Guide to the Human Genome
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Name: C19orf26 Sequence: fasta or formatted (447aa) NCBI GI: 148886716
Description:

downstream of Stk11

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            11.4         51           3
 C cysteine            1.1          5           1
 D aspartate           5.1         23           1
 E glutamate           5.4         24           2
 F phenylalanine       3.4         15           1
 G glycine            10.3         46           2
 H histidine           2.7         12           2
 I isoleucine          1.6          7           1
 K lysine              3.6         16           2
 L leucine             7.4         33           3
 M methionine          0.7          3           1
 N asparagine          1.6          7           1
 P proline             9.8         44           3
 Q glutamine           3.1         14           1
 R arginine            7.4         33           2
 S serine              8.7         39           2
 T threonine          10.1         45           7
 V valine              4.3         19           3
 W tryptophan          0.9          4           1
 Y tyrosine            1.6          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   downstream of Stk11 
FLJ22184              0.021   PREDICTED: hypothetical protein FLJ22184 
FLJ22184              0.021   PREDICTED: hypothetical protein FLJ22184 
PHC2                  0.021   polyhomeotic-like 2 isoform a 
ESPNL                 0.020   espin-like 
FLJ31945              0.019   PREDICTED: hypothetical protein 
FLJ31945              0.019   PREDICTED: hypothetical protein 
SYVN1                 0.019   synoviolin 1 isoform a 
COL3A1                0.019   collagen type III alpha 1 preproprotein 
PCNXL3                0.019   pecanex-like 3 
MICALL2               0.019   MICAL-like 2 isoform 1 
LOC100291206          0.018   PREDICTED: hypothetical protein XP_002347014 
FLJ22184              0.018   PREDICTED: hypothetical protein LOC80164 
MLL4                  0.018   myeloid/lymphoid or mixed-lineage leukemia 4 
SYVN1                 0.018   synoviolin 1 isoform b 
MAML3                 0.018   mastermind-like 3 
GGN                   0.018   gametogenetin 
KIAA1522              0.017   hypothetical protein LOC57648 
SRRM2                 0.017   splicing coactivator subunit SRm300 
NACA                  0.017   nascent polypeptide-associated complex alpha subuni...
HOXD11                0.017   homeobox D11 
LMTK3                 0.017   lemur tyrosine kinase 3 
RUSC2                 0.017   RUN and SH3 domain containing 2 
RUSC2                 0.017   RUN and SH3 domain containing 2 
SRRM1                 0.017   serine/arginine repetitive matrix 1 
LOC100293129          0.016   PREDICTED: hypothetical protein 
MYPOP                 0.016   Myb protein P42POP 
ARHGAP23              0.016   Rho GTPase activating protein 23 
UBQLN4                0.016   ataxin-1 ubiquitin-like interacting protein 
WBP11                 0.016   WW domain binding protein 11 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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