Guide to the Human Genome
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Name: ESPNL Sequence: fasta or formatted (1005aa) NCBI GI: 155969701
Description:

espin-like

Referenced in:

Ankyrin Family
Auditory and Vestibular Functions

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            11.5        116           4
 C cysteine            2.2         22           2
 D aspartate           4.7         47           2
 E glutamate           7.0         70           2
 F phenylalanine       2.6         26           2
 G glycine             9.7         97           2
 H histidine           4.1         41           2
 I isoleucine          2.2         22           2
 K lysine              2.0         20           1
 L leucine            12.0        121           3
 M methionine          1.2         12           1
 N asparagine          1.4         14           1
 P proline             8.6         86           5
 Q glutamine           4.5         45           2
 R arginine            7.5         75           3
 S serine              7.1         71           2
 T threonine           4.7         47           1
 V valine              4.4         44           2
 W tryptophan          1.7         17           1
 Y tyrosine            1.2         12           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   espin-like 
ESPN                  0.173   espin 
RIPK4                 0.054   ankyrin repeat domain 3 
ANK3                  0.050   ankyrin 3 isoform 1 
ANK1                  0.049   ankyrin 1 isoform 9 
ANK1                  0.049   ankyrin 1 isoform 1 
ANK1                  0.049   ankyrin 1 isoform 3 
ANK1                  0.049   ankyrin 1 isoform 2 
ANK1                  0.049   ankyrin 1 isoform 4 
ANKRD50               0.049   ankyrin repeat domain 50 
ANK2                  0.048   ankyrin 2 isoform 3 
ANK2                  0.048   ankyrin 2 isoform 2 
ANK2                  0.048   ankyrin 2 isoform 1 
ANKRD44               0.047   ankyrin repeat domain 44 
ANKK1                 0.045   ankyrin repeat and kinase domain containing 1 
ANKRD28               0.044   ankyrin repeat domain 28 
DAPK1                 0.044   death-associated protein kinase 1 
ANKRD52               0.043   ankyrin repeat domain 52 
TNKS                  0.043   tankyrase, TRF1-interacting ankyrin-related ADP-ribo...
LOC441869             0.043   hypothetical protein LOC441869 
ANKRD17               0.041   ankyrin repeat domain protein 17 isoform a 
TNKS2                 0.040   tankyrase, TRF1-interacting ankyrin-related ADP-ribo...
ANKRD17               0.039   ankyrin repeat domain protein 17 isoform b 
ANKRD42               0.039   ankyrin repeat domain 42 
ANKHD1                0.038   ankyrin repeat and KH domain containing 1 isoform 1 ...
ANKHD1-EIF4EBP3       0.038   ANKHD1-EIF4EBP3 protein 
INVS                  0.038   inversin isoform a 
INVS                  0.038   inversin isoform b 
FEM1A                 0.038   fem-1 homolog a 
ANKRD29               0.037   ankyrin repeat domain 29 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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