Guide to the Human Genome
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Name: RUSC2 Sequence: fasta or formatted (1516aa) NCBI GI: 55741719
Description:

RUN and SH3 domain containing 2

Referenced in:

Additional Interaction Domain Families
Non-Receptor Tyrosine Kinase Pathways

Other entries for this name:
alt mRNA [1516aa] RUN and SH3 domain containing 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.5        114           4
 C cysteine            2.4         37           2
 D aspartate           3.9         59           2
 E glutamate           6.3         96           8
 F phenylalanine       2.7         41           1
 G glycine            10.4        157           5
 H histidine           2.8         43           2
 I isoleucine          1.7         26           2
 K lysine              2.8         42           3
 L leucine             9.2        140           5
 M methionine          1.2         18           1
 N asparagine          2.2         33           1
 P proline            10.6        161           3
 Q glutamine           5.8         88           3
 R arginine            6.2         94           2
 S serine             12.6        191           3
 T threonine           4.6         69           2
 V valine              4.3         65           2
 W tryptophan          1.1         17           2
 Y tyrosine            1.6         25           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   RUN and SH3 domain containing 2 
RUSC2                 1.000   RUN and SH3 domain containing 2 
RUSC1                 0.075   RUN and SH3 domain containing 1 isoform c 
RUSC1                 0.075   RUN and SH3 domain containing 1 isoform a 
RUSC1                 0.075   RUN and SH3 domain containing 1 isoform d 
RUSC1                 0.040   RUN and SH3 domain containing 1 isoform b 
FLJ22184              0.012   PREDICTED: hypothetical protein FLJ22184 
FLJ22184              0.012   PREDICTED: hypothetical protein LOC80164 
ATN1                  0.010   atrophin-1 
ATN1                  0.010   atrophin-1 
LOC100130506          0.009   PREDICTED: hypothetical protein 
LOC100288911          0.009   PREDICTED: hypothetical protein XP_002342241 
ARID1A                0.009   AT rich interactive domain 1A isoform a 
ARID1A                0.009   AT rich interactive domain 1A isoform b 
PCLO                  0.009   piccolo isoform 2 
PCLO                  0.009   piccolo isoform 1 
SRRM2                 0.009   splicing coactivator subunit SRm300 
MLL2                  0.009   myeloid/lymphoid or mixed-lineage leukemia 2 
KIAA1522              0.009   hypothetical protein LOC57648 
C7orf51               0.008   hypothetical protein FLJ37538 
FLJ22184              0.008   PREDICTED: hypothetical protein FLJ22184 
MUC12                 0.008   PREDICTED: mucin 12, cell surface associated 
MLL5                  0.008   myeloid/lymphoid or mixed-lineage leukemia 5 
MLL5                  0.008   myeloid/lymphoid or mixed-lineage leukemia 5 
ARID1B                0.008   AT rich interactive domain 1B (SWI1-like) isoform 2 ...
ARID1B                0.008   AT rich interactive domain 1B (SWI1-like) isoform 1 ...
ARID1B                0.008   AT rich interactive domain 1B (SWI1-like) isoform 3 ...
MAGEE1                0.008   melanoma antigen family E, 1 
C17orf96              0.008   hypothetical protein LOC100170841 
AATK                  0.008   apoptosis-associated tyrosine kinase 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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