query: 290 RHASLDGASPYFKVKKWKLEPSQRAA--SLDTRGSPKRHHFQRQRAASESTEQEEGDAPQ 347
P + + +LEP+ A + G P RA ++ +GD P+
Sbjct: 1172 PQPPPPPLPPPPEAQPRRLEPAPPRARPEVAPEGEPGA---PDSRAGGDTALSGDGDPPK 1228
Query: 348 EDFIQYIARAGDAVAFPHPRPFLASPPPALGRYFSVDGGARGGPVGPCP------PSPPP 401
+ R G + PR FL PP G + + P P P P
Sbjct: 1229 PE------RKGPEM----PRLFLDLGPPQ-GNSEQIKARLSRLSLALPPLTLTPFPGPGP 1277
Query: 402 RRPRERSPGPVDTRSPASSGKAPPRGGLTGATSPAWTRGGKQGE 445
RRP A +G A G GA PA G + E
Sbjct: 1278 RRPPWEG---------ADAGAAGGEAGGAGAPGPAEEDGEDEDE 1312
>gi|209862765 RUN and SH3 domain containing 2 [Homo sapiens]
Length = 1516
Score = 39.7 bits (91), Expect = 0.006
Identities = 60/197 (30%), Positives = 72/197 (36%), Gaps = 22/197 (11%)
Query: 253 AGTRSTKAGGPGAAAGPGEAGPGSGAGTVLQFLTRLRRHASLDGASPYFKVKKWKLEPSQ 312
AG R+T G PG A PGS A + Q R R + P + K Q
Sbjct: 633 AGLRATGQGPLAQLMDPGPALPGSPANSHTQRDARARADGGGTESRPVLRYSK-----EQ 687
Query: 313 RAASLDTRGSPKRHHFQRQRA---ASESTEQEEGDAPQEDFIQYIARAGDAVAFPHPRPF 369
R +L + +HHF +Q A A S Q + Q A A P P
Sbjct: 688 RPTTLPIQPFVFQHHFPKQLAKARALHSLSQLYSLSGCSRTQQPAPLAAPAAQVSVPAPS 747
Query: 370 ---LASPPPALGRYFSVDGGAR--GGPVGPCPPSPPPRRPRERSPGPV--DTRSPASSGK 422
AS P A GR GAR G PSP RS GP T S AS+
Sbjct: 748 GEPQASTPRATGR------GARKAGSEPETSRPSPLGSYSPIRSVGPFGPSTDSSASTSC 801
Query: 423 APPRGGLTGATS-PAWT 438
+PP T S P W+
Sbjct: 802 SPPPEQPTATESLPPWS 818
>gi|55741719 RUN and SH3 domain containing 2 [Homo sapiens]
Length = 1516
Score = 39.7 bits (91), Expect = 0.006
Identities = 60/197 (30%), Positives = 72/197 (36%), Gaps = 22/197 (11%)
Query: 253 AGTRSTKAGGPGAAAGPGEAGPGSGAGTVLQFLTRLRRHASLDGASPYFKVKKWKLEPSQ 312
AG R+T G PG A PGS A + Q R R + P + K Q
Sbjct: 633 AGLRATGQGPLAQLMDPGPALPGSPANSHTQRDARARADGGGTESRPVLRYSK-----EQ 687
Query: 313 RAASLDTRGSPKRHHFQRQRA---ASESTEQEEGDAPQEDFIQYIARAGDAVAFPHPRPF 369
R +L + +HHF +Q A A S Q + Q A A P P
Sbjct: 688 RPTTLPIQPFVFQHHFPKQLAKARALHSLSQLYSLSGCSRTQQPAPLAAPAAQVSVPAPS 747
Query: 370 ---LASPPPALGRYFSVDGGAR--GGPVGPCPPSPPPRRPRERSPGPV--DTRSPASSGK 422
AS P A GR GAR G PSP RS GP T S AS+
Sbjct: 748 GEPQASTPRATGR------GARKAGSEPETSRPSPLGSYSPIRSVGPFGPSTDSSASTSC 801
Query: 423 APPRGGLTGATS-PAWT 438
+PP T S P W+
Sbjct: 802 SPPPEQPTATESLPPWS 818
>gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens]
Length = 904
Score = 39.7 bits (91), Expect = 0.006
Identities = 58/257 (22%), Positives = 84/257 (32%), Gaps = 62/257 (24%)
Query: 191 PATSPKATLAIFQPPGKALTGRSVGPSSALPGDPYNSAAGATDFAEISPSASSDSGEGTS 250
P+ PK A PP K S P + P + SPS SS +G+S
Sbjct: 606 PSPPPKRRTASPPPPPKRRASPSPPPKRRVSHSPPPKQRSSPVTKRRSPSLSSKHRKGSS 665
Query: 251 LDAGTRSTKAGGPGAAAGPGEAGPGSGAGTVLQFLTRLRRHASLDGASPYFKVKKWKLEP 310
TR ++ P +RH+ P
Sbjct: 666 PSRSTREARSPQPN------------------------KRHS-----------------P 684
Query: 311 SQRAASLDTRGSPKRHHFQRQRAASESTEQEEGDAPQEDFIQYIARAGDAVAFPHPRPF- 369
S R + T SP +R AS S ++ + +P I+ ++R P P+
Sbjct: 685 SPRPRAPQTSSSPP----PVRRGASSSPQRRQSPSPSTRPIRRVSRT------PEPKKIK 734
Query: 370 -LASPPPALGRYFSVDGGARGGPVGPCPPSPPPRRPRERSPGPVDTRSPAS--SGKAPPR 426
ASP P R S G P P P P PV ++SP++ S P +
Sbjct: 735 KAASPSPQSVRRVSSSRSVSGSPEPAAKKPPAP-------PSPVQSQSPSTNWSPAVPVK 787
Query: 427 GGLTGATSPAWTRGGKQ 443
+ SP+ R Q
Sbjct: 788 KAKSPTPSPSPPRNSDQ 804
Score = 37.4 bits (85), Expect = 0.028
Identities = 38/144 (26%), Positives = 53/144 (36%), Gaps = 14/144 (9%)
Query: 287 RLRRHASLDGASPYFKVKKWKLEPSQRAASLDTRGSPKRHHFQRQRAASESTEQEEGDAP 346
R RRH+ ASP + ++ + P R R SP +R+R+ S + P
Sbjct: 519 RRRRHSPSRSASPSPRKRQKETSPRGRR-----RRSPSPPPTRRRRSPSPAPPPRRRRTP 573
Query: 347 QEDFIQYIARAGDAVAFPHPRPFLASPPPALGRYFSVDGGARGGPVGPCPP------SPP 400
+ P PR + PP RY R P PP SPP
Sbjct: 574 TPPPRRRTPSPPPRRRSPSPRRY---SPPIQRRYSPSPPPKRRTASPPPPPKRRASPSPP 630
Query: 401 PRRPRERSPGPVDTRSPASSGKAP 424
P+R SP P SP + ++P
Sbjct: 631 PKRRVSHSPPPKQRSSPVTKRRSP 654
Score = 36.6 bits (83), Expect = 0.048
Identities = 58/254 (22%), Positives = 96/254 (37%), Gaps = 42/254 (16%)
Query: 180 SGEASSATTPHPATSPKATLAIFQPPGKALTGRSVGPSSALPGDPYNSAAGATDFAEISP 239
S +SS + P PK T + PP K R + PS++ P + + AT +
Sbjct: 360 SSSSSSRSRSPPKKPPKRTSS---PPRKT---RRLSPSASPPRRRHRPSPPATPPPKTRH 413
Query: 240 SASSDSGEGTSLDAGTRSTKAGGPGAAAGPGEAGPGSGAGTVLQFLTRLRRHASLDGASP 299
S + T +S + PG +G +T+ + + SP
Sbjct: 414 SPTPQQSNRTR-----KSRVSVSPGRTSGK---------------VTKHKGTEKRESPSP 453
Query: 300 YFKVKKWKLEPSQ-----RAASLDTRGSPKRHHFQRQRAASES--TEQEEGDAPQEDFIQ 352
K +K +L S+ + A+ D+ +++ Q Q+++S+S + E + P+
Sbjct: 454 APKPRKVELSESEEDKGGKMAAADSVQQRRQYRRQNQQSSSDSGSSSSSEDERPKRS--- 510
Query: 353 YIARAGDAVAFPHPRPFLASPPPALGRYFSVDGGARGGPVGPCPPSPPPRRPRERSPGPV 412
++ H ASP P + + G R PSPPP R R RSP P
Sbjct: 511 HVKNGEVGRRRRHSPSRSASPSPRKRQKETSPRGRRRRS-----PSPPPTR-RRRSPSPA 564
Query: 413 DTRSPASSGKAPPR 426
+ PPR
Sbjct: 565 PPPRRRRTPTPPPR 578
>gi|239758117 PREDICTED: hypothetical protein [Homo sapiens]
Length = 465
Score = 39.3 bits (90), Expect = 0.007
Identities = 43/177 (24%), Positives = 65/177 (36%), Gaps = 18/177 (10%)
Query: 265 AAAGPGEAGPGSGAGTVLQFLTRLRRHASLDGASPYFKVKKWKLEPSQRAASLDTRGSPK 324
+A G A P +G L L L +H + G P ++ ++ P+ L RG +
Sbjct: 31 SALGAQHAQPANGDADELLELPALLQHPT--GCDPCASLRDSRVTPATALLLLSHRGRAQ 88
Query: 325 RHHFQRQRAASESTEQEEGDAPQEDFIQYIARAGDAVAFPHPRPFLASPPPALGRYFSVD 384
R Q A +ST + G +E P + S P +V
Sbjct: 89 RRSIQAAAAQEQSTGR--GCLGKEP--------------PSQESWTRSDPRRCLSQDAVR 132
Query: 385 GGARGGPVGPCPPSPPPRRPRERSPGPVDTRSPASSGKAPPRGGLTGATSPAWTRGG 441
G+R P ++PR + +S GK P R G AT+ A +RGG
Sbjct: 133 SGSRVCRSRPQTRGGGGKQPRRQKAAVAGAKSRGGEGKKPQRRGQKAATAGAKSRGG 189
>gi|60460889 Myb protein P42POP [Homo sapiens]
Length = 399
Score = 39.3 bits (90), Expect = 0.007
Identities = 40/153 (26%), Positives = 53/153 (34%), Gaps = 41/153 (26%)
Query: 265 AAAGPGEAGPGSGAGTVLQFLTRLRRHASLDGASPYFKVKKWKLEPSQRAASLDTRGSPK 324
A GPG A PG+GAG A A+P + P + S D R +
Sbjct: 118 AILGPGVAAPGAGAG------------AEEPPAAPSSQPPPPSACPQRYVLSEDRREDRR 165
Query: 325 RHHFQRQRAASESTE----------------QEEGDAPQEDFIQYIARAGDAVAFPHPRP 368
+A S S E +E ++P +Q + A++ P P P
Sbjct: 166 ADTSAHSKAGSSSPEPWARPSCTPQEGGCPRPKERESPPPSALQPVQLPRLALSPPPPAP 225
Query: 369 FLASPPPALGRYFSVDGGARGGPVGPCPPSPPP 401
L PPP V P PPSPPP
Sbjct: 226 PLPPPPPL-------------AQVAPSPPSPPP 245
>gi|224458284 Rho GTPase activating protein 23 [Homo sapiens]
Length = 1397
Score = 38.9 bits (89), Expect = 0.010
Identities = 25/64 (39%), Positives = 34/64 (53%), Gaps = 5/64 (7%)
Query: 180 SGEASSATTPHPATSPKATLAIFQPPGKALTGRSV--GPSSALPGDPYNSAAGATDFAEI 237
SGEA S P P P+ T A PP +A T ++ P+SALP DP + AA + +
Sbjct: 82 SGEARSIPEPPPICYPRKTYA---PPARASTRATMVPEPTSALPSDPRSPAAWSDPGLRV 138
Query: 238 SPSA 241
P+A
Sbjct: 139 PPAA 142
>gi|40538799 ataxin-1 ubiquitin-like interacting protein [Homo
sapiens]
Length = 601
Score = 38.9 bits (89), Expect = 0.010
Identities = 27/84 (32%), Positives = 40/84 (47%), Gaps = 2/84 (2%)
Query: 201 IFQPPGKALTGRSVGPSSALPGDPYNSAAGATDFAEISPSASSDSGEGTSLDAGTRSTKA 260
+ + P KA + SS DP SA T + +P+ S SG +S DAG+ S ++
Sbjct: 81 VIKTPQKAQDPAAATASSPSTPDPA-SAPSTTPASPATPAQPSTSGSASS-DAGSGSRRS 138
Query: 261 GGPGAAAGPGEAGPGSGAGTVLQF 284
G G + G GE P + A + F
Sbjct: 139 SGGGPSPGAGEGSPSATASILSGF 162
Score = 36.6 bits (83), Expect = 0.048
Identities = 43/142 (30%), Positives = 57/142 (40%), Gaps = 44/142 (30%)
Query: 149 LTEGDF---HHLKNARLTHLHLP-PLKIVTIHECDSGEASSATTPHPATSPKATLAIFQP 204
L +GD H +K+ HL + P K + + ASS +TP PA++P T A
Sbjct: 61 LKDGDTLNQHGIKDGLTVHLVIKTPQKA---QDPAAATASSPSTPDPASAPSTTPA---- 113
Query: 205 PGKALTGRSVGPSSALPGDPYNSAAGATDFAEISPSASSDSGEGTSLDAGTRSTKAGGPG 264
S A P P S SASSD+G +G+R + GGP
Sbjct: 114 ------------SPATPAQPSTSG-----------SASSDAG------SGSRRSSGGGPS 144
Query: 265 AAAGPGE----AGPGSGAGTVL 282
AG G A SG G +L
Sbjct: 145 PGAGEGSPSATASILSGFGGIL 166
>gi|7706501 WW domain binding protein 11 [Homo sapiens]
Length = 641
Score = 38.9 bits (89), Expect = 0.010
Identities = 26/64 (40%), Positives = 27/64 (42%), Gaps = 10/64 (15%)
Query: 366 PRPFLASPPPALGRYFSVDGGARGGPVGPCPPSPPPRRPRERSPGPVDTRSPASSGKAPP 425
P P L P P GR G GP PP PPPR P R P PA G PP
Sbjct: 453 PLPRLLPPGPPPGR----PPGPPPGPPPGLPPGPPPRGPPPRLP------PPAPPGIPPP 502
Query: 426 RGGL 429
R G+
Sbjct: 503 RPGM 506
Score = 38.1 bits (87), Expect = 0.016
Identities = 32/118 (27%), Positives = 40/118 (33%), Gaps = 16/118 (13%)
Query: 324 KRHHFQRQRAASESTEQEEGDAPQEDF----IQYIARAGDAVAFPHPRPFLA-------- 371
++ H + + ST + AP + IQ G P P P L
Sbjct: 371 QKQHKEESHSDGTSTASSQQQAPPQSVPPSQIQAPPMPGPPPLGPPPAPPLRPPGPPTGL 430
Query: 372 --SPPPALGRYFSVDG--GARGGPVGPCPPSPPPRRPRERSPGPVDTRSPASSGKAPP 425
PPP + G G RG PP PPP RP PGP P + PP
Sbjct: 431 PPGPPPGAPPFLRPPGMPGLRGPLPRLLPPGPPPGRPPGPPPGPPPGLPPGPPPRGPP 488
Score = 30.0 bits (66), Expect = 4.4
Identities = 23/65 (35%), Positives = 23/65 (35%), Gaps = 14/65 (21%)
Query: 364 PHPRPFLASPPPALGRYFSVDGGARGGPVG---PCPPSPPPRRPRERSPGPVDTRSPASS 420
P P P L PP RG P P PP PP RP P V PA
Sbjct: 472 PGPPPGLPPGPPP-----------RGPPPRLPPPAPPGIPPPRPGMMRPPLVPPLGPAPP 520
Query: 421 GKAPP 425
G PP
Sbjct: 521 GLFPP 525
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.312 0.130 0.391
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,331,996
Number of Sequences: 37866
Number of extensions: 1419824
Number of successful extensions: 16030
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 199
Number of HSP's successfully gapped in prelim test: 886
Number of HSP's that attempted gapping in prelim test: 11058
Number of HSP's gapped (non-prelim): 5092
length of query: 447
length of database: 18,247,518
effective HSP length: 105
effective length of query: 342
effective length of database: 14,271,588
effective search space: 4880883096
effective search space used: 4880883096
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.