SYVN1 24325

Name: SYVN1	Sequence: fasta or formatted (617aa)		NCBI GI: 27436927
Description: synoviolin 1 isoform b		Referenced in: Ring Finger Proteins
Other entries for this name: alt prot [616aa] synoviolin 1 isoform a
Composition: Amino acid Percentage Count Longest homopolymer A alanine 11.2 69 3 C cysteine 1.5 9 1 D aspartate 2.4 15 2 E glutamate 5.3 33 2 F phenylalanine 6.2 38 2 G glycine 4.7 29 1 H histidine 2.6 16 1 I isoleucine 3.2 20 2 K lysine 2.1 13 2 L leucine 10.4 64 3 M methionine 4.7 29 2 N asparagine 1.8 11 1 P proline 12.6 78 4 Q glutamine 3.1 19 2 R arginine 5.0 31 4 S serine 6.8 42 2 T threonine 6.8 42 3 V valine 6.0 37 2 W tryptophan 1.1 7 1 Y tyrosine 2.4 15 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 synoviolin 1 isoform b SYVN1 0.995 synoviolin 1 isoform a AMFR 0.079 autocrine motility factor receptor DIAPH1 0.049 diaphanous 1 isoform 2 DIAPH1 0.049 diaphanous 1 isoform 1 SF1 0.046 splicing factor 1 isoform 2 SF1 0.046 splicing factor 1 isoform 1 PRR12 0.045 proline rich 12 FMN2 0.042 formin 2 SF3B4 0.042 splicing factor 3b, subunit 4 SFPQ 0.041 splicing factor proline/glutamine rich (polypyrimidin... TAF4 0.041 TBP-associated factor 4 RNF139 0.039 ring finger protein 139 WASL 0.038 Wiskott-Aldrich syndrome gene-like protein PRB2 0.038 proline-rich protein BstNI subfamily 2 PRB1 0.038 proline-rich protein BstNI subfamily 1 isoform 1 pre... SF3A2 0.038 splicing factor 3a, subunit 2 YLPM1 0.036 YLP motif containing 1 PTPN23 0.036 protein tyrosine phosphatase, non-receptor type 23 [... FLJ22184 0.036 PREDICTED: hypothetical protein FLJ22184 MLL4 0.036 myeloid/lymphoid or mixed-lineage leukemia 4 MAPK1IP1L 0.036 MAPK-interacting and spindle-stabilizing protein [Ho... C6orf132 0.036 PREDICTED: chromosome 6 open reading frame 132 [Hom... C6orf132 0.036 PREDICTED: chromosome 6 open reading frame 132 [Hom... C6orf132 0.036 PREDICTED: hypothetical protein LOC647024 CPSF6 0.034 cleavage and polyadenylation specific factor 6, 68 ... FLJ22184 0.034 PREDICTED: hypothetical protein FLJ22184 FLJ22184 0.034 PREDICTED: hypothetical protein LOC80164 NACA 0.034 nascent polypeptide-associated complex alpha subuni... RAPH1 0.034 Ras association and pleckstrin homology domains 1 is... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.