Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 148747864
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|148747864 JAW1-related protein isoform a [Homo sapiens]
(903 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|148747864 JAW1-related protein isoform a [Homo sapiens] 1803 0.0
gi|154091332 JAW1-related protein isoform b [Homo sapiens] 1630 0.0
gi|148728182 JAW1-related protein isoform b [Homo sapiens] 1630 0.0
gi|154091334 JAW1-related protein isoform c [Homo sapiens] 1183 0.0
gi|42789729 lymphoid-restricted membrane protein [Homo sapiens] 133 7e-31
gi|37537692 proline-rich protein BstNI subfamily 4 precursor [Ho... 61 4e-09
gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens] 60 1e-08
gi|163965366 nascent polypeptide-associated complex alpha subuni... 56 1e-07
gi|163914392 glioma tumor suppressor candidate region gene 1 [Ho... 55 4e-07
gi|189181724 proteoglycan 4 isoform D [Homo sapiens] 54 5e-07
gi|189181722 proteoglycan 4 isoform C [Homo sapiens] 54 5e-07
gi|189181720 proteoglycan 4 isoform B [Homo sapiens] 54 5e-07
gi|67190163 proteoglycan 4 isoform A [Homo sapiens] 54 5e-07
gi|19924097 synapsin I isoform Ib [Homo sapiens] 54 5e-07
gi|41349482 proline-rich protein BstNI subfamily 1 isoform 1 pre... 54 5e-07
gi|119395760 diaphanous 1 isoform 2 [Homo sapiens] 54 9e-07
gi|119395758 diaphanous 1 isoform 1 [Homo sapiens] 54 9e-07
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 53 1e-06
gi|111118972 collagen, type XI, alpha 2 isoform 2 preproprotein ... 52 2e-06
gi|111118968 collagen, type XI, alpha 2 isoform 3 preproprotein ... 52 2e-06
gi|111118970 collagen, type XI, alpha 2 isoform 1 preproprotein ... 52 2e-06
gi|44662807 hypothetical protein LOC388407 [Homo sapiens] 52 3e-06
gi|155030232 proline, glutamic acid and leucine rich protein 1 [... 51 4e-06
gi|41349484 proline-rich protein BstNI subfamily 1 isoform 2 pre... 51 4e-06
gi|111118976 collagen, type II, alpha 1 isoform 1 precursor [Hom... 51 6e-06
gi|111118974 collagen, type II, alpha 1 isoform 2 precursor [Hom... 51 6e-06
gi|239752594 PREDICTED: hypothetical protein, partial [Homo sapi... 51 6e-06
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 50 7e-06
gi|28559039 mediator complex subunit 1 [Homo sapiens] 50 9e-06
gi|110349772 alpha 1 type I collagen preproprotein [Homo sapiens] 50 1e-05
>gi|148747864 JAW1-related protein isoform a [Homo sapiens]
Length = 903
Score = 1803 bits (4670), Expect = 0.0
Identities = 903/903 (100%), Positives = 903/903 (100%)
Query: 1 MGMDLTCPFGVSPACGAQASWSIFGADAAEVPGTRGHSQQEAAMPHIPEDEEPPGEPQAA 60
MGMDLTCPFGVSPACGAQASWSIFGADAAEVPGTRGHSQQEAAMPHIPEDEEPPGEPQAA
Sbjct: 1 MGMDLTCPFGVSPACGAQASWSIFGADAAEVPGTRGHSQQEAAMPHIPEDEEPPGEPQAA 60
Query: 61 QSPAGQGPPTAGVSCSPTPTIVLTGDATSPEGETDKNLANRVHSPHKRLSHRHLKVSTAS 120
QSPAGQGPPTAGVSCSPTPTIVLTGDATSPEGETDKNLANRVHSPHKRLSHRHLKVSTAS
Sbjct: 61 QSPAGQGPPTAGVSCSPTPTIVLTGDATSPEGETDKNLANRVHSPHKRLSHRHLKVSTAS 120
Query: 121 LTSVDPAGHIIDLVNDQLPDISISEEDKKKNLALLEEAKLVSERFLTRRGRKSRSSPGDS 180
LTSVDPAGHIIDLVNDQLPDISISEEDKKKNLALLEEAKLVSERFLTRRGRKSRSSPGDS
Sbjct: 121 LTSVDPAGHIIDLVNDQLPDISISEEDKKKNLALLEEAKLVSERFLTRRGRKSRSSPGDS 180
Query: 181 PSAVSPNLSPSASPTSSRSNSLTVPTPPGLDVCSGPPSPLPGAPPQKGDEADVSSPHPGE 240
PSAVSPNLSPSASPTSSRSNSLTVPTPPGLDVCSGPPSPLPGAPPQKGDEADVSSPHPGE
Sbjct: 181 PSAVSPNLSPSASPTSSRSNSLTVPTPPGLDVCSGPPSPLPGAPPQKGDEADVSSPHPGE 240
Query: 241 PNVPKGLADRKQNDQRKVSQGRLAPRPPPVEKSKEIAIEQKENFDPLQYPETTPKGLAPV 300
PNVPKGLADRKQNDQRKVSQGRLAPRPPPVEKSKEIAIEQKENFDPLQYPETTPKGLAPV
Sbjct: 241 PNVPKGLADRKQNDQRKVSQGRLAPRPPPVEKSKEIAIEQKENFDPLQYPETTPKGLAPV 300
Query: 301 TNSSGKMALNSPQPGPVESELGKQLLKTGWEGSPLPRSPTQDAAGVGPPASQGRGPAGEP 360
TNSSGKMALNSPQPGPVESELGKQLLKTGWEGSPLPRSPTQDAAGVGPPASQGRGPAGEP
Sbjct: 301 TNSSGKMALNSPQPGPVESELGKQLLKTGWEGSPLPRSPTQDAAGVGPPASQGRGPAGEP 360
Query: 361 MGPEAGSKAELPPTVSRPPLLRGLSWDSGPEEPGPRLQKVLAKLPLAEEEKRFAGKAGGK 420
MGPEAGSKAELPPTVSRPPLLRGLSWDSGPEEPGPRLQKVLAKLPLAEEEKRFAGKAGGK
Sbjct: 361 MGPEAGSKAELPPTVSRPPLLRGLSWDSGPEEPGPRLQKVLAKLPLAEEEKRFAGKAGGK 420
Query: 421 LAKAPGLKDFQIQVQPVRMQKLTKLREEHILMRNQNLVGLKLPDLSEAAEQEKGLPSELS 480
LAKAPGLKDFQIQVQPVRMQKLTKLREEHILMRNQNLVGLKLPDLSEAAEQEKGLPSELS
Sbjct: 421 LAKAPGLKDFQIQVQPVRMQKLTKLREEHILMRNQNLVGLKLPDLSEAAEQEKGLPSELS 480
Query: 481 PAIEEEESKSGLDVMPNISDVLLRKLRVHRSLPGSAPPLTEKEVENVFVQLSLAFRNDSY 540
PAIEEEESKSGLDVMPNISDVLLRKLRVHRSLPGSAPPLTEKEVENVFVQLSLAFRNDSY
Sbjct: 481 PAIEEEESKSGLDVMPNISDVLLRKLRVHRSLPGSAPPLTEKEVENVFVQLSLAFRNDSY 540
Query: 541 TLESRINQAERERNLTEENTEKELENFKASITSSASLWHHCEHRETYQKLLEDIAVLHRL 600
TLESRINQAERERNLTEENTEKELENFKASITSSASLWHHCEHRETYQKLLEDIAVLHRL
Sbjct: 541 TLESRINQAERERNLTEENTEKELENFKASITSSASLWHHCEHRETYQKLLEDIAVLHRL 600
Query: 601 AARLSSRAEVVGAVRQEKRMSKATEVMMQYVENLKRTYEKDHAELMEFKKLANQNSSRSC 660
AARLSSRAEVVGAVRQEKRMSKATEVMMQYVENLKRTYEKDHAELMEFKKLANQNSSRSC
Sbjct: 601 AARLSSRAEVVGAVRQEKRMSKATEVMMQYVENLKRTYEKDHAELMEFKKLANQNSSRSC 660
Query: 661 GPSEDGVPRTARSMSLTLGKNMPRRRVSVAVVPKFNALNLPGQTPSSSSIPSLPALSESP 720
GPSEDGVPRTARSMSLTLGKNMPRRRVSVAVVPKFNALNLPGQTPSSSSIPSLPALSESP
Sbjct: 661 GPSEDGVPRTARSMSLTLGKNMPRRRVSVAVVPKFNALNLPGQTPSSSSIPSLPALSESP 720
Query: 721 NGKGSLPVTSALPALLENGKTNGDPDCEASAPALTLSCLEELSQETKARMEEEAYSKGFQ 780
NGKGSLPVTSALPALLENGKTNGDPDCEASAPALTLSCLEELSQETKARMEEEAYSKGFQ
Sbjct: 721 NGKGSLPVTSALPALLENGKTNGDPDCEASAPALTLSCLEELSQETKARMEEEAYSKGFQ 780
Query: 781 EGLKKTKELQDLKEEEEEQKSESPEEPEEVEETEEEEKGPRSSKLEELVHFLQVMYPKLC 840
EGLKKTKELQDLKEEEEEQKSESPEEPEEVEETEEEEKGPRSSKLEELVHFLQVMYPKLC
Sbjct: 781 EGLKKTKELQDLKEEEEEQKSESPEEPEEVEETEEEEKGPRSSKLEELVHFLQVMYPKLC 840
Query: 841 QHWQVIWMMAAVMLVLTVVLGLYNSYNSCAEQADGPLGRSTCSAAQRDSWWSSGLQHEQP 900
QHWQVIWMMAAVMLVLTVVLGLYNSYNSCAEQADGPLGRSTCSAAQRDSWWSSGLQHEQP
Sbjct: 841 QHWQVIWMMAAVMLVLTVVLGLYNSYNSCAEQADGPLGRSTCSAAQRDSWWSSGLQHEQP 900
Query: 901 TEQ 903
TEQ
Sbjct: 901 TEQ 903
>gi|154091332 JAW1-related protein isoform b [Homo sapiens]
Length = 821
Score = 1630 bits (4220), Expect = 0.0
Identities = 820/821 (99%), Positives = 821/821 (100%)
Query: 83 LTGDATSPEGETDKNLANRVHSPHKRLSHRHLKVSTASLTSVDPAGHIIDLVNDQLPDIS 142
+TGDATSPEGETDKNLANRVHSPHKRLSHRHLKVSTASLTSVDPAGHIIDLVNDQLPDIS
Sbjct: 1 MTGDATSPEGETDKNLANRVHSPHKRLSHRHLKVSTASLTSVDPAGHIIDLVNDQLPDIS 60
Query: 143 ISEEDKKKNLALLEEAKLVSERFLTRRGRKSRSSPGDSPSAVSPNLSPSASPTSSRSNSL 202
ISEEDKKKNLALLEEAKLVSERFLTRRGRKSRSSPGDSPSAVSPNLSPSASPTSSRSNSL
Sbjct: 61 ISEEDKKKNLALLEEAKLVSERFLTRRGRKSRSSPGDSPSAVSPNLSPSASPTSSRSNSL 120
Query: 203 TVPTPPGLDVCSGPPSPLPGAPPQKGDEADVSSPHPGEPNVPKGLADRKQNDQRKVSQGR 262
TVPTPPGLDVCSGPPSPLPGAPPQKGDEADVSSPHPGEPNVPKGLADRKQNDQRKVSQGR
Sbjct: 121 TVPTPPGLDVCSGPPSPLPGAPPQKGDEADVSSPHPGEPNVPKGLADRKQNDQRKVSQGR 180
Query: 263 LAPRPPPVEKSKEIAIEQKENFDPLQYPETTPKGLAPVTNSSGKMALNSPQPGPVESELG 322
LAPRPPPVEKSKEIAIEQKENFDPLQYPETTPKGLAPVTNSSGKMALNSPQPGPVESELG
Sbjct: 181 LAPRPPPVEKSKEIAIEQKENFDPLQYPETTPKGLAPVTNSSGKMALNSPQPGPVESELG 240
Query: 323 KQLLKTGWEGSPLPRSPTQDAAGVGPPASQGRGPAGEPMGPEAGSKAELPPTVSRPPLLR 382
KQLLKTGWEGSPLPRSPTQDAAGVGPPASQGRGPAGEPMGPEAGSKAELPPTVSRPPLLR
Sbjct: 241 KQLLKTGWEGSPLPRSPTQDAAGVGPPASQGRGPAGEPMGPEAGSKAELPPTVSRPPLLR 300
Query: 383 GLSWDSGPEEPGPRLQKVLAKLPLAEEEKRFAGKAGGKLAKAPGLKDFQIQVQPVRMQKL 442
GLSWDSGPEEPGPRLQKVLAKLPLAEEEKRFAGKAGGKLAKAPGLKDFQIQVQPVRMQKL
Sbjct: 301 GLSWDSGPEEPGPRLQKVLAKLPLAEEEKRFAGKAGGKLAKAPGLKDFQIQVQPVRMQKL 360
Query: 443 TKLREEHILMRNQNLVGLKLPDLSEAAEQEKGLPSELSPAIEEEESKSGLDVMPNISDVL 502
TKLREEHILMRNQNLVGLKLPDLSEAAEQEKGLPSELSPAIEEEESKSGLDVMPNISDVL
Sbjct: 361 TKLREEHILMRNQNLVGLKLPDLSEAAEQEKGLPSELSPAIEEEESKSGLDVMPNISDVL 420
Query: 503 LRKLRVHRSLPGSAPPLTEKEVENVFVQLSLAFRNDSYTLESRINQAERERNLTEENTEK 562
LRKLRVHRSLPGSAPPLTEKEVENVFVQLSLAFRNDSYTLESRINQAERERNLTEENTEK
Sbjct: 421 LRKLRVHRSLPGSAPPLTEKEVENVFVQLSLAFRNDSYTLESRINQAERERNLTEENTEK 480
Query: 563 ELENFKASITSSASLWHHCEHRETYQKLLEDIAVLHRLAARLSSRAEVVGAVRQEKRMSK 622
ELENFKASITSSASLWHHCEHRETYQKLLEDIAVLHRLAARLSSRAEVVGAVRQEKRMSK
Sbjct: 481 ELENFKASITSSASLWHHCEHRETYQKLLEDIAVLHRLAARLSSRAEVVGAVRQEKRMSK 540
Query: 623 ATEVMMQYVENLKRTYEKDHAELMEFKKLANQNSSRSCGPSEDGVPRTARSMSLTLGKNM 682
ATEVMMQYVENLKRTYEKDHAELMEFKKLANQNSSRSCGPSEDGVPRTARSMSLTLGKNM
Sbjct: 541 ATEVMMQYVENLKRTYEKDHAELMEFKKLANQNSSRSCGPSEDGVPRTARSMSLTLGKNM 600
Query: 683 PRRRVSVAVVPKFNALNLPGQTPSSSSIPSLPALSESPNGKGSLPVTSALPALLENGKTN 742
PRRRVSVAVVPKFNALNLPGQTPSSSSIPSLPALSESPNGKGSLPVTSALPALLENGKTN
Sbjct: 601 PRRRVSVAVVPKFNALNLPGQTPSSSSIPSLPALSESPNGKGSLPVTSALPALLENGKTN 660
Query: 743 GDPDCEASAPALTLSCLEELSQETKARMEEEAYSKGFQEGLKKTKELQDLKEEEEEQKSE 802
GDPDCEASAPALTLSCLEELSQETKARMEEEAYSKGFQEGLKKTKELQDLKEEEEEQKSE
Sbjct: 661 GDPDCEASAPALTLSCLEELSQETKARMEEEAYSKGFQEGLKKTKELQDLKEEEEEQKSE 720
Query: 803 SPEEPEEVEETEEEEKGPRSSKLEELVHFLQVMYPKLCQHWQVIWMMAAVMLVLTVVLGL 862
SPEEPEEVEETEEEEKGPRSSKLEELVHFLQVMYPKLCQHWQVIWMMAAVMLVLTVVLGL
Sbjct: 721 SPEEPEEVEETEEEEKGPRSSKLEELVHFLQVMYPKLCQHWQVIWMMAAVMLVLTVVLGL 780
Query: 863 YNSYNSCAEQADGPLGRSTCSAAQRDSWWSSGLQHEQPTEQ 903
YNSYNSCAEQADGPLGRSTCSAAQRDSWWSSGLQHEQPTEQ
Sbjct: 781 YNSYNSCAEQADGPLGRSTCSAAQRDSWWSSGLQHEQPTEQ 821
>gi|148728182 JAW1-related protein isoform b [Homo sapiens]
Length = 821
Score = 1630 bits (4220), Expect = 0.0
Identities = 820/821 (99%), Positives = 821/821 (100%)
Query: 83 LTGDATSPEGETDKNLANRVHSPHKRLSHRHLKVSTASLTSVDPAGHIIDLVNDQLPDIS 142
+TGDATSPEGETDKNLANRVHSPHKRLSHRHLKVSTASLTSVDPAGHIIDLVNDQLPDIS
Sbjct: 1 MTGDATSPEGETDKNLANRVHSPHKRLSHRHLKVSTASLTSVDPAGHIIDLVNDQLPDIS 60
Query: 143 ISEEDKKKNLALLEEAKLVSERFLTRRGRKSRSSPGDSPSAVSPNLSPSASPTSSRSNSL 202
ISEEDKKKNLALLEEAKLVSERFLTRRGRKSRSSPGDSPSAVSPNLSPSASPTSSRSNSL
Sbjct: 61 ISEEDKKKNLALLEEAKLVSERFLTRRGRKSRSSPGDSPSAVSPNLSPSASPTSSRSNSL 120
Query: 203 TVPTPPGLDVCSGPPSPLPGAPPQKGDEADVSSPHPGEPNVPKGLADRKQNDQRKVSQGR 262
TVPTPPGLDVCSGPPSPLPGAPPQKGDEADVSSPHPGEPNVPKGLADRKQNDQRKVSQGR
Sbjct: 121 TVPTPPGLDVCSGPPSPLPGAPPQKGDEADVSSPHPGEPNVPKGLADRKQNDQRKVSQGR 180
Query: 263 LAPRPPPVEKSKEIAIEQKENFDPLQYPETTPKGLAPVTNSSGKMALNSPQPGPVESELG 322
LAPRPPPVEKSKEIAIEQKENFDPLQYPETTPKGLAPVTNSSGKMALNSPQPGPVESELG
Sbjct: 181 LAPRPPPVEKSKEIAIEQKENFDPLQYPETTPKGLAPVTNSSGKMALNSPQPGPVESELG 240
Query: 323 KQLLKTGWEGSPLPRSPTQDAAGVGPPASQGRGPAGEPMGPEAGSKAELPPTVSRPPLLR 382
KQLLKTGWEGSPLPRSPTQDAAGVGPPASQGRGPAGEPMGPEAGSKAELPPTVSRPPLLR
Sbjct: 241 KQLLKTGWEGSPLPRSPTQDAAGVGPPASQGRGPAGEPMGPEAGSKAELPPTVSRPPLLR 300
Query: 383 GLSWDSGPEEPGPRLQKVLAKLPLAEEEKRFAGKAGGKLAKAPGLKDFQIQVQPVRMQKL 442
GLSWDSGPEEPGPRLQKVLAKLPLAEEEKRFAGKAGGKLAKAPGLKDFQIQVQPVRMQKL
Sbjct: 301 GLSWDSGPEEPGPRLQKVLAKLPLAEEEKRFAGKAGGKLAKAPGLKDFQIQVQPVRMQKL 360
Query: 443 TKLREEHILMRNQNLVGLKLPDLSEAAEQEKGLPSELSPAIEEEESKSGLDVMPNISDVL 502
TKLREEHILMRNQNLVGLKLPDLSEAAEQEKGLPSELSPAIEEEESKSGLDVMPNISDVL
Sbjct: 361 TKLREEHILMRNQNLVGLKLPDLSEAAEQEKGLPSELSPAIEEEESKSGLDVMPNISDVL 420
Query: 503 LRKLRVHRSLPGSAPPLTEKEVENVFVQLSLAFRNDSYTLESRINQAERERNLTEENTEK 562
LRKLRVHRSLPGSAPPLTEKEVENVFVQLSLAFRNDSYTLESRINQAERERNLTEENTEK
Sbjct: 421 LRKLRVHRSLPGSAPPLTEKEVENVFVQLSLAFRNDSYTLESRINQAERERNLTEENTEK 480
Query: 563 ELENFKASITSSASLWHHCEHRETYQKLLEDIAVLHRLAARLSSRAEVVGAVRQEKRMSK 622
ELENFKASITSSASLWHHCEHRETYQKLLEDIAVLHRLAARLSSRAEVVGAVRQEKRMSK
Sbjct: 481 ELENFKASITSSASLWHHCEHRETYQKLLEDIAVLHRLAARLSSRAEVVGAVRQEKRMSK 540
Query: 623 ATEVMMQYVENLKRTYEKDHAELMEFKKLANQNSSRSCGPSEDGVPRTARSMSLTLGKNM 682
ATEVMMQYVENLKRTYEKDHAELMEFKKLANQNSSRSCGPSEDGVPRTARSMSLTLGKNM
Sbjct: 541 ATEVMMQYVENLKRTYEKDHAELMEFKKLANQNSSRSCGPSEDGVPRTARSMSLTLGKNM 600
Query: 683 PRRRVSVAVVPKFNALNLPGQTPSSSSIPSLPALSESPNGKGSLPVTSALPALLENGKTN 742
PRRRVSVAVVPKFNALNLPGQTPSSSSIPSLPALSESPNGKGSLPVTSALPALLENGKTN
Sbjct: 601 PRRRVSVAVVPKFNALNLPGQTPSSSSIPSLPALSESPNGKGSLPVTSALPALLENGKTN 660
Query: 743 GDPDCEASAPALTLSCLEELSQETKARMEEEAYSKGFQEGLKKTKELQDLKEEEEEQKSE 802
GDPDCEASAPALTLSCLEELSQETKARMEEEAYSKGFQEGLKKTKELQDLKEEEEEQKSE
Sbjct: 661 GDPDCEASAPALTLSCLEELSQETKARMEEEAYSKGFQEGLKKTKELQDLKEEEEEQKSE 720
Query: 803 SPEEPEEVEETEEEEKGPRSSKLEELVHFLQVMYPKLCQHWQVIWMMAAVMLVLTVVLGL 862
SPEEPEEVEETEEEEKGPRSSKLEELVHFLQVMYPKLCQHWQVIWMMAAVMLVLTVVLGL
Sbjct: 721 SPEEPEEVEETEEEEKGPRSSKLEELVHFLQVMYPKLCQHWQVIWMMAAVMLVLTVVLGL 780
Query: 863 YNSYNSCAEQADGPLGRSTCSAAQRDSWWSSGLQHEQPTEQ 903
YNSYNSCAEQADGPLGRSTCSAAQRDSWWSSGLQHEQPTEQ
Sbjct: 781 YNSYNSCAEQADGPLGRSTCSAAQRDSWWSSGLQHEQPTEQ 821
>gi|154091334 JAW1-related protein isoform c [Homo sapiens]
Length = 597
Score = 1183 bits (3061), Expect = 0.0
Identities = 597/597 (100%), Positives = 597/597 (100%)
Query: 307 MALNSPQPGPVESELGKQLLKTGWEGSPLPRSPTQDAAGVGPPASQGRGPAGEPMGPEAG 366
MALNSPQPGPVESELGKQLLKTGWEGSPLPRSPTQDAAGVGPPASQGRGPAGEPMGPEAG
Sbjct: 1 MALNSPQPGPVESELGKQLLKTGWEGSPLPRSPTQDAAGVGPPASQGRGPAGEPMGPEAG 60
Query: 367 SKAELPPTVSRPPLLRGLSWDSGPEEPGPRLQKVLAKLPLAEEEKRFAGKAGGKLAKAPG 426
SKAELPPTVSRPPLLRGLSWDSGPEEPGPRLQKVLAKLPLAEEEKRFAGKAGGKLAKAPG
Sbjct: 61 SKAELPPTVSRPPLLRGLSWDSGPEEPGPRLQKVLAKLPLAEEEKRFAGKAGGKLAKAPG 120
Query: 427 LKDFQIQVQPVRMQKLTKLREEHILMRNQNLVGLKLPDLSEAAEQEKGLPSELSPAIEEE 486
LKDFQIQVQPVRMQKLTKLREEHILMRNQNLVGLKLPDLSEAAEQEKGLPSELSPAIEEE
Sbjct: 121 LKDFQIQVQPVRMQKLTKLREEHILMRNQNLVGLKLPDLSEAAEQEKGLPSELSPAIEEE 180
Query: 487 ESKSGLDVMPNISDVLLRKLRVHRSLPGSAPPLTEKEVENVFVQLSLAFRNDSYTLESRI 546
ESKSGLDVMPNISDVLLRKLRVHRSLPGSAPPLTEKEVENVFVQLSLAFRNDSYTLESRI
Sbjct: 181 ESKSGLDVMPNISDVLLRKLRVHRSLPGSAPPLTEKEVENVFVQLSLAFRNDSYTLESRI 240
Query: 547 NQAERERNLTEENTEKELENFKASITSSASLWHHCEHRETYQKLLEDIAVLHRLAARLSS 606
NQAERERNLTEENTEKELENFKASITSSASLWHHCEHRETYQKLLEDIAVLHRLAARLSS
Sbjct: 241 NQAERERNLTEENTEKELENFKASITSSASLWHHCEHRETYQKLLEDIAVLHRLAARLSS 300
Query: 607 RAEVVGAVRQEKRMSKATEVMMQYVENLKRTYEKDHAELMEFKKLANQNSSRSCGPSEDG 666
RAEVVGAVRQEKRMSKATEVMMQYVENLKRTYEKDHAELMEFKKLANQNSSRSCGPSEDG
Sbjct: 301 RAEVVGAVRQEKRMSKATEVMMQYVENLKRTYEKDHAELMEFKKLANQNSSRSCGPSEDG 360
Query: 667 VPRTARSMSLTLGKNMPRRRVSVAVVPKFNALNLPGQTPSSSSIPSLPALSESPNGKGSL 726
VPRTARSMSLTLGKNMPRRRVSVAVVPKFNALNLPGQTPSSSSIPSLPALSESPNGKGSL
Sbjct: 361 VPRTARSMSLTLGKNMPRRRVSVAVVPKFNALNLPGQTPSSSSIPSLPALSESPNGKGSL 420
Query: 727 PVTSALPALLENGKTNGDPDCEASAPALTLSCLEELSQETKARMEEEAYSKGFQEGLKKT 786
PVTSALPALLENGKTNGDPDCEASAPALTLSCLEELSQETKARMEEEAYSKGFQEGLKKT
Sbjct: 421 PVTSALPALLENGKTNGDPDCEASAPALTLSCLEELSQETKARMEEEAYSKGFQEGLKKT 480
Query: 787 KELQDLKEEEEEQKSESPEEPEEVEETEEEEKGPRSSKLEELVHFLQVMYPKLCQHWQVI 846
KELQDLKEEEEEQKSESPEEPEEVEETEEEEKGPRSSKLEELVHFLQVMYPKLCQHWQVI
Sbjct: 481 KELQDLKEEEEEQKSESPEEPEEVEETEEEEKGPRSSKLEELVHFLQVMYPKLCQHWQVI 540
Query: 847 WMMAAVMLVLTVVLGLYNSYNSCAEQADGPLGRSTCSAAQRDSWWSSGLQHEQPTEQ 903
WMMAAVMLVLTVVLGLYNSYNSCAEQADGPLGRSTCSAAQRDSWWSSGLQHEQPTEQ
Sbjct: 541 WMMAAVMLVLTVVLGLYNSYNSCAEQADGPLGRSTCSAAQRDSWWSSGLQHEQPTEQ 597
>gi|42789729 lymphoid-restricted membrane protein [Homo sapiens]
Length = 499
Score = 133 bits (335), Expect = 7e-31
Identities = 89/215 (41%), Positives = 128/215 (59%), Gaps = 12/215 (5%)
Query: 485 EEESKSGLDVMPNISDVLLRKLRVHRSLPGSAPPLTEKEVENVFVQLSLAFRNDSYTLES 544
++E SG V+ + ++ + + +S SA EKEVE F++LSL F+ D +TLE
Sbjct: 118 KKEHASGDSVVSPLPVTTVKSVNLRQSENTSA---NEKEVEAEFLRLSLGFKCDWFTLEK 174
Query: 545 RINQAERERNLTEENTEKELENFKASITSSASLWHHCEH----RETYQKLLEDIAVLHRL 600
R+ ER R+L EEN +KE+ N + S L CE +E +KL + I L +
Sbjct: 175 RVKLEERSRDLAEENLKKEITNCLKLLESLTPL---CEDDNQAQEIIKKLEKSIKFLSQC 231
Query: 601 AARLSSRAEVVGAVRQEKRMSKATEVMMQYVENLKRTYEKDHAELMEFKKLANQNSSRSC 660
AAR++SRAE++GA+ QE R+SKA EVM+Q+VENLKR Y K+HAEL E K++ QN RS
Sbjct: 232 AARVASRAEMLGAINQESRVSKAVEVMIQHVENLKRMYAKEHAELEELKQVLLQN-ERSF 290
Query: 661 GPSEDGVPRTARSMSLTL-GKNMPRRRVSVAVVPK 694
P ED + S +L K RRV++A +P+
Sbjct: 291 NPLEDDDDCQIKKRSASLNSKPSSLRRVTIASLPR 325
>gi|37537692 proline-rich protein BstNI subfamily 4 precursor [Homo
sapiens]
Length = 247
Score = 61.2 bits (147), Expect = 4e-09
Identities = 54/191 (28%), Positives = 73/191 (38%), Gaps = 29/191 (15%)
Query: 205 PTPPGLDVCSGPPSPL---PGAPPQKGDEADVSSPHPGEPNVP--------KGLADRKQN 253
P P G + GPP P G PPQ G+++ PHPG+P P +G
Sbjct: 60 PPPQGGNQSQGPPPPPGKPEGRPPQGGNQSQGPPPHPGKPERPPPQGGNQSQGTPPPPGK 119
Query: 254 DQRKVSQG---RLAPRPPPVEKSKEIAIEQKENFDPLQYPETTPKGLAPVTNSSGKMALN 310
+R QG P PPP + + ++ P +P P+G P + + A +
Sbjct: 120 PERPPPQGGNQSHRPPPPPGKPERPPPQGGNQSQGPPPHP-GKPEGPPPQEGNKSRSARS 178
Query: 311 SP--QPGPVESELGKQLLKTGWEGSPLPRSPTQDAAGVGPPASQGRGPAGEPMGPEAGSK 368
P GP + E K +G P P P G P PAG+P GP
Sbjct: 179 PPGKPQGPPQQEGNKP------QGPPPPGKPQGPPPAGGNPQQPQAPPAGKPQGPPP--- 229
Query: 369 AELPPTVSRPP 379
PP RPP
Sbjct: 230 ---PPQGGRPP 237
Score = 44.7 bits (104), Expect = 4e-04
Identities = 45/171 (26%), Positives = 59/171 (34%), Gaps = 28/171 (16%)
Query: 216 PPSPLPGAPPQKGDEADVSSPHPGEPNVPKGLADRKQNDQRKVSQGRLAPRPPPVEKSKE 275
PP G PPQ G+++ P PG+P + R G + PPP E
Sbjct: 53 PPGKPQGPPPQGGNQSQGPPPPPGKP------------EGRPPQGGNQSQGPPPHPGKPE 100
Query: 276 IAIEQKENFDPLQYPETTPKGLAPVTNSSGKMALNSPQPGPVESELGKQLLKTGWEGSPL 335
Q N P P G G + P P P GK G+
Sbjct: 101 RPPPQGGNQSQGTPP---PPGKPERPPPQGGNQSHRPPPPP-----GKPERPPPQGGNQS 152
Query: 336 PRSPTQDAAGVGPPASQG------RGPAGEPMGP--EAGSKAELPPTVSRP 378
P GPP +G R P G+P GP + G+K + PP +P
Sbjct: 153 QGPPPHPGKPEGPPPQEGNKSRSARSPPGKPQGPPQQEGNKPQGPPPPGKP 203
>gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens]
Length = 416
Score = 59.7 bits (143), Expect = 1e-08
Identities = 65/234 (27%), Positives = 84/234 (35%), Gaps = 23/234 (9%)
Query: 177 PGDSPSAVSPNLSPSASPTSSRSNSLTVPTPPGLDVCSGPPSP--LPGAPPQKGDEADVS 234
P P P S SP S P P G + GPP P P PP +G
Sbjct: 94 PPGKPQGPPPQGDKSRSPRSPPGKPQG-PPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQG 152
Query: 235 SPHPGEPNVPKGLADRKQNDQRKVS--------QGRLAPR-PPPVEKSKEIAIEQKENFD 285
P PG+P P D K R QG P+ PPP + Q N
Sbjct: 153 PPPPGKPQGPPPQGDNKSRSSRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKP 212
Query: 286 PLQYPETTPKGLAPVTNSSGKMALNSP-QPGPVESELGKQLLKTGWEGSPLPRSPTQDAA 344
P P+G P ++ + A + P +P + G Q +G P P Q
Sbjct: 213 QGPPPPGKPQGPPPQGDNKSQSARSPPGKPQGPPPQGGNQP-----QGPPPPPGKPQGPP 267
Query: 345 GVGPPASQGRGPAGEPMG--PEAGSK---AELPPTVSRPPLLRGLSWDSGPEEP 393
G QG P G+P G P+ GSK + PP + P +G + GP P
Sbjct: 268 PQGGNKPQGPPPPGKPQGPPPQGGSKSRSSRSPPGKPQGPPPQGGNQPQGPPPP 321
Score = 57.4 bits (137), Expect = 6e-08
Identities = 71/275 (25%), Positives = 97/275 (35%), Gaps = 33/275 (12%)
Query: 178 GDSPSAVSPNLSPSASPTSSRSNSLTVPTPPGL---------DVCSGPPSP--LPGAPPQ 226
G+ P P P P + S + +PPG + GPP P P PP
Sbjct: 147 GNKPQGPPPPGKPQGPPPQGDNKSRSSRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPP 206
Query: 227 KGDEADVSSPHPGEPNVPKGLADRKQNDQRKVS--------QGRLAPR-PPPVEKSKEIA 277
+G P PG+P P D K R QG P+ PPP +
Sbjct: 207 QGGNKPQGPPPPGKPQGPPPQGDNKSQSARSPPGKPQGPPPQGGNQPQGPPPPPGKPQGP 266
Query: 278 IEQKENFDPLQYPETTPKGLAPVTNSSGKMALNSP-QPGPVESELGKQLLKTGWEGSPLP 336
Q N P P+G P S + + + P +P + G Q +G P P
Sbjct: 267 PPQGGNKPQGPPPPGKPQGPPPQGGSKSRSSRSPPGKPQGPPPQGGNQP-----QGPPPP 321
Query: 337 RSPTQDAAGVGPPASQGRGPAGEPMG--PEAGSK---AELPPTVSR-PPLLRGLSWDSGP 390
Q G QG P G+P G P+ GSK A PP + PP G + P
Sbjct: 322 PGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGGSKSRSARSPPGKPQGPPQQEGNNPQGPP 381
Query: 391 EEPGPRLQKVLAKLPLAEEEKRFAGKAGGKLAKAP 425
G Q+ A P + + GG+ ++ P
Sbjct: 382 PPAGGNPQQPQAP-PAGQPQGPPRPPQGGRPSRPP 415
Score = 52.8 bits (125), Expect = 1e-06
Identities = 59/229 (25%), Positives = 86/229 (37%), Gaps = 38/229 (16%)
Query: 180 SPSAVSPNLSPSASPTSSRSNSLTVPTPPGLDVCSGPPSPL---PGAPPQKGDEADVSSP 236
S ++ ++S SP+ N P P G + GPPSP G PPQ G++ P
Sbjct: 15 SAQNLNEDVSQEESPSLIAGNPQGAP-PQGGNKPQGPPSPPGKPQGPPPQGGNQPQGPPP 73
Query: 237 HPGEPNVPKGLADRKQNDQRKVSQGRLAPRPPPVEKSKEIAIEQKENFDPLQYPETTPKG 296
PG+P P QG P+ PP + Q + + P P+G
Sbjct: 74 PPGKPQGPP-------------PQGGNKPQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQG 120
Query: 297 LAPVTNSSGKMALNSPQPGPVESELGKQLLKTGWEGSPLPRSPTQDAAGVGPP------A 350
P G P P P + + +G P+ P GPP +
Sbjct: 121 PPP----QGGNQPQGPPPPPGKPQGPPP------QGGNKPQGPPPPGKPQGPPPQGDNKS 170
Query: 351 SQGRGPAGEPMG--PEAGSKAE-LPPTVSRP--PLLRGLSWDSGPEEPG 394
R P G+P G P+ G++ + PP +P P +G + GP PG
Sbjct: 171 RSSRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPG 219
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 56.2 bits (134), Expect = 1e-07
Identities = 93/415 (22%), Positives = 127/415 (30%), Gaps = 37/415 (8%)
Query: 48 PEDEEPPGEPQAAQSPAGQGPPTAGVSCSPTPTIVLTGDATSPE---GETDKNLANRVHS 104
P PP + +P +G PT P+P T AT+P G T +
Sbjct: 1312 PPAATPPSPKGSPGTPPPKGAPTPPAVTPPSPKGTPTLPATTPSSKGGPTTPSSKEGPTP 1371
Query: 105 PHKRLSHRHLKVSTASLTSVDPAGHIIDLVNDQLPDISISEEDKKKNLALLEEAKLVSER 164
P SH+ T PA I + D + K
Sbjct: 1372 PAATPSHKGGPAMTPPSPKRGPA-------------IPSPKGDPTSPAVIPLSPKKAPAT 1418
Query: 165 FLTRRGRKSRSSPGDSPSAVSPNLSPSASPTSSRSNSLTVPTPPGLDVCSGPPSPLPGAP 224
+TR G + S +P AV+P A TS+ P+ G P P P
Sbjct: 1419 PVTREGAATPSKGDLTPPAVTPVSLKKAPATSAPKGGPATPSSKGDPTLPAVTPPSPKEP 1478
Query: 225 PQKGDEADVSSPHP--------GEPNVPKGLADRKQNDQRKVSQGR--LAPRPPPVEKSK 274
P A SSP G P +P + + S R +AP + K
Sbjct: 1479 PAPKQVATSSSPKKAPATPAPMGAPTLPAVIPSSPKEVPATPSSRRDPIAPTATLLSKKT 1538
Query: 275 EIAIEQKENFDPLQYPETTPKGLAPVTNSSGKMALNSPQPGPVESELGKQLLKTGWEGSP 334
+ KE P +PK + A P E+ + + ++G+P
Sbjct: 1539 PATLAPKEALIPPAMTVPSPKKTPAIPTPKEAPA----TPSSKEASSPPAVTPSTYKGAP 1594
Query: 335 LPRSPTQDAAGVGP-PASQGRGPAGEPMGPEAGSKAELPPTVSRPPLLRGLSWDSGPEEP 393
P+ A P P PA P PE G P P + S P P
Sbjct: 1595 SPKELLIPPAVTSPSPKEAPTPPAVTPPSPEKGPATPAPKGTPTSPPVTPSSLKDSPTSP 1654
Query: 394 GPRLQKVLAKLPLAEEEKRFAGKAGGKLAK----APGLKDFQIQVQPVRMQKLTK 444
K+ A +P A K K G K AP + I P R TK
Sbjct: 1655 ASVTCKMGATVPQA--SKGLPAKKGPTALKEVLVAPAPESTPIITAPTRKGPQTK 1707
Score = 50.1 bits (118), Expect = 9e-06
Identities = 61/241 (25%), Positives = 87/241 (36%), Gaps = 49/241 (20%)
Query: 179 DSPSAVSPNLSPSASPTSSRSNSLTVPTPPGLDVCSGPPSPLPGA--PPQ----KGDEAD 232
DSPS + ++SP ++ S TP G S P SP+ + P +G +
Sbjct: 792 DSPSPLGVSVSPQTKRPPTKKGSAGPDTPIGN--LSSPVSPVEASFLPENSLSFQGSKDS 849
Query: 233 VSSPHPGEPNVPKGLADRKQNDQRKVSQGRLAPRPPPVE--KSKEIAIEQKENFDP---- 286
++ H P PKG AP P V K + + KE P
Sbjct: 850 PATTHSPTPPSPKG-----------------APTPSAVTPLSPKGVTLPPKETPTPSVVN 892
Query: 287 LQYPETTPKGLAP-------VTNSSGKMALNSPQPGPVESELGKQLLKTGWEGSPLPRSP 339
L +P+ P AP +T+SS K A +P P + + + G+P P +
Sbjct: 893 LPFPKEGPATPAPKQAPALSMTSSSPKKARATPAPKGIPASPSPK-------GAPTPPAA 945
Query: 340 TQDAAGVGP----PASQGRGPAGEPMGPEAGSKAELPPTVSRPPLLRGLSWDSGPEEPGP 395
T + GP P PA P P+ G P PP S GP P P
Sbjct: 946 TPPSPKGGPATPSPKWAPTPPAATPPSPKGGPATPSPKGAPTPPAATPPSPKGGPATPSP 1005
Query: 396 R 396
+
Sbjct: 1006 K 1006
Score = 45.1 bits (105), Expect = 3e-04
Identities = 54/235 (22%), Positives = 74/235 (31%), Gaps = 28/235 (11%)
Query: 174 RSSPGDSPSAVSPNLSPSASPTSSRSNSLTVPTPPGLDVCSGPPSPLPGAPPQKGDEADV 233
+ SP +P + P+A+P S + + P P G P P P
Sbjct: 1020 KGSPAATPFPKGASTPPAATPPSPKGSPAATPLPKGAPTTPAATLPSPKGGPATPSLKGA 1079
Query: 234 SSPHPGEPNVPKGLADRKQNDQRKVSQGRLAPRPP---PVEKSKEIAIEQKENFDPLQYP 290
+P P PKG + AP PP P +A P +
Sbjct: 1080 PTPPAATPPSPKG--------GPATPSPKGAPMPPAATPPSPKGGLAT------PPHKGA 1125
Query: 291 ETTPKGLAPVTNSSGKMALNSPQPGPVESELGKQLLKTGWEGSPLPRSPTQDAA------ 344
TTP P + G +A P+ P K G P +PT AA
Sbjct: 1126 PTTPAATPP--SPKGGLATPPPKGAPTTPAATPPSPKGGLATPPPKGAPTTPAATPPSPK 1183
Query: 345 -GVGPPASQG--RGPAGEPMGPEAGSKAELPPTVSRPPLLRGLSWDSGPEEPGPR 396
G+ P+ +G PA P P+ G P P S G P P+
Sbjct: 1184 GGLATPSPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGLATPSPK 1238
Score = 43.9 bits (102), Expect = 7e-04
Identities = 100/407 (24%), Positives = 131/407 (32%), Gaps = 79/407 (19%)
Query: 16 GAQASWSIFGAD---AAEVPGTRGHSQQEAAM-PHIPEDEEPPGEPQAAQSPAGQGPPTA 71
G A+ S+ GA AA P +G + +P PP +P +G PT
Sbjct: 1069 GGPATPSLKGAPTPPAATPPSPKGGPATPSPKGAPMPPAATPPSPKGGLATPPHKGAPTT 1128
Query: 72 GVSCSPTPTIVLTGDATSPEGETDKNLANRVHSPHKRLSHRHLK--VSTASLTSVDPAGH 129
+ P+P G AT P A SP L+ K +T + T P G
Sbjct: 1129 PAATPPSPK---GGLATPPPKGAPTTPAATPPSPKGGLATPPPKGAPTTPAATPPSPKGG 1185
Query: 130 IIDLVNDQLPDISISEEDKKKNLALLEEAKLVSERFLTRRGRKSRSSPGDSPSAVSPNLS 189
+ P + K G + SP +P+ +
Sbjct: 1186 LATPSPKGAPTTPAATPPSPK-------------------GGLATPSPKGAPT------T 1220
Query: 190 PSASPTSSRSNSLTVPTPPGLDV--CSGPPSPL--PGAPPQKGDEAD------------V 233
P+A+P S + L P+P G + PPSP P PP KG
Sbjct: 1221 PAATPPSPK-GGLATPSPKGAPTTPAATPPSPKGGPATPPPKGAPTPPAATPPSLKGGLA 1279
Query: 234 SSPHPGEPNVPKGLADRKQNDQRKVSQGRLAPRPPPVEKSKEIAIEQKENFDPLQYPETT 293
+ PH G PN P + S + AP PP P P T
Sbjct: 1280 TPPHKGAPN-PAVVTPPSPKGGPATSPPKGAPTPPAATPP-----------SPKGSPGTP 1327
Query: 294 PKGLAP----VTNSSGKMALNSPQPGPVESELGKQLLKTGWEGSPLPRSPTQDAAGVGPP 349
P AP VT S K P P S G + EG PT AA P
Sbjct: 1328 PPKGAPTPPAVTPPSPKGTPTLPATTP--SSKGGPTTPSSKEG------PTPPAA---TP 1376
Query: 350 ASQGRGPAGEPMGPEAGSKAELPPTVSRPPLLRGLSWDSGPEEPGPR 396
+ +G GPA P P+ G P P + LS P P R
Sbjct: 1377 SHKG-GPAMTPPSPKRGPAIPSPKGDPTSPAVIPLSPKKAPATPVTR 1422
Score = 42.0 bits (97), Expect = 0.003
Identities = 93/388 (23%), Positives = 126/388 (32%), Gaps = 67/388 (17%)
Query: 51 EEPPGEPQAAQSPAGQGPPTAGVSCSPTPTIVLTGDATSP-EGETDKNLANRVHSPHKRL 109
E P P + PAG P T V + T L A+SP E T+ + A+ S L
Sbjct: 729 EIPKSVPSPSLPPAGTPPGTKKVD-GISHTSALAPVASSPKECPTEDSGASATASSKGTL 787
Query: 110 SH-----RHLKVSTASLTSVDPAGHIIDLVNDQLPDISISEEDKKKNLALLEEAKLVSER 164
++ L VS + T P PD I + EA + E
Sbjct: 788 TYLADSPSPLGVSVSPQTKRPPTKK-----GSAGPDTPIGNLSSPVSPV---EASFLPEN 839
Query: 165 FLTRRGRKSRSSPGDSPSAVSPNLSPSAS---PTSSRSNSL---TVPTP----------- 207
L+ +G K + SP+ SP +P+ S P S + +L PTP
Sbjct: 840 SLSFQGSKDSPATTHSPTPPSPKGAPTPSAVTPLSPKGVTLPPKETPTPSVVNLPFPKEG 899
Query: 208 ---------PGLDVCSGPPSPLPGAPPQKGDEADVSSPHPGEPNVPKGLADRKQNDQRKV 258
P L + S P P KG A SP P P
Sbjct: 900 PATPAPKQAPALSMTSSSPKKARATPAPKGIPA---SPSPKGAPTPPAATPPSPKGGPAT 956
Query: 259 SQGRLAPRPPPVEKSKEIAIEQKENFDPLQYPET-TPKG-----LAPVTNSSGKMALNSP 312
+ AP PP P P T +PKG A + G A SP
Sbjct: 957 PSPKWAPTPPAATPP-----------SPKGGPATPSPKGAPTPPAATPPSPKGGPATPSP 1005
Query: 313 QPGPVESELGKQLLKTGWEGSPLPRSPTQDAAGVGPPASQGRGPAGEPM--GPEAGSKAE 370
+ P + K +P P+ + A PP+ +G PA P+ G A
Sbjct: 1006 KGAPTPPAVTPPSPKGSPAATPFPKGASTPPAAT-PPSPKG-SPAATPLPKGAPTTPAAT 1063
Query: 371 LPPTVSRP--PLLRGLSWDSGPEEPGPR 396
LP P P L+G P P+
Sbjct: 1064 LPSPKGGPATPSLKGAPTPPAATPPSPK 1091
>gi|163914392 glioma tumor suppressor candidate region gene 1 [Homo
sapiens]
Length = 1560
Score = 54.7 bits (130), Expect = 4e-07
Identities = 97/401 (24%), Positives = 133/401 (33%), Gaps = 59/401 (14%)
Query: 27 DAAEVPGTRGHSQQEAA--MPHIPEDEEPPGE----PQAAQSPAGQGPPTAGVSCSPTPT 80
D P T + EAA + P + PP P Q P Q PP A PTP
Sbjct: 600 DGLVQPATPAAATGEAAPVLTVQPAPQAPPAVSTPLPLGLQQPQAQQPPQA-----PTPQ 654
Query: 81 IVLTGDATSPEGETDKNLANRVHSPHKRLSHRHLKVSTASLTSVDPAGHIIDLVNDQLPD 140
AT+P+ P L+ K+ S P L D L
Sbjct: 655 AAAPPQATTPQ-------------PSPGLASSPEKIVLGQPPSATPTAI---LTQDSL-Q 697
Query: 141 ISISEEDKKKNLALLEEAKLVSERFLTRRGRKSRSSPGDSPSAVSPNLSPSASPTSSRSN 200
+ + +E ++ L+ V + ++ +P A L P A S+++
Sbjct: 698 MFLPQERSQQPLSAEGPHLSVPASVIVSAPPPAQDPAPATPVAKGAGLGPQAP--DSQAS 755
Query: 201 SLTVPTPPGLDVCSGP-PSPLPGAPPQK--GDEADVSSPHPGEPNVPKGLADRKQNDQRK 257
P P GP PS P P Q GD + SPHP P P R Q+ R
Sbjct: 756 PAPAPQIPAAAPLKGPGPSSSPSLPHQAPLGDSPHLPSPHPTRP--PSRPPSRPQSVSRP 813
Query: 258 VSQGRLAPRPPPVEKSKEIAIEQKENFDPLQYPETTPKGLAPVTNSSGKMALNSPQPGPV 317
S+ L P PPP I +N + P + P AP + P GP+
Sbjct: 814 PSEPPLHPCPPPQAPPTLPGIFVIQNQLGVPPPASNPAPTAPGPPQPPLRPQSQPPEGPL 873
Query: 318 ESELGKQLLKTGWEGSPLPRSPTQDAAGVGPPASQGRGPAGEPMGPEAGSKAELPP---- 373
LP S T A S R PA P + + + PP
Sbjct: 874 P------------PAPHLPPSSTSSAVASSSETS-SRLPAPTP----SDFQLQFPPSQGP 916
Query: 374 --TVSRPPLLRGLSWDSGPEEPGPR-LQKVLAKLPLAEEEK 411
+ + PP L + + P P PR Q V P + K
Sbjct: 917 HKSPTPPPTLHLVPEPAAPPPPPPRTFQMVTTPFPALPQPK 957
Score = 42.0 bits (97), Expect = 0.003
Identities = 103/460 (22%), Positives = 154/460 (33%), Gaps = 103/460 (22%)
Query: 48 PEDEEPPGEP--QAAQSPAGQGP-PTAGVSCSP-----------TPTIVLTGDATS---P 90
P+ ++PP P QAA P P P+ G++ SP TPT +LT D+ P
Sbjct: 642 PQAQQPPQAPTPQAAAPPQATTPQPSPGLASSPEKIVLGQPPSATPTAILTQDSLQMFLP 701
Query: 91 EGETDKNLANRVHSPHKRLSHRHLKVSTASLTSVDPAGHIIDL----VNDQLPDISISEE 146
+ + + L+ PH LS + +A + DPA + Q PD S
Sbjct: 702 QERSQQPLS--AEGPH--LSVPASVIVSAPPPAQDPAPATPVAKGAGLGPQAPDSQASPA 757
Query: 147 DKKKNLALLEEAKLVSERFLTRRGRKSRSSPGDSPSAVSPNLSPSASPTSSRSNSLT--- 203
+ A A L + ++ GDSP SP+ + S SR S++
Sbjct: 758 PAPQIPAA---APLKGPGPSSSPSLPHQAPLGDSPHLPSPHPTRPPSRPPSRPQSVSRPP 814
Query: 204 -------------VPTPPGLDVCSG------------PPSPLPGAPPQKGDEADVSSPHP 238
PT PG+ V P +P P PP + P P
Sbjct: 815 SEPPLHPCPPPQAPPTLPGIFVIQNQLGVPPPASNPAPTAPGPPQPPLRPQSQPPEGPLP 874
Query: 239 GEPNVPKGLADRKQNDQRKVSQGRLAPRPPPVEKSKEIAIEQKENFDPLQYPETTPKGLA 298
P++P + S AP P + F P Q P +P
Sbjct: 875 PAPHLPPSSTSSAVASSSETSSRLPAPTPSDFQL----------QFPPSQGPHKSPTP-P 923
Query: 299 PVTNSSGKMALNSPQPGPVESELGKQLLKTGWEGSPLPRS--------PT----QDAAGV 346
P + + A +P P P + Q++ T + P P++ P+ Q+ AG
Sbjct: 924 PTLHLVPEPA--APPPPPPRT---FQMVTTPFPALPQPKALLERFHQVPSGIILQNKAGG 978
Query: 347 GPPASQ------------------GRGPAGEPMGPEAGSKAELPPTVSRPPLLRGLSWDS 388
P A Q G+ P+G P P PPLL +
Sbjct: 979 APAAPQTSTSLGPLTSPAASVLVSGQAPSGTPTAPSHAPAPAPMAATGLPPLLPAENKAF 1038
Query: 389 GPEEPGPRLQKVLAKLPLAEEEKRFAGKAGGKLAKAPGLK 428
P + K + P ++ K G L K P L+
Sbjct: 1039 ASNLPTLNVAKAASSGPGKPSGLQYESKLSG-LKKPPTLQ 1077
Score = 33.5 bits (75), Expect = 0.92
Identities = 45/184 (24%), Positives = 59/184 (32%), Gaps = 54/184 (29%)
Query: 205 PTPPGLDVCSGPPSPLPGAPPQKGDEADVSSPHPGEPNVPKGLADRKQNDQRKVSQGRLA 264
P P L V PP P P PP V P P P +++ +
Sbjct: 1335 PPPATLKVAEPPPRPPPPPPPTGQMNGTVDHPPPAAP------------ERKPLGTAPHC 1382
Query: 265 PRPPPVEKSKEIAIEQKENFDPLQYPETTPKGLAPVTNSSGKMALNSPQPGP-------- 316
PR P + +EN PE TP +G+ SP P P
Sbjct: 1383 PRLP-------LRKTYRENVGGPGAPEGTP---------AGRARGGSPAPLPAKVDEATS 1426
Query: 317 --------VESELGKQLLKTGWEGSPLPRSPTQDAAGVGPPASQGRGPAGEPMGPEAGSK 368
VE EL +++LK P P A G G P + G + P K
Sbjct: 1427 GLIRELAAVEDELYQRMLK-----GPPPEPAASAAQGTGDPDWEAPG-----LPPAKRRK 1476
Query: 369 AELP 372
+E P
Sbjct: 1477 SESP 1480
Score = 30.8 bits (68), Expect = 5.9
Identities = 68/252 (26%), Positives = 86/252 (34%), Gaps = 38/252 (15%)
Query: 178 GDSPSAVSPNLSPSASPTSSRSNSLTVPTPPGLDVCSGPPSPLPGAPPQKGDEADVSSPH 237
G SPS S S S +SS S++ + LD P P PP K EA
Sbjct: 1254 GGSPSVTWARASSSLSSSSSSSSAAS-----SLDADEDGPMPSRNRPPIKTYEARSRIGL 1308
Query: 238 PGEPNVPKGLADRKQNDQRKVSQGRLAP--RPPPVEKSKEIAIEQKENFDPLQYPETTPK 295
+ GL+ + V L P +PPP + ++A +P P P
Sbjct: 1309 KLKIKQEAGLS-------KVVHNTALDPVHQPPPPPATLKVA-------EPPPRPPPPP- 1353
Query: 296 GLAPVTNSSGKMALNSPQPGPVESELGKQLLKTGWEGSPLPRSPTQDAAGVGPPASQGRG 355
P T + P P LG T LP T GP A +G
Sbjct: 1354 ---PPTGQMNGTVDHPPPAAPERKPLG-----TAPHCPRLPLRKTYRENVGGPGAPEGT- 1404
Query: 356 PAGEPMGPEAGSKAELPPTVSRPPLLRGLSWDSGPEEPGPRLQKVLAKLPLAEEEKRFAG 415
PAG G GS A LP V GL + E L + + K P E A
Sbjct: 1405 PAGRARG---GSPAPLPAKVDE--ATSGLIRELAAVE--DELYQRMLKGPPPEPAASAAQ 1457
Query: 416 KAGGKLAKAPGL 427
G +APGL
Sbjct: 1458 GTGDPDWEAPGL 1469
>gi|189181724 proteoglycan 4 isoform D [Homo sapiens]
Length = 1270
Score = 54.3 bits (129), Expect = 5e-07
Identities = 59/244 (24%), Positives = 87/244 (35%), Gaps = 33/244 (13%)
Query: 180 SPSAVSPNLSPSASPTSSRSNSLTVPTPPGLDVCSGPPSPLPGAP--PQKGDEADVSSPH 237
+P A +PN +PT+ + + T P P P +P AP P+ + P
Sbjct: 534 TPKAAAPNTPKEPAPTTPKEPAPTTPKEP------APTTPKETAPTTPKGTAPTTLKEPA 587
Query: 238 PGEPN--VPKGLADRKQNDQRKVSQGRLAPRPPPVEKSKEIAIEQKENFDPLQYPETTPK 295
P P PK LA + + + AP P + + ++ P + TTPK
Sbjct: 588 PTTPKKPAPKELAPTTTKEPTSTTCDKPAPTTP--KGTAPTTPKEPAPTTPKEPAPTTPK 645
Query: 296 GLAPVTNSSGKMALNSPQPGPVESELGKQLLKTGWEG-------SPLPRSPTQDAAGV-- 346
G AP T L P P + K+L T +G P P +P + A
Sbjct: 646 GTAPTT-------LKEPAPTTPKKPAPKELAPTTTKGPTSTTSDKPAPTTPKETAPTTPK 698
Query: 347 --GPPASQGRGPAGEPMGPEAGSKAELPPTVSRPPLLRGLSWDSGPE---EPGPRLQKVL 401
P + P P S+ P T P + +S PE EP P+ +
Sbjct: 699 EPAPTTPKKPAPTTPETPPPTTSEVSTPTTTKEPTTIHKSPDESTPELSAEPTPKALENS 758
Query: 402 AKLP 405
K P
Sbjct: 759 PKEP 762
Score = 47.4 bits (111), Expect = 6e-05
Identities = 55/227 (24%), Positives = 84/227 (37%), Gaps = 26/227 (11%)
Query: 167 TRRGRKSRSSPGDSPSAVSPNLSPSASPTSSRSNSLT-----VPTPPGLDVCSGPPSPLP 221
T+ + P + + +P SPT+++ + T PT P + P P P
Sbjct: 393 TKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAP 452
Query: 222 GAP----PQKGDEADVSSPHPGEPNVPKGLADRKQNDQRKVSQGRLAPRPPPVEKSKEIA 277
P P + ++P P PK A + +LAP P EK
Sbjct: 453 TTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPKKLTPTTPEKLAPTTP--EKPAPTT 510
Query: 278 IEQKENFDPLQYPETTPKGLAPVTNSSGKMALNSP-QPGPVESELGKQLLKTGWEGSPLP 336
E+ P + TTP+ AP T + A N+P +P P K+ T P P
Sbjct: 511 PEELAPTTPEEPTPTTPEEPAPTTPKAA--APNTPKEPAPTTP---KEPAPT-TPKEPAP 564
Query: 337 RSPTQDAAGVGPPASQGRGPA----GEPMGPEAGSKAELPPTVSRPP 379
+P + A P +G P P P+ + EL PT ++ P
Sbjct: 565 TTPKETA----PTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEP 607
Score = 43.9 bits (102), Expect = 7e-04
Identities = 52/228 (22%), Positives = 75/228 (32%), Gaps = 32/228 (14%)
Query: 177 PGDSPSAVSPNLSPSASPTSSRSNSLTVPTPPGLDVCSGPPSPLPGAPPQKGDEADVSSP 236
P + + +P +PT+ + + T P P P P P E ++P
Sbjct: 286 PAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPKEPAPTTKEPAPTTP 345
Query: 237 HPGEPNVPKGLADRKQNDQRKVSQGRLAPRPPPVEKSKEIAIEQKENFDPLQYPETTPKG 296
P PK A P+ P KE A + P TTPK
Sbjct: 346 KEPAPTAPKKPAP-------------TTPKEPAPTTPKEPAPTTTKEPSP-----TTPKE 387
Query: 297 LAPVTNSSGKMALNSPQPGPVES--ELGKQLLKTGWEGSPLPRSPTQDAAGVGPPASQGR 354
AP T S P P +S K+ T + P P +P + A P + +
Sbjct: 388 PAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTK-EPAPTTPKEPA-----PTTPKK 441
Query: 355 GPAGEPMGPEAGSKAELPPTVSRPPLLRGLSWDSGPEEPGPRLQKVLA 402
P P + E PT ++ P + P+EP P K A
Sbjct: 442 PAPTTPKEPAPTTPKEPAPTTTKKPA------PTTPKEPAPTTPKETA 483
Score = 40.4 bits (93), Expect = 0.007
Identities = 52/221 (23%), Positives = 70/221 (31%), Gaps = 22/221 (9%)
Query: 181 PSAVSPNLSPSASPTSSRSNSLTVPTPPGLDVCSGPPSPLPGAPPQKGDEADVSSPHPGE 240
P++ +P +PT+ +S T P S P +P AP P P
Sbjct: 224 PASTTPK---EPTPTTIKSAPTTPKEPAPTTTKSAPTTPKEPAP------TTTKEPAPTT 274
Query: 241 PNVPKGLADRKQNDQRKVSQGRLAPRPPPVEKSKEIAIEQKE--NFDPLQYPETTPKGLA 298
P P ++ S P P K KE P + TTPK A
Sbjct: 275 PKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPKEPA 334
Query: 299 PVTNSSGKMALNSPQPGPVESELGKQLLKTGWEGSPLPRSPTQDAAGVGPPASQGRGPAG 358
P T P P + K T E P P +P + A P ++ P
Sbjct: 335 PTTKEPAPTTPKEPAPTAPK----KPAPTTPKE--PAPTTPKEPA----PTTTKEPSPT- 383
Query: 359 EPMGPEAGSKAELPPTVSRPPLLRGLSWDSGPEEPGPRLQK 399
P P + P T P S + P+EP P K
Sbjct: 384 TPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTK 424
>gi|189181722 proteoglycan 4 isoform C [Homo sapiens]
Length = 1311
Score = 54.3 bits (129), Expect = 5e-07
Identities = 59/244 (24%), Positives = 87/244 (35%), Gaps = 33/244 (13%)
Query: 180 SPSAVSPNLSPSASPTSSRSNSLTVPTPPGLDVCSGPPSPLPGAP--PQKGDEADVSSPH 237
+P A +PN +PT+ + + T P P P +P AP P+ + P
Sbjct: 575 TPKAAAPNTPKEPAPTTPKEPAPTTPKEP------APTTPKETAPTTPKGTAPTTLKEPA 628
Query: 238 PGEPN--VPKGLADRKQNDQRKVSQGRLAPRPPPVEKSKEIAIEQKENFDPLQYPETTPK 295
P P PK LA + + + AP P + + ++ P + TTPK
Sbjct: 629 PTTPKKPAPKELAPTTTKEPTSTTCDKPAPTTP--KGTAPTTPKEPAPTTPKEPAPTTPK 686
Query: 296 GLAPVTNSSGKMALNSPQPGPVESELGKQLLKTGWEG-------SPLPRSPTQDAAGV-- 346
G AP T L P P + K+L T +G P P +P + A
Sbjct: 687 GTAPTT-------LKEPAPTTPKKPAPKELAPTTTKGPTSTTSDKPAPTTPKETAPTTPK 739
Query: 347 --GPPASQGRGPAGEPMGPEAGSKAELPPTVSRPPLLRGLSWDSGPE---EPGPRLQKVL 401
P + P P S+ P T P + +S PE EP P+ +
Sbjct: 740 EPAPTTPKKPAPTTPETPPPTTSEVSTPTTTKEPTTIHKSPDESTPELSAEPTPKALENS 799
Query: 402 AKLP 405
K P
Sbjct: 800 PKEP 803
Score = 47.4 bits (111), Expect = 6e-05
Identities = 55/227 (24%), Positives = 84/227 (37%), Gaps = 26/227 (11%)
Query: 167 TRRGRKSRSSPGDSPSAVSPNLSPSASPTSSRSNSLT-----VPTPPGLDVCSGPPSPLP 221
T+ + P + + +P SPT+++ + T PT P + P P P
Sbjct: 434 TKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAP 493
Query: 222 GAP----PQKGDEADVSSPHPGEPNVPKGLADRKQNDQRKVSQGRLAPRPPPVEKSKEIA 277
P P + ++P P PK A + +LAP P EK
Sbjct: 494 TTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPKKLTPTTPEKLAPTTP--EKPAPTT 551
Query: 278 IEQKENFDPLQYPETTPKGLAPVTNSSGKMALNSP-QPGPVESELGKQLLKTGWEGSPLP 336
E+ P + TTP+ AP T + A N+P +P P K+ T P P
Sbjct: 552 PEELAPTTPEEPTPTTPEEPAPTTPKAA--APNTPKEPAPTTP---KEPAPT-TPKEPAP 605
Query: 337 RSPTQDAAGVGPPASQGRGPA----GEPMGPEAGSKAELPPTVSRPP 379
+P + A P +G P P P+ + EL PT ++ P
Sbjct: 606 TTPKETA----PTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEP 648
Score = 43.9 bits (102), Expect = 7e-04
Identities = 52/228 (22%), Positives = 75/228 (32%), Gaps = 32/228 (14%)
Query: 177 PGDSPSAVSPNLSPSASPTSSRSNSLTVPTPPGLDVCSGPPSPLPGAPPQKGDEADVSSP 236
P + + +P +PT+ + + T P P P P P E ++P
Sbjct: 327 PAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPKEPAPTTKEPAPTTP 386
Query: 237 HPGEPNVPKGLADRKQNDQRKVSQGRLAPRPPPVEKSKEIAIEQKENFDPLQYPETTPKG 296
P PK A P+ P KE A + P TTPK
Sbjct: 387 KEPAPTAPKKPAP-------------TTPKEPAPTTPKEPAPTTTKEPSP-----TTPKE 428
Query: 297 LAPVTNSSGKMALNSPQPGPVES--ELGKQLLKTGWEGSPLPRSPTQDAAGVGPPASQGR 354
AP T S P P +S K+ T + P P +P + A P + +
Sbjct: 429 PAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTK-EPAPTTPKEPA-----PTTPKK 482
Query: 355 GPAGEPMGPEAGSKAELPPTVSRPPLLRGLSWDSGPEEPGPRLQKVLA 402
P P + E PT ++ P + P+EP P K A
Sbjct: 483 PAPTTPKEPAPTTPKEPAPTTTKKPA------PTTPKEPAPTTPKETA 524
Score = 40.4 bits (93), Expect = 0.007
Identities = 52/221 (23%), Positives = 70/221 (31%), Gaps = 22/221 (9%)
Query: 181 PSAVSPNLSPSASPTSSRSNSLTVPTPPGLDVCSGPPSPLPGAPPQKGDEADVSSPHPGE 240
P++ +P +PT+ +S T P S P +P AP P P
Sbjct: 265 PASTTPK---EPTPTTIKSAPTTPKEPAPTTTKSAPTTPKEPAP------TTTKEPAPTT 315
Query: 241 PNVPKGLADRKQNDQRKVSQGRLAPRPPPVEKSKEIAIEQKE--NFDPLQYPETTPKGLA 298
P P ++ S P P K KE P + TTPK A
Sbjct: 316 PKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPKEPA 375
Query: 299 PVTNSSGKMALNSPQPGPVESELGKQLLKTGWEGSPLPRSPTQDAAGVGPPASQGRGPAG 358
P T P P + K T E P P +P + A P ++ P
Sbjct: 376 PTTKEPAPTTPKEPAPTAPK----KPAPTTPKE--PAPTTPKEPA----PTTTKEPSPT- 424
Query: 359 EPMGPEAGSKAELPPTVSRPPLLRGLSWDSGPEEPGPRLQK 399
P P + P T P S + P+EP P K
Sbjct: 425 TPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTK 465
>gi|189181720 proteoglycan 4 isoform B [Homo sapiens]
Length = 1363
Score = 54.3 bits (129), Expect = 5e-07
Identities = 59/244 (24%), Positives = 87/244 (35%), Gaps = 33/244 (13%)
Query: 180 SPSAVSPNLSPSASPTSSRSNSLTVPTPPGLDVCSGPPSPLPGAP--PQKGDEADVSSPH 237
+P A +PN +PT+ + + T P P P +P AP P+ + P
Sbjct: 627 TPKAAAPNTPKEPAPTTPKEPAPTTPKEP------APTTPKETAPTTPKGTAPTTLKEPA 680
Query: 238 PGEPN--VPKGLADRKQNDQRKVSQGRLAPRPPPVEKSKEIAIEQKENFDPLQYPETTPK 295
P P PK LA + + + AP P + + ++ P + TTPK
Sbjct: 681 PTTPKKPAPKELAPTTTKEPTSTTCDKPAPTTP--KGTAPTTPKEPAPTTPKEPAPTTPK 738
Query: 296 GLAPVTNSSGKMALNSPQPGPVESELGKQLLKTGWEG-------SPLPRSPTQDAAGV-- 346
G AP T L P P + K+L T +G P P +P + A
Sbjct: 739 GTAPTT-------LKEPAPTTPKKPAPKELAPTTTKGPTSTTSDKPAPTTPKETAPTTPK 791
Query: 347 --GPPASQGRGPAGEPMGPEAGSKAELPPTVSRPPLLRGLSWDSGPE---EPGPRLQKVL 401
P + P P S+ P T P + +S PE EP P+ +
Sbjct: 792 EPAPTTPKKPAPTTPETPPPTTSEVSTPTTTKEPTTIHKSPDESTPELSAEPTPKALENS 851
Query: 402 AKLP 405
K P
Sbjct: 852 PKEP 855
Score = 47.4 bits (111), Expect = 6e-05
Identities = 55/227 (24%), Positives = 84/227 (37%), Gaps = 26/227 (11%)
Query: 167 TRRGRKSRSSPGDSPSAVSPNLSPSASPTSSRSNSLT-----VPTPPGLDVCSGPPSPLP 221
T+ + P + + +P SPT+++ + T PT P + P P P
Sbjct: 486 TKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAP 545
Query: 222 GAP----PQKGDEADVSSPHPGEPNVPKGLADRKQNDQRKVSQGRLAPRPPPVEKSKEIA 277
P P + ++P P PK A + +LAP P EK
Sbjct: 546 TTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPKKLTPTTPEKLAPTTP--EKPAPTT 603
Query: 278 IEQKENFDPLQYPETTPKGLAPVTNSSGKMALNSP-QPGPVESELGKQLLKTGWEGSPLP 336
E+ P + TTP+ AP T + A N+P +P P K+ T P P
Sbjct: 604 PEELAPTTPEEPTPTTPEEPAPTTPKAA--APNTPKEPAPTTP---KEPAPT-TPKEPAP 657
Query: 337 RSPTQDAAGVGPPASQGRGPA----GEPMGPEAGSKAELPPTVSRPP 379
+P + A P +G P P P+ + EL PT ++ P
Sbjct: 658 TTPKETA----PTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEP 700
Score = 43.9 bits (102), Expect = 7e-04
Identities = 52/228 (22%), Positives = 75/228 (32%), Gaps = 32/228 (14%)
Query: 177 PGDSPSAVSPNLSPSASPTSSRSNSLTVPTPPGLDVCSGPPSPLPGAPPQKGDEADVSSP 236
P + + +P +PT+ + + T P P P P P E ++P
Sbjct: 379 PAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPKEPAPTTKEPAPTTP 438
Query: 237 HPGEPNVPKGLADRKQNDQRKVSQGRLAPRPPPVEKSKEIAIEQKENFDPLQYPETTPKG 296
P PK A P+ P KE A + P TTPK
Sbjct: 439 KEPAPTAPKKPAP-------------TTPKEPAPTTPKEPAPTTTKEPSP-----TTPKE 480
Query: 297 LAPVTNSSGKMALNSPQPGPVES--ELGKQLLKTGWEGSPLPRSPTQDAAGVGPPASQGR 354
AP T S P P +S K+ T + P P +P + A P + +
Sbjct: 481 PAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTK-EPAPTTPKEPA-----PTTPKK 534
Query: 355 GPAGEPMGPEAGSKAELPPTVSRPPLLRGLSWDSGPEEPGPRLQKVLA 402
P P + E PT ++ P + P+EP P K A
Sbjct: 535 PAPTTPKEPAPTTPKEPAPTTTKKPA------PTTPKEPAPTTPKETA 576
Score = 40.4 bits (93), Expect = 0.007
Identities = 52/221 (23%), Positives = 70/221 (31%), Gaps = 22/221 (9%)
Query: 181 PSAVSPNLSPSASPTSSRSNSLTVPTPPGLDVCSGPPSPLPGAPPQKGDEADVSSPHPGE 240
P++ +P +PT+ +S T P S P +P AP P P
Sbjct: 317 PASTTPK---EPTPTTIKSAPTTPKEPAPTTTKSAPTTPKEPAP------TTTKEPAPTT 367
Query: 241 PNVPKGLADRKQNDQRKVSQGRLAPRPPPVEKSKEIAIEQKE--NFDPLQYPETTPKGLA 298
P P ++ S P P K KE P + TTPK A
Sbjct: 368 PKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPKEPA 427
Query: 299 PVTNSSGKMALNSPQPGPVESELGKQLLKTGWEGSPLPRSPTQDAAGVGPPASQGRGPAG 358
P T P P + K T E P P +P + A P ++ P
Sbjct: 428 PTTKEPAPTTPKEPAPTAPK----KPAPTTPKE--PAPTTPKEPA----PTTTKEPSPT- 476
Query: 359 EPMGPEAGSKAELPPTVSRPPLLRGLSWDSGPEEPGPRLQK 399
P P + P T P S + P+EP P K
Sbjct: 477 TPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTK 517
Score = 33.9 bits (76), Expect = 0.70
Identities = 39/198 (19%), Positives = 78/198 (39%), Gaps = 15/198 (7%)
Query: 633 NLKRTYEKDHAELMEFKKLANQNSSRSCGPSEDGVPRTARSMSLTLGKNMPRRRVSVAVV 692
N K+T + +E + + ++N S S T R + + + R + +
Sbjct: 100 NKKKTKKVIESEEITEEHSVSENQESSSSSSSSSSSSTIRKIKSSKN-SAANRELQKKLK 158
Query: 693 PKFNALNLPGQTPSSSSIPSLPALSESPNG--KGSLPVTSALPALLENGKTNGDPDCEAS 750
K N N + P+ P P + E+ +G G VT+ + ++ K + P +
Sbjct: 159 VKDNKKNRTKKKPT----PKPPVVDEAGSGLDNGDFKVTTPDTSTTQHNKVSTSPKITTA 214
Query: 751 APALTLSCL---EELSQETKARMEEEAYSKGFQEGLKKTKELQDLKEEEEEQKSESPEEP 807
P L + S+ET + +E + K+T + ++K+ S +E
Sbjct: 215 KPINPRPSLPPNSDTSKETSLTVNKETTVE-----TKETTTTNKQTSTDGKEKTTSAKET 269
Query: 808 EEVEETEEEEKGPRSSKL 825
+ +E+T ++ P S L
Sbjct: 270 QSIEKTSAKDLAPTSKVL 287
>gi|67190163 proteoglycan 4 isoform A [Homo sapiens]
Length = 1404
Score = 54.3 bits (129), Expect = 5e-07
Identities = 59/244 (24%), Positives = 87/244 (35%), Gaps = 33/244 (13%)
Query: 180 SPSAVSPNLSPSASPTSSRSNSLTVPTPPGLDVCSGPPSPLPGAP--PQKGDEADVSSPH 237
+P A +PN +PT+ + + T P P P +P AP P+ + P
Sbjct: 668 TPKAAAPNTPKEPAPTTPKEPAPTTPKEP------APTTPKETAPTTPKGTAPTTLKEPA 721
Query: 238 PGEPN--VPKGLADRKQNDQRKVSQGRLAPRPPPVEKSKEIAIEQKENFDPLQYPETTPK 295
P P PK LA + + + AP P + + ++ P + TTPK
Sbjct: 722 PTTPKKPAPKELAPTTTKEPTSTTCDKPAPTTP--KGTAPTTPKEPAPTTPKEPAPTTPK 779
Query: 296 GLAPVTNSSGKMALNSPQPGPVESELGKQLLKTGWEG-------SPLPRSPTQDAAGV-- 346
G AP T L P P + K+L T +G P P +P + A
Sbjct: 780 GTAPTT-------LKEPAPTTPKKPAPKELAPTTTKGPTSTTSDKPAPTTPKETAPTTPK 832
Query: 347 --GPPASQGRGPAGEPMGPEAGSKAELPPTVSRPPLLRGLSWDSGPE---EPGPRLQKVL 401
P + P P S+ P T P + +S PE EP P+ +
Sbjct: 833 EPAPTTPKKPAPTTPETPPPTTSEVSTPTTTKEPTTIHKSPDESTPELSAEPTPKALENS 892
Query: 402 AKLP 405
K P
Sbjct: 893 PKEP 896
Score = 47.4 bits (111), Expect = 6e-05
Identities = 55/227 (24%), Positives = 84/227 (37%), Gaps = 26/227 (11%)
Query: 167 TRRGRKSRSSPGDSPSAVSPNLSPSASPTSSRSNSLT-----VPTPPGLDVCSGPPSPLP 221
T+ + P + + +P SPT+++ + T PT P + P P P
Sbjct: 527 TKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAP 586
Query: 222 GAP----PQKGDEADVSSPHPGEPNVPKGLADRKQNDQRKVSQGRLAPRPPPVEKSKEIA 277
P P + ++P P PK A + +LAP P EK
Sbjct: 587 TTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPKKLTPTTPEKLAPTTP--EKPAPTT 644
Query: 278 IEQKENFDPLQYPETTPKGLAPVTNSSGKMALNSP-QPGPVESELGKQLLKTGWEGSPLP 336
E+ P + TTP+ AP T + A N+P +P P K+ T P P
Sbjct: 645 PEELAPTTPEEPTPTTPEEPAPTTPKAA--APNTPKEPAPTTP---KEPAPT-TPKEPAP 698
Query: 337 RSPTQDAAGVGPPASQGRGPA----GEPMGPEAGSKAELPPTVSRPP 379
+P + A P +G P P P+ + EL PT ++ P
Sbjct: 699 TTPKETA----PTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEP 741
Score = 43.9 bits (102), Expect = 7e-04
Identities = 52/228 (22%), Positives = 75/228 (32%), Gaps = 32/228 (14%)
Query: 177 PGDSPSAVSPNLSPSASPTSSRSNSLTVPTPPGLDVCSGPPSPLPGAPPQKGDEADVSSP 236
P + + +P +PT+ + + T P P P P P E ++P
Sbjct: 420 PAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPKEPAPTTKEPAPTTP 479
Query: 237 HPGEPNVPKGLADRKQNDQRKVSQGRLAPRPPPVEKSKEIAIEQKENFDPLQYPETTPKG 296
P PK A P+ P KE A + P TTPK
Sbjct: 480 KEPAPTAPKKPAP-------------TTPKEPAPTTPKEPAPTTTKEPSP-----TTPKE 521
Query: 297 LAPVTNSSGKMALNSPQPGPVES--ELGKQLLKTGWEGSPLPRSPTQDAAGVGPPASQGR 354
AP T S P P +S K+ T + P P +P + A P + +
Sbjct: 522 PAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTK-EPAPTTPKEPA-----PTTPKK 575
Query: 355 GPAGEPMGPEAGSKAELPPTVSRPPLLRGLSWDSGPEEPGPRLQKVLA 402
P P + E PT ++ P + P+EP P K A
Sbjct: 576 PAPTTPKEPAPTTPKEPAPTTTKKPA------PTTPKEPAPTTPKETA 617
Score = 40.4 bits (93), Expect = 0.007
Identities = 52/221 (23%), Positives = 70/221 (31%), Gaps = 22/221 (9%)
Query: 181 PSAVSPNLSPSASPTSSRSNSLTVPTPPGLDVCSGPPSPLPGAPPQKGDEADVSSPHPGE 240
P++ +P +PT+ +S T P S P +P AP P P
Sbjct: 358 PASTTPK---EPTPTTIKSAPTTPKEPAPTTTKSAPTTPKEPAP------TTTKEPAPTT 408
Query: 241 PNVPKGLADRKQNDQRKVSQGRLAPRPPPVEKSKEIAIEQKE--NFDPLQYPETTPKGLA 298
P P ++ S P P K KE P + TTPK A
Sbjct: 409 PKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPKEPA 468
Query: 299 PVTNSSGKMALNSPQPGPVESELGKQLLKTGWEGSPLPRSPTQDAAGVGPPASQGRGPAG 358
P T P P + K T E P P +P + A P ++ P
Sbjct: 469 PTTKEPAPTTPKEPAPTAPK----KPAPTTPKE--PAPTTPKEPA----PTTTKEPSPT- 517
Query: 359 EPMGPEAGSKAELPPTVSRPPLLRGLSWDSGPEEPGPRLQK 399
P P + P T P S + P+EP P K
Sbjct: 518 TPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTK 558
Score = 33.9 bits (76), Expect = 0.70
Identities = 39/198 (19%), Positives = 78/198 (39%), Gaps = 15/198 (7%)
Query: 633 NLKRTYEKDHAELMEFKKLANQNSSRSCGPSEDGVPRTARSMSLTLGKNMPRRRVSVAVV 692
N K+T + +E + + ++N S S T R + + + R + +
Sbjct: 141 NKKKTKKVIESEEITEEHSVSENQESSSSSSSSSSSSTIRKIKSSKN-SAANRELQKKLK 199
Query: 693 PKFNALNLPGQTPSSSSIPSLPALSESPNG--KGSLPVTSALPALLENGKTNGDPDCEAS 750
K N N + P+ P P + E+ +G G VT+ + ++ K + P +
Sbjct: 200 VKDNKKNRTKKKPT----PKPPVVDEAGSGLDNGDFKVTTPDTSTTQHNKVSTSPKITTA 255
Query: 751 APALTLSCL---EELSQETKARMEEEAYSKGFQEGLKKTKELQDLKEEEEEQKSESPEEP 807
P L + S+ET + +E + K+T + ++K+ S +E
Sbjct: 256 KPINPRPSLPPNSDTSKETSLTVNKETTVE-----TKETTTTNKQTSTDGKEKTTSAKET 310
Query: 808 EEVEETEEEEKGPRSSKL 825
+ +E+T ++ P S L
Sbjct: 311 QSIEKTSAKDLAPTSKVL 328
>gi|19924097 synapsin I isoform Ib [Homo sapiens]
Length = 669
Score = 54.3 bits (129), Expect = 5e-07
Identities = 73/294 (24%), Positives = 104/294 (35%), Gaps = 61/294 (20%)
Query: 120 SLTSVDPAGHIIDLVNDQLPDISISEEDKKKNLALLEEAKLVSE--RFLTRRGRKSRSSP 177
+L D HII++V +P I +++ K+ + L K+ R R R S
Sbjct: 374 ALHGKDGRDHIIEVVGSSMPLIGDHQDEDKQLIVELVVNKMAQALPRQRQRDASPGRGSH 433
Query: 178 GDSPSAVSPNLSPSASPTSSRSNSLTVPTPPGLDVCSGPPSPLPGA-----------PPQ 226
G +PS + L S + + P P G GPP P PG PPQ
Sbjct: 434 GQTPSPGALPLGRQTSQQPAGPPAQQRPPPQG-----GPPQPGPGPQRQGPPLQQRPPPQ 488
Query: 227 KGDEADVSSPHPGEPNVPKGLADRKQNDQRKVSQ--------GRLA------PRPPPVEK 272
P G P +P+ L Q+ SQ GR + P PP +
Sbjct: 489 GQQHLSGLGPPAGSP-LPQRLPSPTSAPQQPASQAAPPTQGQGRQSRPVAGGPGAPPAAR 547
Query: 273 SKEIAIEQKENFDPLQYPETTPKGLAPVTNSSGKMALNSPQPGPVESELGKQLLKTGWEG 332
Q++ P +T+ G AP +SG + GP + G
Sbjct: 548 PPASPSPQRQAGPPQATRQTSVSGPAP-PKASGAPPGGQQRQGPPQKPPG---------- 596
Query: 333 SPLPRSPTQDAAGVGP-----------PASQGRGPAGEPMGPEAGSK--AELPP 373
P PT+ A+ GP P G GPAG P P+ K ++PP
Sbjct: 597 ---PAGPTRQASQAGPVPRTGPPTTQQPRPSGPGPAGRPK-PQLAQKPSQDVPP 646
Score = 38.1 bits (87), Expect = 0.037
Identities = 30/109 (27%), Positives = 43/109 (39%), Gaps = 22/109 (20%)
Query: 271 EKSKEIAIEQKENFDPLQYPETTPKGLAPVTNSSGKMALNSPQPGPVESELGKQLLKTGW 330
++ K++ +E N P + +P S G+ +P PG +
Sbjct: 400 DEDKQLIVELVVNKMAQALPRQRQRDASPGRGSHGQ----TPSPGAL------------- 442
Query: 331 EGSPLPRSPTQDAAGVGPPASQGRGPAGEPMGPEAGSKAELPPTVSRPP 379
PL R +Q AG PPA Q P G P P G + + PP RPP
Sbjct: 443 ---PLGRQTSQQPAG--PPAQQRPPPQGGPPQPGPGPQRQGPPLQQRPP 486
Score = 35.4 bits (80), Expect = 0.24
Identities = 51/198 (25%), Positives = 73/198 (36%), Gaps = 25/198 (12%)
Query: 178 GDSPSAVSPNLSPSASPTSSRSNSLTVPTPP--GLDVCSGPPSPLPGAPPQKGDEADVSS 235
G P A SP SPTS+ + PP G S P + PGAPP ++
Sbjct: 495 GLGPPAGSPLPQRLPSPTSAPQQPASQAAPPTQGQGRQSRPVAGGPGAPP--------AA 546
Query: 236 PHPGEPNVPKGLADRKQNDQRKVSQGRLAPRPPPVEKSKEIAIEQKENFDPLQYPETTPK 295
P P+ + + Q VS P PP + ++ Q P P
Sbjct: 547 RPPASPSPQRQAGPPQATRQTSVS----GPAPPKASGAPPGGQQR-------QGPPQKPP 595
Query: 296 GLAPVTNSSGKMALNSPQPGPVESELGKQLLKTGWEGSPLPRSPTQDAAGVGPPASQGRG 355
G A T + + A P+ GP ++ + G G P P+ + + V PPA+ G
Sbjct: 596 GPAGPTRQASQ-AGPVPRTGPPTTQQPRP-SGPGPAGRPKPQLAQKPSQDVPPPATAAAG 653
Query: 356 PAGEPMGPEAGSKAELPP 373
G P S A+ P
Sbjct: 654 --GPPHPQLKASPAQAQP 669
>gi|41349482 proline-rich protein BstNI subfamily 1 isoform 1
preproprotein [Homo sapiens]
Length = 331
Score = 54.3 bits (129), Expect = 5e-07
Identities = 58/212 (27%), Positives = 72/212 (33%), Gaps = 24/212 (11%)
Query: 177 PGDSPSAVSPNLSPSASPTSSRSNSLTVPTPPGLDVCSGPPSP--LPGAPPQKGDEADVS 234
P P P S SP S P P G + GPP P P PP +G +
Sbjct: 134 PPGKPQGPPPQGDKSRSPRSPPGKPQG-PPPQGGNQPQGPPPPPGKPQGPPPQGGKKPQG 192
Query: 235 SPHPGEPNVPKGLADRKQNDQRKVS-------QGRLAPRPPPVEKSKEIAIEQKENFDPL 287
P PG+P P D+ ++ Q QG P+ PP K P
Sbjct: 193 PPPPGKPQGPPPQGDKSRSSQSPPGKPQGPPPQGGNQPQGPPPPPGKPQG--------PP 244
Query: 288 QYPETTPKGLAPVTNSSGKMALNSPQPGPVESELGKQLLKTGWEGSPLPRSPTQDAAGVG 347
P+G P G A + S GK EG+ P+ P A G
Sbjct: 245 PQGGNKPQGPPPPGKPQGPPAQGGSKSQSARSPPGKPQGPPQQEGNN-PQGPPPPAG--G 301
Query: 348 PPASQGRGPAGEPMGPEAGSKAELPPTVSRPP 379
P PAG+P GP + P SRPP
Sbjct: 302 NPQQPQAPPAGQPQGPPRPPQGGRP---SRPP 330
Score = 53.9 bits (128), Expect = 7e-07
Identities = 68/265 (25%), Positives = 91/265 (34%), Gaps = 23/265 (8%)
Query: 177 PGDSPSAVSPNLSPSASPTSSRSNSLTVPTPPGLDVCSGPPSP--LPGAPPQKGDEADVS 234
P P P S SP S P P G + GPP P P PP +G
Sbjct: 73 PPGKPQGPPPQGDKSRSPRSPPGKPQG-PPPQGGNQPQGPPPPPGKPQGPPPQGGNRPQG 131
Query: 235 SPHPGEPNVPKGLADRKQND-------QRKVSQGRLAPRPPPVEKSKEIAIEQKENFDPL 287
P PG+P P D+ ++ Q QG P+ PP K + P
Sbjct: 132 PPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGKKPQ 191
Query: 288 QYPET-TPKGLAPVTNSSGKMALNSPQPGPVESELGKQLLKTGWEGSPLPRSPTQDAAGV 346
P P+G P + S +P + G Q +G P P Q
Sbjct: 192 GPPPPGKPQGPPPQGDKSRSSQSPPGKPQGPPPQGGNQP-----QGPPPPPGKPQGPPPQ 246
Query: 347 GPPASQGRGPAGEPMGPEA--GSKAEL----PPTVSRPPLLRGLSWDSGPEEPGPRLQKV 400
G QG P G+P GP A GSK++ P PP G + P G Q+
Sbjct: 247 GGNKPQGPPPPGKPQGPPAQGGSKSQSARSPPGKPQGPPQQEGNNPQGPPPPAGGNPQQP 306
Query: 401 LAKLPLAEEEKRFAGKAGGKLAKAP 425
A P + + GG+ ++ P
Sbjct: 307 QAP-PAGQPQGPPRPPQGGRPSRPP 330
Score = 49.3 bits (116), Expect = 2e-05
Identities = 60/241 (24%), Positives = 77/241 (31%), Gaps = 29/241 (12%)
Query: 178 GDSPSAVSPNLSPSASPTSSRSNSLTVPTPPGL--------DVCSGPPSPL---PGAPPQ 226
G+ P P P N P PPG D P SP G PPQ
Sbjct: 44 GNKPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQ 103
Query: 227 KGDEADVSSPHPGEPNVPKGLADRKQNDQRKVSQGRLAPRPPPVEKSKEIAIEQKENFDP 286
G++ P PG+P P + Q G+ PP +KS+ + P
Sbjct: 104 GGNQPQGPPPPPGKPQGPPPQGGNR--PQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQGP 161
Query: 287 LQYPETTPKGLAPVTN-------SSGKMALNSPQPGPVES---ELGKQLLKTGWEGSPLP 336
P+G P GK P PG + + K G P
Sbjct: 162 PPQGGNQPQGPPPPPGKPQGPPPQGGKKPQGPPPPGKPQGPPPQGDKSRSSQSPPGKPQG 221
Query: 337 RSPTQDAAGVGPPASQGRGPAGEPMGPEAGSKAELPPTVSR---PPLLRGLSWDSGPEEP 393
P GPP G+ P G P P+ G+K + PP + PP G S P
Sbjct: 222 PPPQGGNQPQGPPPPPGK-PQGPP--PQGGNKPQGPPPPGKPQGPPAQGGSKSQSARSPP 278
Query: 394 G 394
G
Sbjct: 279 G 279
Score = 39.3 bits (90), Expect = 0.017
Identities = 48/187 (25%), Positives = 68/187 (36%), Gaps = 27/187 (14%)
Query: 217 PSPLPGAP----PQKGDEADVSSPHPGEPNVPKGLADRKQNDQRKVSQGRLAPRPPPVEK 272
PS + G P PQ G++ P PG+P P QG P+ PP
Sbjct: 29 PSLIAGNPQGPSPQGGNKPQGPPPPPGKPQGPP-------------PQGGNKPQGPPPPG 75
Query: 273 SKEIAIEQKENFDPLQYPETTPKGLAPVTNSSGKMALNSPQPGPVESELGKQLLKTGWEG 332
+ Q + + P P+G P G P P P + + +G
Sbjct: 76 KPQGPPPQGDKSRSPRSPPGKPQGPPP----QGGNQPQGPPPPPGKPQGPPPQGGNRPQG 131
Query: 333 SPLPRSPTQDAAGVGPPASQGRGPAGEPMG--PEAGSKAE-LPPTVSRP--PLLRGLSWD 387
P P P Q G + R P G+P G P+ G++ + PP +P P +G
Sbjct: 132 PPPPGKP-QGPPPQGDKSRSPRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGKKP 190
Query: 388 SGPEEPG 394
GP PG
Sbjct: 191 QGPPPPG 197
>gi|119395760 diaphanous 1 isoform 2 [Homo sapiens]
Length = 1263
Score = 53.5 bits (127), Expect = 9e-07
Identities = 128/610 (20%), Positives = 218/610 (35%), Gaps = 87/610 (14%)
Query: 132 DLVNDQLPDISISEEDKKKNLALL--EEAKLVSERFLTRRGRKSRSSPGDS--PSAVSPN 187
D ++ + I+ ++D + ++ L E AKL E ++ S S+ + PS S
Sbjct: 512 DALHSEKQQIATEKQDLEAEVSQLTGEVAKLTKELEDAKKEMASLSAAAITVPPSVPSRA 571
Query: 188 LSPSASPTSSRSNSLTVPTP-PGLDVCSGPPSPLPGAPPQKGDEADVSSPHPGEPNVPKG 246
P A P S ++ P P PG PP P P PP +SSP P++P G
Sbjct: 572 PVPPAPPLPGDSGTIIPPPPAPGDSTTPPPPPPPPPPPPPLPGGVCISSP----PSLPGG 627
Query: 247 LADRKQNDQRKVSQGRLAPRPPPVEKSKEIAIEQKENFDPLQYPETTPKGLAPVTNSSGK 306
A + +S P PPP+ + I P P T P S +
Sbjct: 628 TAI---SPPPPLSGDATIPPPPPLPEGVGIP-------SPSSLPGGTAIPPPPPLPGSAR 677
Query: 307 MALNSPQPGPVESELG---KQLLKTGWEGSPLPRSPTQDAAGVGPPASQGRGPAGEPMGP 363
+ P P P+ G G G P P P G+ PP GP P P
Sbjct: 678 IP---PPPPPLPGSAGIPPPPPPLPGEAGMPPPPPPLPGGPGIPPPPPFPGGPGIPPPPP 734
Query: 364 EAGSKAELPPTVSRPPLLRGLSWDSGPEEPGPRLQKVLAKLPLAEEEKRFAGKAGGKLAK 423
G +PP PP G + P P K L K + ++ L++
Sbjct: 735 GMG----MPPP---PPF--GFGVPAAPVLPFGLTPKKLYKPEVQLRRPNWSKLVAEDLSQ 785
Query: 424 APGLKDFQIQVQPVRMQKLTKLREEHILMRNQNLVGLKLPDLSEAAEQEKGLPSELSPAI 483
F +V+ R + + + Q D E E++K + + +
Sbjct: 786 ----DCFWTKVKEDRFENNELFAKLTLTFSAQTKTSKAKKD-QEGGEEKKSVQKKKVKEL 840
Query: 484 EEEESKSGLDVMPNISDVLLRKLRVHR-SLPGSAPPLTEKEVENVFVQL-------SLAF 535
+ +SK+ ++ + + + L + LTE ++N+ Q+ L+
Sbjct: 841 KVLDSKTAQNLSIFLGSFRMPYQEIKNVILEVNEAVLTESMIQNLIKQMPEPEQLKMLSE 900
Query: 536 RNDSY-----------------TLESRINQAERERNLTEENTEKELENFKASITSSASLW 578
D Y L R+N L + +++EN K I S +
Sbjct: 901 LKDEYDDLAESEQFGVVMGTVPRLRPRLNAI-----LFKLQFSEQVENIKPEIVSVTAAC 955
Query: 579 HHCEHRETYQKLLEDIAVLHRLAARLSSRAEVVG---AVRQEKRMSKATEVMMQYVENLK 635
E++ LLE ++ S A G + + R +K+T+ M + L
Sbjct: 956 EELRKSESFSNLLEITLLVGNYMNAGSRNAGAFGFNISFLCKLRDTKSTDQKMTLLHFLA 1015
Query: 636 RTYEKDHAELMEF-KKLANQNSSRSCGPSEDGVPRTARSMSLTLGKNMPRRRVSVAVVPK 694
E D+ ++++F +LA+ V + +R + L KN+ + + ++ V +
Sbjct: 1016 ELCENDYPDVLKFPDELAH-------------VEKASRVSAENLQKNLDQMKKQISDVER 1062
Query: 695 FNALNLPGQT 704
+ N P T
Sbjct: 1063 -DVQNFPAAT 1071
>gi|119395758 diaphanous 1 isoform 1 [Homo sapiens]
Length = 1272
Score = 53.5 bits (127), Expect = 9e-07
Identities = 128/610 (20%), Positives = 218/610 (35%), Gaps = 87/610 (14%)
Query: 132 DLVNDQLPDISISEEDKKKNLALL--EEAKLVSERFLTRRGRKSRSSPGDS--PSAVSPN 187
D ++ + I+ ++D + ++ L E AKL E ++ S S+ + PS S
Sbjct: 521 DALHSEKQQIATEKQDLEAEVSQLTGEVAKLTKELEDAKKEMASLSAAAITVPPSVPSRA 580
Query: 188 LSPSASPTSSRSNSLTVPTP-PGLDVCSGPPSPLPGAPPQKGDEADVSSPHPGEPNVPKG 246
P A P S ++ P P PG PP P P PP +SSP P++P G
Sbjct: 581 PVPPAPPLPGDSGTIIPPPPAPGDSTTPPPPPPPPPPPPPLPGGVCISSP----PSLPGG 636
Query: 247 LADRKQNDQRKVSQGRLAPRPPPVEKSKEIAIEQKENFDPLQYPETTPKGLAPVTNSSGK 306
A + +S P PPP+ + I P P T P S +
Sbjct: 637 TAI---SPPPPLSGDATIPPPPPLPEGVGIP-------SPSSLPGGTAIPPPPPLPGSAR 686
Query: 307 MALNSPQPGPVESELG---KQLLKTGWEGSPLPRSPTQDAAGVGPPASQGRGPAGEPMGP 363
+ P P P+ G G G P P P G+ PP GP P P
Sbjct: 687 IP---PPPPPLPGSAGIPPPPPPLPGEAGMPPPPPPLPGGPGIPPPPPFPGGPGIPPPPP 743
Query: 364 EAGSKAELPPTVSRPPLLRGLSWDSGPEEPGPRLQKVLAKLPLAEEEKRFAGKAGGKLAK 423
G +PP PP G + P P K L K + ++ L++
Sbjct: 744 GMG----MPPP---PPF--GFGVPAAPVLPFGLTPKKLYKPEVQLRRPNWSKLVAEDLSQ 794
Query: 424 APGLKDFQIQVQPVRMQKLTKLREEHILMRNQNLVGLKLPDLSEAAEQEKGLPSELSPAI 483
F +V+ R + + + Q D E E++K + + +
Sbjct: 795 ----DCFWTKVKEDRFENNELFAKLTLTFSAQTKTSKAKKD-QEGGEEKKSVQKKKVKEL 849
Query: 484 EEEESKSGLDVMPNISDVLLRKLRVHR-SLPGSAPPLTEKEVENVFVQL-------SLAF 535
+ +SK+ ++ + + + L + LTE ++N+ Q+ L+
Sbjct: 850 KVLDSKTAQNLSIFLGSFRMPYQEIKNVILEVNEAVLTESMIQNLIKQMPEPEQLKMLSE 909
Query: 536 RNDSY-----------------TLESRINQAERERNLTEENTEKELENFKASITSSASLW 578
D Y L R+N L + +++EN K I S +
Sbjct: 910 LKDEYDDLAESEQFGVVMGTVPRLRPRLNAI-----LFKLQFSEQVENIKPEIVSVTAAC 964
Query: 579 HHCEHRETYQKLLEDIAVLHRLAARLSSRAEVVG---AVRQEKRMSKATEVMMQYVENLK 635
E++ LLE ++ S A G + + R +K+T+ M + L
Sbjct: 965 EELRKSESFSNLLEITLLVGNYMNAGSRNAGAFGFNISFLCKLRDTKSTDQKMTLLHFLA 1024
Query: 636 RTYEKDHAELMEF-KKLANQNSSRSCGPSEDGVPRTARSMSLTLGKNMPRRRVSVAVVPK 694
E D+ ++++F +LA+ V + +R + L KN+ + + ++ V +
Sbjct: 1025 ELCENDYPDVLKFPDELAH-------------VEKASRVSAENLQKNLDQMKKQISDVER 1071
Query: 695 FNALNLPGQT 704
+ N P T
Sbjct: 1072 -DVQNFPAAT 1080
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 1124
Score = 53.1 bits (126), Expect = 1e-06
Identities = 71/256 (27%), Positives = 91/256 (35%), Gaps = 25/256 (9%)
Query: 186 PNLSPSASPTSSRSNSLTVP---TPPGLDVC--SGPPSPLPGAPPQKGDEADVSSPHPGE 240
P+L+P P + S LT P TPP C PPSPL PP+ + +++P
Sbjct: 539 PSLAPP--PLQTASAPLTTPHLETPPCPAPCPLQAPPSPLTTPPPET--PSSIATP---P 591
Query: 241 PNVPKGLADRKQNDQRKVSQGRLA---PRPPPVEKSKEIAIEQKENFDPLQYPETTPKGL 297
P P LA LA P+ PP + P P TP
Sbjct: 592 PQAPPALASPPLQGLPSPPLSPLATPPPQAPPXLALPPLQAPPSPPASPPLSPLATPSPQ 651
Query: 298 APVTNSSGKMALNSP-QPGPVESELGKQLLKTGWEGSPLPRSPTQDAAGVGPPASQ--GR 354
AP N+ L +P P P SP P+Q + P Q
Sbjct: 652 AP--NALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPS 709
Query: 355 GPAGEPMGPEAGSKAELPPTVSRPPLLRGLSWDSGP-----EEPGPRLQKVLAKLPLAEE 409
PA PM P A + PP ++ PPL S + P P PR+ +LA PL
Sbjct: 710 PPASPPMSPSATPPPQAPPPLAAPPLQVPPSPPASPPMSPSATPPPRVPPLLAAPPLQVP 769
Query: 410 EKRFAGKAGGKLAKAP 425
A LAK P
Sbjct: 770 PSPPASLPMSPLAKPP 785
Score = 45.4 bits (106), Expect = 2e-04
Identities = 57/226 (25%), Positives = 79/226 (34%), Gaps = 20/226 (8%)
Query: 181 PSAVSPNLSPSASPTSSRSNSLTVPTPPGLDVCSGPPSPLPGAPPQKGDEADVSSPHPGE 240
P A P P + P S + P P + + PP +P +PP + ++ P
Sbjct: 729 PLAAPPLQVPPSPPASPPMSPSATPPPRVPPLLAAPPLQVPPSPPASLPMSPLAKP---P 785
Query: 241 PNVPKGLADRKQNDQRKVSQGRLAPRPPPVEKSKEIAIEQKENFDPLQYPETTPKGL--- 297
P P LA Q S P P S + + P Q P L
Sbjct: 786 PQAPPALATPPL--QALPSPPASFPGQAPFSPSASLPMSPLAT-PPPQAPPVLAAPLLQV 842
Query: 298 --APVTNSSGKMALNSPQPGPVESELGKQLLKTGWEGSPLP--RSPTQDAAG---VGPPA 350
+P + + + P PGP S G +L G P P RSP+ +G G +
Sbjct: 843 PPSPPASPTLQAPRRPPTPGPDTSVSGPRLTLALAPGPPPPPSRSPSSTLSGPDLAGHSS 902
Query: 351 SQGRGP---AGEPMGPEAGSKAELPPTVSRPPLLRGLSWDSGPEEP 393
S P G GPE G+ A PP + +W GP P
Sbjct: 903 SATSTPEELRGYDSGPEGGAAAS-PPPDAELAACHPAAWSRGPAPP 947
Score = 44.7 bits (104), Expect = 4e-04
Identities = 58/225 (25%), Positives = 79/225 (35%), Gaps = 38/225 (16%)
Query: 176 SPGDSPSAVSPNLSPSASPTSSRSNSLTVPTPPGLDVCSGPPSPLPGAPPQKGDEADVSS 235
SP SP +P SP ASP S S + PP L + PP +P +PP + ++
Sbjct: 666 SPPPSPPVQAP-FSPPASPPVSPSATPPSQAPPSL---AAPPLQVPPSPPASPPMSPSAT 721
Query: 236 PHPGEPNVPKGLADRKQNDQRKVSQGRLAPRPPPVEKSKEIAIEQKENFDPLQYPETTPK 295
P P P P A Q + P PP P P TP
Sbjct: 722 PPPQAP--PPLAAPPLQ----------VPPSPPA---------------SPPMSPSATPP 754
Query: 296 GLAPVTNSSGKMALNSPQPGPVESELGKQLLKTGWEGSPLPRSPTQDAAGVGPPASQGRG 355
P ++ + + P P S L K + P +P A P + G+
Sbjct: 755 PRVPPLLAAPPLQV---PPSPPASLPMSPLAKPPPQAPPALATPPLQALPSPPASFPGQA 811
Query: 356 P----AGEPMGPEAGSKAELPPTVSRPPLLRGLSWDSGPEEPGPR 396
P A PM P A + PP ++ P L S + P PR
Sbjct: 812 PFSPSASLPMSPLATPPPQAPPVLAAPLLQVPPSPPASPTLQAPR 856
Score = 44.3 bits (103), Expect = 5e-04
Identities = 71/260 (27%), Positives = 92/260 (35%), Gaps = 64/260 (24%)
Query: 175 SSPGDSPSAVSPNL--------------SPSASPTSSRSNSLTVPTPPGLDVCSGPPSPL 220
+SP SPSA P+ SP ASP S S + PP L + PP +
Sbjct: 681 ASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPL---AAPPLQV 737
Query: 221 PGAPPQKGDEADVSSPHPGEPNVPKGLA----DRKQNDQRKVSQGRLAPRPPPVEKSKEI 276
P +PP + ++P P VP LA + + LA PP +
Sbjct: 738 PPSPPASPPMSPSATP---PPRVPPLLAAPPLQVPPSPPASLPMSPLAKPPPQAPPALAT 794
Query: 277 AIEQKENFDPLQYPETTPKGLAPVTNSS----GKMALNSPQPGPVESELGKQLLKTGWEG 332
Q P +P G AP + S+ +A PQ PV L LL+
Sbjct: 795 PPLQALPSPPASFP-----GQAPFSPSASLPMSPLATPPPQAPPV---LAAPLLQV--PP 844
Query: 333 SPLPRSPTQD---------------------AAGVGPPASQGRGPAGEPMGPEAGSKAEL 371
SP P SPT A GPP R P+ GP+ +
Sbjct: 845 SP-PASPTLQAPRRPPTPGPDTSVSGPRLTLALAPGPPPPPSRSPSSTLSGPDLAGHSS- 902
Query: 372 PPTVSRPPLLRGLSWDSGPE 391
S P LRG +DSGPE
Sbjct: 903 -SATSTPEELRG--YDSGPE 919
Score = 43.5 bits (101), Expect = 9e-04
Identities = 57/213 (26%), Positives = 82/213 (38%), Gaps = 32/213 (15%)
Query: 175 SSPGDSPSAVSPNLSPSASPTSSRSNSLTVPTPPGLDVCSGPPSPLPGAPPQKGDEADVS 234
++P P + SP +PS S T +R P PP + + P+ LP +PP A
Sbjct: 292 AAPALGPLSSSPLATPSPSGTKAR------PVPPPDNAATPLPATLPPSPPL----ATPL 341
Query: 235 SPHPGEPNVPKGLADRKQNDQRKVSQGRLAPRPPPVEKSKEIAIEQKENFDPLQYPE--T 292
P P+ P L SQ + PP++ + + P+Q P T
Sbjct: 342 PLAPPSPSAPPSLQTLPSPPATPPSQAPPSMTTPPMQAPPSL-----QTIPPIQVPHSLT 396
Query: 293 TPKGLAPVTNSSGKMALNSPQPGPVESELGKQLLKTGWEGSPLPRSPTQDAAGVGPPASQ 352
+P AP +AL+S Q + LG L+ S L SP Q A + P+
Sbjct: 397 SPSLQAP----PSPLALSSLQ---ATTSLGSPTLQA--THSFLTMSPRQTQASLTSPSRP 447
Query: 353 GRGPAGEPMGPEAGSKAELPPTVSRPPLLRGLS 385
P P P + LP + PPL LS
Sbjct: 448 ASTP---PDSPPLQAPLSLP---ASPPLQTSLS 474
Score = 42.7 bits (99), Expect = 0.002
Identities = 59/234 (25%), Positives = 80/234 (34%), Gaps = 30/234 (12%)
Query: 180 SPSAVSPNLSPSASPTSSRSNSLTVPTPPGLDVCSGPPSPLPGAPPQKGDEADV------ 233
SP P +PS+ T + +PP + S P SPL PPQ +
Sbjct: 574 SPLTTPPPETPSSIATPPPQAPPALASPPLQGLPSPPLSPLATPPPQAPPXLALPPLQAP 633
Query: 234 SSPHPGEPNVPKGLADRKQNDQRKVSQGRLAPRPPPVEKSKEIAIEQKENFDPLQYPETT 293
SP P P + + V + PPP S + P P T
Sbjct: 634 PSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPP---SPPVQAPFSPPASPPVSPSAT 690
Query: 294 PKGLAPVTNSSGKMAL-NSPQPGPVESELGKQLLKTGWEGSPLPRSPTQDAAGVGPPAS- 351
P AP + ++ + + SP P S +P P++P AA PP
Sbjct: 691 PPSQAPPSLAAPPLQVPPSPPASPPMSP----------SATPPPQAPPPLAA---PPLQV 737
Query: 352 QGRGPAGEPMGPEAGSKAELPPTVSRPPLLRGLSWDSGPEEPGPRLQKVLAKLP 405
PA PM P A +PP ++ PPL P P LAK P
Sbjct: 738 PPSPPASPPMSPSATPPPRVPPLLAAPPL------QVPPSPPASLPMSPLAKPP 785
Score = 32.7 bits (73), Expect = 1.6
Identities = 60/277 (21%), Positives = 85/277 (30%), Gaps = 56/277 (20%)
Query: 167 TRRGRKSRSSPGDSPSAV--------SPNLSPSASPTSSRSNSLTVPTPPGLD------- 211
TR S +P P A + N SP + R++ T P P G
Sbjct: 80 TRSAGTSSRNPASRPPASGRGERAPPAKNTSPGPVSSPGRASGTTRPGPLGQKGLRISAE 139
Query: 212 --VCSGPPSPLPGAPP-QKGDEADVSSPHPGEPNVPKGLADRKQNDQRKVSQGRLAPRPP 268
V G + P G D S P PG P+ +A R + +V PRP
Sbjct: 140 ETVARGKATEAPKRSALSAGARRDTSGPTPGTPS--PAMARRSRAAGTEVG----LPRPA 193
Query: 269 PVEKSKEIAIEQKENFDPLQYPETTPKGLAPVTNSSGKMALNSPQPGPVESELGKQLLKT 328
P + P +G +S+ + + P P ++
Sbjct: 194 PSAR-----------------PRPPTEGPRKSVSSASEHSTTEPSPA-----ARRRPSAG 231
Query: 329 GWEGSPLPRSPTQDAAGVGPPASQGRGPAGEPMGPEAGSKAELPPTVSRPPLLRGLSWDS 388
G P RS + A + PA G G P P S+ P +GL
Sbjct: 232 GGLQRPASRSLSSSATPLSSPARSGPSARGTPRAPAHPSQ----------PKPKGLQALR 281
Query: 389 GPEEPGPRLQKVLAKLPLAEEEKRFAGKAGGKLAKAP 425
P+ PR A PL+ +G K P
Sbjct: 282 PPQVTPPRKDAAPALGPLSSSPLATPSPSGTKARPVP 318
>gi|111118972 collagen, type XI, alpha 2 isoform 2 preproprotein [Homo
sapiens]
Length = 1650
Score = 52.0 bits (123), Expect = 2e-06
Identities = 74/276 (26%), Positives = 95/276 (34%), Gaps = 49/276 (17%)
Query: 169 RGRKSRSSPGDSPSAVSPNLSPSASPTSSRSNS------LTVPTPPGLDVCSGPPSP--- 219
+G K P P + P P A+ + G +GPP P
Sbjct: 1012 KGNKGEHGPPGPPGPIGPVGQPGAAGADGEPGARGPQGHFGAKGDEGTRGFNGPPGPIGL 1071
Query: 220 --LPGAPPQKGDEADVSSPHPGEPNVPKGLADRKQNDQRKVSQGRLAPRPPPVEKSKEIA 277
LPG +KG+ DV P P P+G A D + G + PP EK
Sbjct: 1072 QGLPGPSGEKGETGDVGPMGPPGPPGPRGPAGPNGADGPQGPPGGVGNLGPPGEKG---- 1127
Query: 278 IEQKENFDPLQYPETTPKGLAPVTNSSGKMALNSPQPGPVESELGKQLLKTGWEGSPLPR 337
E E+ P E KG G+ S QPG G P P+
Sbjct: 1128 -EPGESGSPGIQGEPGVKGPRGERGEKGE----SGQPGE--------------PGPPGPK 1168
Query: 338 SPTQDAAGVGPPASQG----RGPAGE--PMGPEAGSKAELPPTVSRPPLLRGLSWDSGPE 391
PT D G P G GP GE P G + P G + ++GP
Sbjct: 1169 GPTGDDGPKGNPGPVGFPGDPGPPGEGGPRGQDGAKGDRGEDGEPGQPGSPGPTGENGP- 1227
Query: 392 EPGPRLQKVLAKLPLAEEEKRFAGKAGGKLAKA-PG 426
PGP ++ A P +E G+ GGK AK PG
Sbjct: 1228 -PGPLGKRGPAGSPGSE------GRQGGKGAKGDPG 1256
Score = 41.6 bits (96), Expect = 0.003
Identities = 54/204 (26%), Positives = 73/204 (35%), Gaps = 49/204 (24%)
Query: 202 LTVPTPPGLDVCSGPPSPL--PGAPPQKGDEADVSSPHPGEPNVPKGLADRKQNDQRKVS 259
L + PPG +G P PL PG+P KG+ D+ P P P+GL R+
Sbjct: 397 LALRGPPGPMGYTGRPGPLGQPGSPGLKGESGDLG---PQGPRGPQGLTGPPGKAGRRGR 453
Query: 260 QGRLAPRPPPVEKSKEIAIEQKENFDPLQYPETTPKGLAPVTNSSGKMALNSPQPGPVES 319
G R P + ++ FD GL + G
Sbjct: 454 AGADGARGMPGDPG----VKGDRGFD----------GLPGLPGEKGH-----------RG 488
Query: 320 ELGKQLLKTGWEGSPLPRSPTQDAAGVGPPASQGR-GPAGEPMGPEAGSKAELPPTVSRP 378
+ G Q G G P D +GP G GP G +GP+ PP + P
Sbjct: 489 DTGAQ----GLPGPPGEDGERGDDGEIGPRGLPGESGPRGL-LGPKG------PPGIPGP 537
Query: 379 PLLRGLSWDSGPE-------EPGP 395
P +RG+ GP+ EPGP
Sbjct: 538 PGVRGMDGPQGPKGSLGPQGEPGP 561
Score = 41.2 bits (95), Expect = 0.004
Identities = 64/228 (28%), Positives = 82/228 (35%), Gaps = 57/228 (25%)
Query: 207 PPGLDVCSGPPSPLP--GAPPQKGDEADVSSPH-PGEPNV--PKGLADRKQNDQRKVSQG 261
P G D GPP + G P +KG+ + SP GEP V P+G K + G
Sbjct: 1104 PNGADGPQGPPGGVGNLGPPGEKGEPGESGSPGIQGEPGVKGPRGERGEKGESGQPGEPG 1163
Query: 262 RLAPRPPPVEKSKEIAIEQKENFDPLQYP-------ETTPKGLAPVTN------------ 302
P+ P + K N P+ +P E P+G
Sbjct: 1164 PPGPKGPTGDDGP------KGNPGPVGFPGDPGPPGEGGPRGQDGAKGDRGEDGEPGQPG 1217
Query: 303 SSGKMALNSPQPGPVESELGKQ--LLKTGWEGSPLPRSPTQDAAGVGPPASQG----RGP 356
S G N P PGP LGK+ G EG + D +G P G GP
Sbjct: 1218 SPGPTGENGP-PGP----LGKRGPAGSPGSEGRQGGKGAKGDPGAIGAPGKTGPVGPAGP 1272
Query: 357 AGEPMGPEA-----GSKAEL----------PPTVSRPPLLRGLSWDSG 389
AG+P GP+ GS + PP PP L GL D+G
Sbjct: 1273 AGKP-GPDGLRGLPGSVGQQGRPGATGQAGPPGPVGPPGLPGLRGDAG 1319
Score = 40.4 bits (93), Expect = 0.007
Identities = 51/198 (25%), Positives = 71/198 (35%), Gaps = 28/198 (14%)
Query: 207 PPGLDVCSGPPSP-----LPGAPPQKGDEA-DVSSPHPGEPNV--PKGLADRKQNDQRKV 258
P G GPP P LPG P Q+G+ + PG P V P+G A +
Sbjct: 798 PNGFPGPKGPPGPPGKDGLPGHPGQRGEVGFQGKTGPPGPPGVVGPQGAAGETGPMGERG 857
Query: 259 SQGRLAPRPPPVEKSKEIAIEQKENFDPLQYPETTPKGLAPVTNSSGKMALNSPQPGPVE 318
G P PP + A ++ DP G A + G+ L GP
Sbjct: 858 HPG--PPGPPGEQGLPGTAGKEGTKGDPGPPGAPGKDGPAGLRGFPGERGLPGTAGGP-- 913
Query: 319 SELGKQLLKTGWEGSPLPRSPTQDAAGVGPPASQGRGPAGEPMGPEAGSKAELPPTVSRP 378
G +G+ P P A G P +G +G P+GP + PP +
Sbjct: 914 ----------GLKGNEGPSGPPGPA---GSPGERGAAGSGGPIGPPGRPGPQGPPGAAGE 960
Query: 379 PLLRGLSWDSGPEEPGPR 396
+G+ + GP P R
Sbjct: 961 ---KGVPGEKGPIGPTGR 975
Score = 34.3 bits (77), Expect = 0.54
Identities = 65/253 (25%), Positives = 82/253 (32%), Gaps = 57/253 (22%)
Query: 153 ALLEEAKLVSERFLTRRGRKSRSSPGDSPSAVSPNLSPSASPTSSRSNSLTVPTPPGLDV 212
A+L++A+L G R P P SP L S L P G
Sbjct: 390 AILQQARLALRGPPGPMGYTGRPGPLGQPG--SPGLK-------GESGDLGPQGPRGPQG 440
Query: 213 CSGPPSP--------------LPGAPPQKGDEADVSSPH-PGEPNV-----PKGLADRKQ 252
+GPP +PG P KGD P PGE +GL
Sbjct: 441 LTGPPGKAGRRGRAGADGARGMPGDPGVKGDRGFDGLPGLPGEKGHRGDTGAQGLPGPPG 500
Query: 253 NDQRKVSQGRLAPRPPPVEKSKEIAIEQKENFDPLQYPETTPKGLAPVTNSSGKMALNSP 312
D + G + PR P E + K P P P G+ + G P
Sbjct: 501 EDGERGDDGEIGPRGLPGESGPRGLLGPK---GPPGIPG--PPGVRGMDGPQGPKGSLGP 555
Query: 313 Q--PGPV--ESELGKQLL-----------------KTGWEGSPLPRSPTQDAAGVGPPAS 351
Q PGP + G Q L K G G P P GPP +
Sbjct: 556 QGEPGPPGQQGTPGTQGLPGPQGAIGPHGEKGPQGKPGLPGMPGSDGPPGHPGKEGPPGT 615
Query: 352 QG-RGPAGEPMGP 363
+G +GP+G P GP
Sbjct: 616 KGNQGPSG-PQGP 627
>gi|111118968 collagen, type XI, alpha 2 isoform 3 preproprotein [Homo
sapiens]
Length = 1629
Score = 52.0 bits (123), Expect = 2e-06
Identities = 74/276 (26%), Positives = 95/276 (34%), Gaps = 49/276 (17%)
Query: 169 RGRKSRSSPGDSPSAVSPNLSPSASPTSSRSNS------LTVPTPPGLDVCSGPPSP--- 219
+G K P P + P P A+ + G +GPP P
Sbjct: 991 KGNKGEHGPPGPPGPIGPVGQPGAAGADGEPGARGPQGHFGAKGDEGTRGFNGPPGPIGL 1050
Query: 220 --LPGAPPQKGDEADVSSPHPGEPNVPKGLADRKQNDQRKVSQGRLAPRPPPVEKSKEIA 277
LPG +KG+ DV P P P+G A D + G + PP EK
Sbjct: 1051 QGLPGPSGEKGETGDVGPMGPPGPPGPRGPAGPNGADGPQGPPGGVGNLGPPGEKG---- 1106
Query: 278 IEQKENFDPLQYPETTPKGLAPVTNSSGKMALNSPQPGPVESELGKQLLKTGWEGSPLPR 337
E E+ P E KG G+ S QPG G P P+
Sbjct: 1107 -EPGESGSPGIQGEPGVKGPRGERGEKGE----SGQPGE--------------PGPPGPK 1147
Query: 338 SPTQDAAGVGPPASQG----RGPAGE--PMGPEAGSKAELPPTVSRPPLLRGLSWDSGPE 391
PT D G P G GP GE P G + P G + ++GP
Sbjct: 1148 GPTGDDGPKGNPGPVGFPGDPGPPGEGGPRGQDGAKGDRGEDGEPGQPGSPGPTGENGP- 1206
Query: 392 EPGPRLQKVLAKLPLAEEEKRFAGKAGGKLAKA-PG 426
PGP ++ A P +E G+ GGK AK PG
Sbjct: 1207 -PGPLGKRGPAGSPGSE------GRQGGKGAKGDPG 1235
Score = 41.6 bits (96), Expect = 0.003
Identities = 54/204 (26%), Positives = 73/204 (35%), Gaps = 49/204 (24%)
Query: 202 LTVPTPPGLDVCSGPPSPL--PGAPPQKGDEADVSSPHPGEPNVPKGLADRKQNDQRKVS 259
L + PPG +G P PL PG+P KG+ D+ P P P+GL R+
Sbjct: 376 LALRGPPGPMGYTGRPGPLGQPGSPGLKGESGDLG---PQGPRGPQGLTGPPGKAGRRGR 432
Query: 260 QGRLAPRPPPVEKSKEIAIEQKENFDPLQYPETTPKGLAPVTNSSGKMALNSPQPGPVES 319
G R P + ++ FD GL + G
Sbjct: 433 AGADGARGMPGDPG----VKGDRGFD----------GLPGLPGEKGH-----------RG 467
Query: 320 ELGKQLLKTGWEGSPLPRSPTQDAAGVGPPASQGR-GPAGEPMGPEAGSKAELPPTVSRP 378
+ G Q G G P D +GP G GP G +GP+ PP + P
Sbjct: 468 DTGAQ----GLPGPPGEDGERGDDGEIGPRGLPGESGPRGL-LGPKG------PPGIPGP 516
Query: 379 PLLRGLSWDSGPE-------EPGP 395
P +RG+ GP+ EPGP
Sbjct: 517 PGVRGMDGPQGPKGSLGPQGEPGP 540
Score = 41.2 bits (95), Expect = 0.004
Identities = 64/228 (28%), Positives = 82/228 (35%), Gaps = 57/228 (25%)
Query: 207 PPGLDVCSGPPSPLP--GAPPQKGDEADVSSPH-PGEPNV--PKGLADRKQNDQRKVSQG 261
P G D GPP + G P +KG+ + SP GEP V P+G K + G
Sbjct: 1083 PNGADGPQGPPGGVGNLGPPGEKGEPGESGSPGIQGEPGVKGPRGERGEKGESGQPGEPG 1142
Query: 262 RLAPRPPPVEKSKEIAIEQKENFDPLQYP-------ETTPKGLAPVTN------------ 302
P+ P + K N P+ +P E P+G
Sbjct: 1143 PPGPKGPTGDDGP------KGNPGPVGFPGDPGPPGEGGPRGQDGAKGDRGEDGEPGQPG 1196
Query: 303 SSGKMALNSPQPGPVESELGKQ--LLKTGWEGSPLPRSPTQDAAGVGPPASQG----RGP 356
S G N P PGP LGK+ G EG + D +G P G GP
Sbjct: 1197 SPGPTGENGP-PGP----LGKRGPAGSPGSEGRQGGKGAKGDPGAIGAPGKTGPVGPAGP 1251
Query: 357 AGEPMGPEA-----GSKAEL----------PPTVSRPPLLRGLSWDSG 389
AG+P GP+ GS + PP PP L GL D+G
Sbjct: 1252 AGKP-GPDGLRGLPGSVGQQGRPGATGQAGPPGPVGPPGLPGLRGDAG 1298
Score = 40.4 bits (93), Expect = 0.007
Identities = 51/198 (25%), Positives = 71/198 (35%), Gaps = 28/198 (14%)
Query: 207 PPGLDVCSGPPSP-----LPGAPPQKGDEA-DVSSPHPGEPNV--PKGLADRKQNDQRKV 258
P G GPP P LPG P Q+G+ + PG P V P+G A +
Sbjct: 777 PNGFPGPKGPPGPPGKDGLPGHPGQRGEVGFQGKTGPPGPPGVVGPQGAAGETGPMGERG 836
Query: 259 SQGRLAPRPPPVEKSKEIAIEQKENFDPLQYPETTPKGLAPVTNSSGKMALNSPQPGPVE 318
G P PP + A ++ DP G A + G+ L GP
Sbjct: 837 HPG--PPGPPGEQGLPGTAGKEGTKGDPGPPGAPGKDGPAGLRGFPGERGLPGTAGGP-- 892
Query: 319 SELGKQLLKTGWEGSPLPRSPTQDAAGVGPPASQGRGPAGEPMGPEAGSKAELPPTVSRP 378
G +G+ P P A G P +G +G P+GP + PP +
Sbjct: 893 ----------GLKGNEGPSGPPGPA---GSPGERGAAGSGGPIGPPGRPGPQGPPGAAGE 939
Query: 379 PLLRGLSWDSGPEEPGPR 396
+G+ + GP P R
Sbjct: 940 ---KGVPGEKGPIGPTGR 954
Score = 34.3 bits (77), Expect = 0.54
Identities = 65/253 (25%), Positives = 82/253 (32%), Gaps = 57/253 (22%)
Query: 153 ALLEEAKLVSERFLTRRGRKSRSSPGDSPSAVSPNLSPSASPTSSRSNSLTVPTPPGLDV 212
A+L++A+L G R P P SP L S L P G
Sbjct: 369 AILQQARLALRGPPGPMGYTGRPGPLGQPG--SPGLK-------GESGDLGPQGPRGPQG 419
Query: 213 CSGPPSP--------------LPGAPPQKGDEADVSSPH-PGEPNV-----PKGLADRKQ 252
+GPP +PG P KGD P PGE +GL
Sbjct: 420 LTGPPGKAGRRGRAGADGARGMPGDPGVKGDRGFDGLPGLPGEKGHRGDTGAQGLPGPPG 479
Query: 253 NDQRKVSQGRLAPRPPPVEKSKEIAIEQKENFDPLQYPETTPKGLAPVTNSSGKMALNSP 312
D + G + PR P E + K P P P G+ + G P
Sbjct: 480 EDGERGDDGEIGPRGLPGESGPRGLLGPK---GPPGIPG--PPGVRGMDGPQGPKGSLGP 534
Query: 313 Q--PGPV--ESELGKQLL-----------------KTGWEGSPLPRSPTQDAAGVGPPAS 351
Q PGP + G Q L K G G P P GPP +
Sbjct: 535 QGEPGPPGQQGTPGTQGLPGPQGAIGPHGEKGPQGKPGLPGMPGSDGPPGHPGKEGPPGT 594
Query: 352 QG-RGPAGEPMGP 363
+G +GP+G P GP
Sbjct: 595 KGNQGPSG-PQGP 606
>gi|111118970 collagen, type XI, alpha 2 isoform 1 preproprotein [Homo
sapiens]
Length = 1736
Score = 52.0 bits (123), Expect = 2e-06
Identities = 74/276 (26%), Positives = 95/276 (34%), Gaps = 49/276 (17%)
Query: 169 RGRKSRSSPGDSPSAVSPNLSPSASPTSSRSNS------LTVPTPPGLDVCSGPPSP--- 219
+G K P P + P P A+ + G +GPP P
Sbjct: 1098 KGNKGEHGPPGPPGPIGPVGQPGAAGADGEPGARGPQGHFGAKGDEGTRGFNGPPGPIGL 1157
Query: 220 --LPGAPPQKGDEADVSSPHPGEPNVPKGLADRKQNDQRKVSQGRLAPRPPPVEKSKEIA 277
LPG +KG+ DV P P P+G A D + G + PP EK
Sbjct: 1158 QGLPGPSGEKGETGDVGPMGPPGPPGPRGPAGPNGADGPQGPPGGVGNLGPPGEKG---- 1213
Query: 278 IEQKENFDPLQYPETTPKGLAPVTNSSGKMALNSPQPGPVESELGKQLLKTGWEGSPLPR 337
E E+ P E KG G+ S QPG G P P+
Sbjct: 1214 -EPGESGSPGIQGEPGVKGPRGERGEKGE----SGQPGE--------------PGPPGPK 1254
Query: 338 SPTQDAAGVGPPASQG----RGPAGE--PMGPEAGSKAELPPTVSRPPLLRGLSWDSGPE 391
PT D G P G GP GE P G + P G + ++GP
Sbjct: 1255 GPTGDDGPKGNPGPVGFPGDPGPPGEGGPRGQDGAKGDRGEDGEPGQPGSPGPTGENGP- 1313
Query: 392 EPGPRLQKVLAKLPLAEEEKRFAGKAGGKLAKA-PG 426
PGP ++ A P +E G+ GGK AK PG
Sbjct: 1314 -PGPLGKRGPAGSPGSE------GRQGGKGAKGDPG 1342
Score = 41.6 bits (96), Expect = 0.003
Identities = 54/204 (26%), Positives = 73/204 (35%), Gaps = 49/204 (24%)
Query: 202 LTVPTPPGLDVCSGPPSPL--PGAPPQKGDEADVSSPHPGEPNVPKGLADRKQNDQRKVS 259
L + PPG +G P PL PG+P KG+ D+ P P P+GL R+
Sbjct: 483 LALRGPPGPMGYTGRPGPLGQPGSPGLKGESGDLG---PQGPRGPQGLTGPPGKAGRRGR 539
Query: 260 QGRLAPRPPPVEKSKEIAIEQKENFDPLQYPETTPKGLAPVTNSSGKMALNSPQPGPVES 319
G R P + ++ FD GL + G
Sbjct: 540 AGADGARGMPGDPG----VKGDRGFD----------GLPGLPGEKGH-----------RG 574
Query: 320 ELGKQLLKTGWEGSPLPRSPTQDAAGVGPPASQGR-GPAGEPMGPEAGSKAELPPTVSRP 378
+ G Q G G P D +GP G GP G +GP+ PP + P
Sbjct: 575 DTGAQ----GLPGPPGEDGERGDDGEIGPRGLPGESGPRGL-LGPKG------PPGIPGP 623
Query: 379 PLLRGLSWDSGPE-------EPGP 395
P +RG+ GP+ EPGP
Sbjct: 624 PGVRGMDGPQGPKGSLGPQGEPGP 647
Score = 41.2 bits (95), Expect = 0.004
Identities = 64/228 (28%), Positives = 82/228 (35%), Gaps = 57/228 (25%)
Query: 207 PPGLDVCSGPPSPLP--GAPPQKGDEADVSSPH-PGEPNV--PKGLADRKQNDQRKVSQG 261
P G D GPP + G P +KG+ + SP GEP V P+G K + G
Sbjct: 1190 PNGADGPQGPPGGVGNLGPPGEKGEPGESGSPGIQGEPGVKGPRGERGEKGESGQPGEPG 1249
Query: 262 RLAPRPPPVEKSKEIAIEQKENFDPLQYP-------ETTPKGLAPVTN------------ 302
P+ P + K N P+ +P E P+G
Sbjct: 1250 PPGPKGPTGDDGP------KGNPGPVGFPGDPGPPGEGGPRGQDGAKGDRGEDGEPGQPG 1303
Query: 303 SSGKMALNSPQPGPVESELGKQ--LLKTGWEGSPLPRSPTQDAAGVGPPASQG----RGP 356
S G N P PGP LGK+ G EG + D +G P G GP
Sbjct: 1304 SPGPTGENGP-PGP----LGKRGPAGSPGSEGRQGGKGAKGDPGAIGAPGKTGPVGPAGP 1358
Query: 357 AGEPMGPEA-----GSKAEL----------PPTVSRPPLLRGLSWDSG 389
AG+P GP+ GS + PP PP L GL D+G
Sbjct: 1359 AGKP-GPDGLRGLPGSVGQQGRPGATGQAGPPGPVGPPGLPGLRGDAG 1405
Score = 40.4 bits (93), Expect = 0.007
Identities = 51/198 (25%), Positives = 71/198 (35%), Gaps = 28/198 (14%)
Query: 207 PPGLDVCSGPPSP-----LPGAPPQKGDEA-DVSSPHPGEPNV--PKGLADRKQNDQRKV 258
P G GPP P LPG P Q+G+ + PG P V P+G A +
Sbjct: 884 PNGFPGPKGPPGPPGKDGLPGHPGQRGEVGFQGKTGPPGPPGVVGPQGAAGETGPMGERG 943
Query: 259 SQGRLAPRPPPVEKSKEIAIEQKENFDPLQYPETTPKGLAPVTNSSGKMALNSPQPGPVE 318
G P PP + A ++ DP G A + G+ L GP
Sbjct: 944 HPG--PPGPPGEQGLPGTAGKEGTKGDPGPPGAPGKDGPAGLRGFPGERGLPGTAGGP-- 999
Query: 319 SELGKQLLKTGWEGSPLPRSPTQDAAGVGPPASQGRGPAGEPMGPEAGSKAELPPTVSRP 378
G +G+ P P A G P +G +G P+GP + PP +
Sbjct: 1000 ----------GLKGNEGPSGPPGPA---GSPGERGAAGSGGPIGPPGRPGPQGPPGAAGE 1046
Query: 379 PLLRGLSWDSGPEEPGPR 396
+G+ + GP P R
Sbjct: 1047 ---KGVPGEKGPIGPTGR 1061
Score = 35.8 bits (81), Expect = 0.18
Identities = 96/398 (24%), Positives = 130/398 (32%), Gaps = 89/398 (22%)
Query: 11 VSPACGAQASWSIFGADAAEVPGTRGHSQQEAAMPHIPEDEEPPGEPQAAQSPAGQ-GPP 69
+ PA A+ + S GA A G +G + A + E PPG + PAG GPP
Sbjct: 360 LGPALSAETAHS--GAAAHGPRGLKGEKGEPAVLEPGMLVEGPPGP----EGPAGLIGPP 413
Query: 70 TAGVSCSPTPTIVLTGDA--TSPEGETDKNLANRVHSPHKRLSHRHLKVSTASLTSVDPA 127
G+ +P P GD P G ++ P + +
Sbjct: 414 --GIQGNPGPV----GDPGERGPPGRAGLPGSDGAPGPPGTSLMLPFRFGSGG------- 460
Query: 128 GHIIDLVNDQLPDISISEEDKKKNLALLEEAKLVSERFLTRRGRKSRSSPGDSPSAVSPN 187
D+ P ++ E + A+L++A+L G R P P SP
Sbjct: 461 -------GDKGPVVAAQEAQAQ---AILQQARLALRGPPGPMGYTGRPGPLGQPG--SPG 508
Query: 188 LSPSASPTSSRSNSLTVPTPPGLDVCSGPPSP--------------LPGAPPQKGDEADV 233
L S L P G +GPP +PG P KGD
Sbjct: 509 LK-------GESGDLGPQGPRGPQGLTGPPGKAGRRGRAGADGARGMPGDPGVKGDRGFD 561
Query: 234 SSPH-PGEPNV-----PKGLADRKQNDQRKVSQGRLAPRPPPVEKSKEIAIEQKENFDPL 287
P PGE +GL D + G + PR P E + K P
Sbjct: 562 GLPGLPGEKGHRGDTGAQGLPGPPGEDGERGDDGEIGPRGLPGESGPRGLLGPK---GPP 618
Query: 288 QYPETTPKGLAPVTNSSGKMALNSPQ--PGPV--ESELGKQLL----------------- 326
P P G+ + G PQ PGP + G Q L
Sbjct: 619 GIPG--PPGVRGMDGPQGPKGSLGPQGEPGPPGQQGTPGTQGLPGPQGAIGPHGEKGPQG 676
Query: 327 KTGWEGSPLPRSPTQDAAGVGPPASQG-RGPAGEPMGP 363
K G G P P GPP ++G +GP+G P GP
Sbjct: 677 KPGLPGMPGSDGPPGHPGKEGPPGTKGNQGPSG-PQGP 713
>gi|44662807 hypothetical protein LOC388407 [Homo sapiens]
Length = 251
Score = 51.6 bits (122), Expect = 3e-06
Identities = 63/246 (25%), Positives = 85/246 (34%), Gaps = 41/246 (16%)
Query: 155 LEEAKLVSERFLTRRGRKSRSSPGDSPSAVSPNLSPSASPTSSRSNSLTVPTPPGLDVCS 214
L L E R G+ +SSP SPS L P T ++ S P+ P CS
Sbjct: 10 LRALDLYPEPAFLRSGKDPKSSPASSPSFAV--LGPEVRSTGGQAGSRRRPSAP----CS 63
Query: 215 GPPSPLPGAPPQKGDEADVSSPHPGEPNVPKGLAD------RKQNDQRKVSQGRLAPRPP 268
+ GAP G SP G P P G A R N G P
Sbjct: 64 QDRAAAEGAPALLG-----GSPSSGSPGHPPGSAFGVEAGCRALNVSEHARGGFALGLPF 118
Query: 269 PVEKSKEIAIEQKENFDPLQYPETTPKGLAPVTNSSGKMALNSPQPGPVESELGKQLLKT 328
+ + + DP PE AP++++ G+ S ++
Sbjct: 119 GLSGGAYLFLLLDGAGDPKPTPE------APISSADGRAWFPS---------------ES 157
Query: 329 GWEGSPLPRSPTQDAAGVGPPASQGRGPAGEPMGPEAGSKAELPPTVSRPPLLRGLSWDS 388
W+ LP+ P +G P A G GP P GP G+ + P L R D
Sbjct: 158 SWQ---LPQLPAGSTSGSEPRARPGLGPRQLPTGPRDGAAGQGPGRGLTARLGREREIDC 214
Query: 389 GPEEPG 394
GP + G
Sbjct: 215 GPRQAG 220
>gi|155030232 proline, glutamic acid and leucine rich protein 1
[Homo sapiens]
Length = 1130
Score = 51.2 bits (121), Expect = 4e-06
Identities = 41/146 (28%), Positives = 63/146 (43%), Gaps = 19/146 (13%)
Query: 702 GQTPSSSSIPSLPALSESPNGKGSLP------------VTSALPALLENGKTNGD--PDC 747
G +S +P+ E P G LP VT P L+ G G P
Sbjct: 815 GPPTASPPVPAKEEPEELPAAPGPLPPPPPPPPPVPGPVTLPPPQLVPEGTPGGGGPPAL 874
Query: 748 EASAPALTLSCLEELSQETKARMEEEAYSKGFQEGLKKTKE-----LQDLKEEEEEQKSE 802
E + ++ +E +E + EEE + +E ++ +E ++ +EEEEE + E
Sbjct: 875 EEDLTVININSSDEEEEEEEEEEEEEEEEEEEEEDFEEEEEDEEEYFEEEEEEEEEFEEE 934
Query: 803 SPEEPEEVEETEEEEKGPRSSKLEEL 828
EE E+EE EEEE +LEE+
Sbjct: 935 FEEEEGELEEEEEEEDEEEEEELEEV 960
Score = 37.7 bits (86), Expect = 0.049
Identities = 24/57 (42%), Positives = 33/57 (57%), Gaps = 9/57 (15%)
Query: 771 EEEAYSKGFQEGLKKTKELQDLKEEEEEQKSESPEEPEEVEETEEEEKGPRSSKLEE 827
EEE + + F+E E +L+EEEEE E EE EE+EE E+ E G ++EE
Sbjct: 927 EEEEFEEEFEE------EEGELEEEEEE---EDEEEEEELEEVEDLEFGTAGGEVEE 974
Score = 35.8 bits (81), Expect = 0.18
Identities = 18/49 (36%), Positives = 29/49 (59%)
Query: 783 LKKTKELQDLKEEEEEQKSESPEEPEEVEETEEEEKGPRSSKLEELVHF 831
+ + E ++ +EEEEE++ E EE E+ EE EE+E+ + EE F
Sbjct: 883 INSSDEEEEEEEEEEEEEEEEEEEEEDFEEEEEDEEEYFEEEEEEEEEF 931
Score = 35.0 bits (79), Expect = 0.32
Identities = 57/227 (25%), Positives = 71/227 (31%), Gaps = 43/227 (18%)
Query: 176 SPGDSPSAVSPNLSPSASPTSSRSNSLTVPTPPGLDVCSGPPSPLPGAPPQKGDEADVSS 235
+P P A SP +P P P P + S P P G P G V S
Sbjct: 649 APVPPPEAPSPFRAPPFHPPG--------PMPSVGSMPSAGPMPSAGPMPSAGP---VPS 697
Query: 236 PHPGEPNVPKGLADRKQNDQRKVSQGRLAPRPPPVEKSKEIAIEQKENFDPLQYPETTPK 295
PG P L +S L PP + E N DP+ P TP
Sbjct: 698 ARPGPPTTANHLG---------LSVPGLVSVPPRLLPGPENH-RAGSNEDPILAPSGTPP 747
Query: 296 GLAPVTNSSGKMALNSPQPGPV--------------ESELGKQLLKTGWEGSPLPRSPTQ 341
P + G P+P V ES+ ++ PLP P
Sbjct: 748 PTIPPDETFGGRV---PRPAFVHYDKEEASDVEISLESDSDDSVVIVPEGLPPLPPPPPS 804
Query: 342 DA-----AGVGPPASQGRGPAGEPMGPEAGSKAELPPTVSRPPLLRG 383
A A GPP + PA E + LPP PP + G
Sbjct: 805 GATPPPIAPTGPPTASPPVPAKEEPEELPAAPGPLPPPPPPPPPVPG 851
>gi|41349484 proline-rich protein BstNI subfamily 1 isoform 2
preproprotein [Homo sapiens]
Length = 198
Score = 51.2 bits (121), Expect = 4e-06
Identities = 53/202 (26%), Positives = 75/202 (37%), Gaps = 21/202 (10%)
Query: 180 SPSAVSPNLSPSASPTSSRSNSLTVPTPPGLDVCSGPPSP--LPGAPPQKGDEADVSSPH 237
S ++ ++S SP+ N P+P G + GPP P P PP +G P
Sbjct: 15 SAQNLNEDVSQEESPSLIAGNPQG-PSPQGGNKPQGPPPPPGKPQGPPPQGGNKPQGPPP 73
Query: 238 PGEPNVPKGLADRKQNDQRKVSQGRLAPRPPPVEKSKEIAIEQKENFDPLQYPETTPKGL 297
PG+P P D+ ++ + + P+ PP + K P P+G
Sbjct: 74 PGKPQGPPPQGDKSRSPRSPPGK----PQGPPPQGGKPQG--------PPPQGGNKPQGP 121
Query: 298 APVTNSSGKMALNSPQPGPVESELGKQLLKTGWEGSPLPRSPTQDAAGVGPPASQGRGPA 357
P G A + S GK EG+ P+ P A G P PA
Sbjct: 122 PPPGKPQGPPAQGGSKSQSARSPPGKPQGPPQQEGNN-PQGPPPPAG--GNPQQPQAPPA 178
Query: 358 GEPMGPEAGSKAELPPTVSRPP 379
G+P GP + P SRPP
Sbjct: 179 GQPQGPPRPPQGGRP---SRPP 197
Score = 35.0 bits (79), Expect = 0.32
Identities = 29/119 (24%), Positives = 39/119 (32%), Gaps = 4/119 (3%)
Query: 178 GDSPSAVSPNLSPSASPTSSRSNSLTVPTPPGLDVCSGPPSPLPGAPPQKGDEADVSSPH 237
G+ P P P P S + +PPG P P PP +G P
Sbjct: 65 GNKPQGPPPPGKPQGPPPQG-DKSRSPRSPPGKPQGPPPQGGKPQGPPPQGGNKPQGPPP 123
Query: 238 PGEPNVPKGLADRKQNDQRKVSQGRLAPRPPPVEKSKEIAIEQKENFDPLQYPETTPKG 296
PG+P P K R G+ P+ PP ++ Q P+ P G
Sbjct: 124 PGKPQGPPAQGGSKSQSARS-PPGK--PQGPPQQEGNNPQGPPPPAGGNPQQPQAPPAG 179
Score = 32.7 bits (73), Expect = 1.6
Identities = 32/117 (27%), Positives = 38/117 (32%), Gaps = 19/117 (16%)
Query: 169 RGRKSRS--SPGDSPSAVSPNLSPSASPTSSRSNSLTVPTPPGLDVCSGPPSP------- 219
+G KSRS SP P P P N P PPG GPP+
Sbjct: 83 QGDKSRSPRSPPGKPQGPPPQGGKPQGPPPQGGNKPQGPPPPGKP--QGPPAQGGSKSQS 140
Query: 220 ------LPGAPPQKGDEADVSSPHP--GEPNVPKGLADRKQNDQRKVSQGRLAPRPP 268
P PPQ+ P P G P P+ + + QG RPP
Sbjct: 141 ARSPPGKPQGPPQQEGNNPQGPPPPAGGNPQQPQAPPAGQPQGPPRPPQGGRPSRPP 197
Score = 31.6 bits (70), Expect = 3.5
Identities = 54/219 (24%), Positives = 73/219 (33%), Gaps = 60/219 (27%)
Query: 217 PSPLPGAP----PQKGDEADVSSPHPGEPNVPKGLADRKQNDQRKVSQGRLAPRPPPVEK 272
PS + G P PQ G++ P PG+P P QG P+ PP
Sbjct: 29 PSLIAGNPQGPSPQGGNKPQGPPPPPGKPQGPP-------------PQGGNKPQGPP--- 72
Query: 273 SKEIAIEQKENFDPLQYPETTPKGLAPVTNSSGKMALNSPQPGPVESELGKQLLKTGWEG 332
P P+G P + S SP+ P GK +G
Sbjct: 73 -----------------PPGKPQGPPPQGDKS-----RSPRSPP-----GKP------QG 99
Query: 333 SPLPRSPTQDAAGVGPPASQGRGPAGEPMGPEA--GSKAEL----PPTVSRPPLLRGLSW 386
P Q G QG P G+P GP A GSK++ P PP G +
Sbjct: 100 PPPQGGKPQGPPPQGGNKPQGPPPPGKPQGPPAQGGSKSQSARSPPGKPQGPPQQEGNNP 159
Query: 387 DSGPEEPGPRLQKVLAKLPLAEEEKRFAGKAGGKLAKAP 425
P G Q+ A P + + GG+ ++ P
Sbjct: 160 QGPPPPAGGNPQQPQAP-PAGQPQGPPRPPQGGRPSRPP 197
>gi|111118976 collagen, type II, alpha 1 isoform 1 precursor [Homo
sapiens]
Length = 1487
Score = 50.8 bits (120), Expect = 6e-06
Identities = 58/195 (29%), Positives = 75/195 (38%), Gaps = 12/195 (6%)
Query: 208 PGLDVCSGPPSPL--PGAPPQKGDEADVSSPHPGEPNVPKGLADRKQNDQRKVSQGRLAP 265
PG GPP P+ PG G+ SP P G A K + + G AP
Sbjct: 1010 PGASGDRGPPGPVGPPGLTGPAGEPGREGSPGADGPPGRDGAAGVKGDRGETGAVG--AP 1067
Query: 266 RPPPVEKSKEIAIEQKENFDPLQYPETTPKGLAPVTNSSGKMALNSPQPGPVES-ELGKQ 324
P S A + D + P G + + G P+ E+ E G++
Sbjct: 1068 GAPGPPGSPGPAGPTGKQGDRGEAGAQGPMGPSGPAGARGIQGPQGPRGDKGEAGEPGER 1127
Query: 325 LLK-----TGWEGSPLPRSPTQDAAGVGPPASQG-RGPAGEPMGPEAGSKAELPPTVSRP 378
LK TG +G P P P+ D GP G RGP G P+GP A P P
Sbjct: 1128 GLKGHRGFTGLQGLPGPPGPSGDQGASGPAGPSGPRGPPG-PVGPSGKDGANGIPGPIGP 1186
Query: 379 PLLRGLSWDSGPEEP 393
P RG S ++GP P
Sbjct: 1187 PGPRGRSGETGPAGP 1201
Score = 46.6 bits (109), Expect = 1e-04
Identities = 61/238 (25%), Positives = 84/238 (35%), Gaps = 20/238 (8%)
Query: 168 RRGRKSRSSPGDSPSAVSPNLSPSASPTSSRSNSLTVPTPPGLDVCSGPPSPLPGAPPQK 227
++G S P V P + R S PPG D +G +
Sbjct: 1006 KQGAPGASGDRGPPGPVGPPGLTGPAGEPGREGSPGADGPPGRDGAAGVKG-------DR 1058
Query: 228 GDEADVSSPH-PGEPNVPKGLADR-KQNDQRKV-SQGRLAPRPPPVEKSKEIAIEQKENF 284
G+ V +P PG P P KQ D+ + +QG + P P ++ I Q
Sbjct: 1059 GETGAVGAPGAPGPPGSPGPAGPTGKQGDRGEAGAQGPMGPSGPA--GARGIQGPQGPRG 1116
Query: 285 DPLQYPETTPKGLAPVTNSSGKMALNSPQPGPVESE-LGKQLLKTGWEGSPLPRSPT-QD 342
D + E +GL +G L P PGP + +G G P P P+ +D
Sbjct: 1117 DKGEAGEPGERGLKGHRGFTGLQGLPGP-PGPSGDQGASGPAGPSGPRGPPGPVGPSGKD 1175
Query: 343 AAG-----VGPPASQGRGPAGEPMGPEAGSKAELPPTVSRPPLLRGLSWDSGPEEPGP 395
A +GPP +GR P GP PP P + GP E GP
Sbjct: 1176 GANGIPGPIGPPGPRGRSGETGPAGPPGNPGPPGPPGPPGPGIDMSAFAGLGPREKGP 1233
Score = 43.9 bits (102), Expect = 7e-04
Identities = 67/244 (27%), Positives = 84/244 (34%), Gaps = 36/244 (14%)
Query: 169 RGRKSRSSPGDSPSAVSPNLSPSASPTSSRSNSLTVPTPPGLDVCSGPPSP--LPGA--- 223
+G + + A P PS +P +T P G GPP PGA
Sbjct: 848 KGEQGEAGQKGDAGAPGPQ-GPSGAPGPQGPTGVT--GPKGARGAQGPPGATGFPGAAGR 904
Query: 224 ---PPQKGDEADVSSPHPGEPNVPKGLADRKQNDQRKVSQGRLAPRPPPVEKSKEIAIEQ 280
P G+ P P + PKG R G P PP EK E
Sbjct: 905 VGPPGSNGNPGPPGPPGPSGKDGPKGARGDSGPPGRAGEPGLQGPAGPPGEKG-----EP 959
Query: 281 KENFDPLQYPETTPKGLAPVTNSSGKMALNSPQ-----PGPVESELGKQLLKTGWEGSPL 335
++ P+GLA G + PGP E GKQ G G+
Sbjct: 960 GDDGPSGAEGPPGPQGLAGQRGIVGLPGQRGERGFPGLPGP-SGEPGKQ----GAPGASG 1014
Query: 336 PRSPTQDAAGVGPPASQGRGPAGEPMGPEAGSKAELPPTVSRPPLLRGLSWDSG----PE 391
R P VGPP GPAGEP G E A+ PP ++G ++G P
Sbjct: 1015 DRGP---PGPVGPPGL--TGPAGEP-GREGSPGADGPPGRDGAAGVKGDRGETGAVGAPG 1068
Query: 392 EPGP 395
PGP
Sbjct: 1069 APGP 1072
Score = 39.3 bits (90), Expect = 0.017
Identities = 65/259 (25%), Positives = 87/259 (33%), Gaps = 52/259 (20%)
Query: 177 PGDSPSAVSPNLSPSASPTSSRSNSLTVPTPPGLDVCSGPPSPL-----PGAPPQKGDEA 231
PG SA +P ++ + R PPG +GP P PG KG++
Sbjct: 416 PGAKGSAGAPGIAGAPGFPGPRG-------PPGPQGATGPLGPKGQTGEPGIAGFKGEQG 468
Query: 232 DVSSPHPGEPNVPKGLADRKQNDQRKVSQGRLAPRPPPVEKSKEIAIEQKENFDPLQYPE 291
P P P G A + + G + P PP E
Sbjct: 469 PKGEPGPAGPQGAPGPAGEEGKRGARGEPGGVGPIGPPGE-------------------- 508
Query: 292 TTPKGLAPVTNSSGKMALNSPQPGPVESELGKQLLKTGWEGSPLPRSPTQDAAGVGPPAS 351
+G G+ L P+ P E G G P+ D G P
Sbjct: 509 ---RGAPGNRGFPGQDGLAGPKGAPGE---------RGPSGLAGPKGANGDPGRPGEPGL 556
Query: 352 QG-RGPAGEPMGPEAGSKAELPPTVSRPPLLRGLSWDSGPEEPGPRLQKVLAKLPLAEEE 410
G RG G P +AG + ++ P S P G GP+ G R Q + P +
Sbjct: 557 PGARGLTGRP--GDAGPQGKVGP--SGAPGEDGRPGPPGPQ--GARGQPGVMGFPGPKGA 610
Query: 411 KRFAGKAGGK-LAKAPGLK 428
GKAG K L APGL+
Sbjct: 611 NGEPGKAGEKGLPGAPGLR 629
Score = 38.1 bits (87), Expect = 0.037
Identities = 64/249 (25%), Positives = 82/249 (32%), Gaps = 37/249 (14%)
Query: 174 RSSPGDSPSAVSPNLSPSASPTSSRSNSLTVPTPPGLDVCSGPPSPLPGAPPQKGDEADV 233
R PG + A P R P P G GPP P PG + GD+
Sbjct: 629 RGLPGKDGETGAAGPPGPAGPAGERGEQ-GAPGPSGFQGLPGPPGP-PGEGGKPGDQGV- 685
Query: 234 SSPHPGEPNVPKGLADRKQND-----QRKVSQGRLAPRPPPVEKSKEIAIEQKENFDPLQ 288
PGE P + R + +QG PR P + K P
Sbjct: 686 ----PGEAGAPGLVGPRGERGFPGERGSPGAQGLQGPRGLPGTPGTD---GPKGASGPAG 738
Query: 289 YPETT-PKGLAPVTNSSGKMALNSP--------QPGPVESELGKQLLK--TGWEGSPLPR 337
P P GL + G + P + GP E GK + TG G P P
Sbjct: 739 PPGAQGPPGLQGMPGERGAAGIAGPKGDRGDVGEKGP-EGAPGKDGGRGLTGPIGPPGPA 797
Query: 338 SPTQDAAGVGPPASQG----RGPAGE--PMGPEAGSKAELPPTVSRPPLLRGLSWDSGPE 391
+ VGPP G RG GE GP + PP P +G ++G +
Sbjct: 798 GANGEKGEVGPPGPAGSAGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQK 857
Query: 392 ----EPGPR 396
PGP+
Sbjct: 858 GDAGAPGPQ 866
Score = 33.1 bits (74), Expect = 1.2
Identities = 50/224 (22%), Positives = 65/224 (29%), Gaps = 77/224 (34%)
Query: 205 PTPPGLDVCSGPPSPLPGAPPQKGDEADVSSP----------------HPGEPNVP---- 244
P PG+ GP P PG P + GD+ + P PG P +P
Sbjct: 230 PGEPGVSGPMGPRGP-PGPPGKPGDDGEAGKPGKAGERGPPGPQGARGFPGTPGLPGVKG 288
Query: 245 ----------------KGLADRKQNDQRKVSQGRLAPRPPPVEKSKEIAIEQKENFDPLQ 288
G+ + S G + PR P E+ +
Sbjct: 289 HRGYPGLDGAKGEAGAPGVKGESGSPGENGSPGPMGPRGLPGERGR-------------- 334
Query: 289 YPETTPKGLAPVTNSSGKMALNSPQPGPVESELGKQLLKTGWEGSPLPRSPTQDAAGVGP 348
T P G A + G QPGP G P P P G
Sbjct: 335 ---TGPAGAAGARGNDG-------QPGPA--------------GPPGPVGPAGGPGFPGA 370
Query: 349 PASQGR-GPAGEPMGPEAGSKAELPPTVSRPPLLRGLSWDSGPE 391
P ++G GP G GPE P P G S + G +
Sbjct: 371 PGAKGEAGPTG-ARGPEGAQGPRGEPGTPGSPGPAGASGNPGTD 413
>gi|111118974 collagen, type II, alpha 1 isoform 2 precursor [Homo
sapiens]
Length = 1418
Score = 50.8 bits (120), Expect = 6e-06
Identities = 58/195 (29%), Positives = 75/195 (38%), Gaps = 12/195 (6%)
Query: 208 PGLDVCSGPPSPL--PGAPPQKGDEADVSSPHPGEPNVPKGLADRKQNDQRKVSQGRLAP 265
PG GPP P+ PG G+ SP P G A K + + G AP
Sbjct: 941 PGASGDRGPPGPVGPPGLTGPAGEPGREGSPGADGPPGRDGAAGVKGDRGETGAVG--AP 998
Query: 266 RPPPVEKSKEIAIEQKENFDPLQYPETTPKGLAPVTNSSGKMALNSPQPGPVES-ELGKQ 324
P S A + D + P G + + G P+ E+ E G++
Sbjct: 999 GAPGPPGSPGPAGPTGKQGDRGEAGAQGPMGPSGPAGARGIQGPQGPRGDKGEAGEPGER 1058
Query: 325 LLK-----TGWEGSPLPRSPTQDAAGVGPPASQG-RGPAGEPMGPEAGSKAELPPTVSRP 378
LK TG +G P P P+ D GP G RGP G P+GP A P P
Sbjct: 1059 GLKGHRGFTGLQGLPGPPGPSGDQGASGPAGPSGPRGPPG-PVGPSGKDGANGIPGPIGP 1117
Query: 379 PLLRGLSWDSGPEEP 393
P RG S ++GP P
Sbjct: 1118 PGPRGRSGETGPAGP 1132
Score = 46.6 bits (109), Expect = 1e-04
Identities = 61/238 (25%), Positives = 84/238 (35%), Gaps = 20/238 (8%)
Query: 168 RRGRKSRSSPGDSPSAVSPNLSPSASPTSSRSNSLTVPTPPGLDVCSGPPSPLPGAPPQK 227
++G S P V P + R S PPG D +G +
Sbjct: 937 KQGAPGASGDRGPPGPVGPPGLTGPAGEPGREGSPGADGPPGRDGAAGVKG-------DR 989
Query: 228 GDEADVSSPH-PGEPNVPKGLADR-KQNDQRKV-SQGRLAPRPPPVEKSKEIAIEQKENF 284
G+ V +P PG P P KQ D+ + +QG + P P ++ I Q
Sbjct: 990 GETGAVGAPGAPGPPGSPGPAGPTGKQGDRGEAGAQGPMGPSGPA--GARGIQGPQGPRG 1047
Query: 285 DPLQYPETTPKGLAPVTNSSGKMALNSPQPGPVESE-LGKQLLKTGWEGSPLPRSPT-QD 342
D + E +GL +G L P PGP + +G G P P P+ +D
Sbjct: 1048 DKGEAGEPGERGLKGHRGFTGLQGLPGP-PGPSGDQGASGPAGPSGPRGPPGPVGPSGKD 1106
Query: 343 AAG-----VGPPASQGRGPAGEPMGPEAGSKAELPPTVSRPPLLRGLSWDSGPEEPGP 395
A +GPP +GR P GP PP P + GP E GP
Sbjct: 1107 GANGIPGPIGPPGPRGRSGETGPAGPPGNPGPPGPPGPPGPGIDMSAFAGLGPREKGP 1164
Score = 43.9 bits (102), Expect = 7e-04
Identities = 67/244 (27%), Positives = 84/244 (34%), Gaps = 36/244 (14%)
Query: 169 RGRKSRSSPGDSPSAVSPNLSPSASPTSSRSNSLTVPTPPGLDVCSGPPSP--LPGA--- 223
+G + + A P PS +P +T P G GPP PGA
Sbjct: 779 KGEQGEAGQKGDAGAPGPQ-GPSGAPGPQGPTGVT--GPKGARGAQGPPGATGFPGAAGR 835
Query: 224 ---PPQKGDEADVSSPHPGEPNVPKGLADRKQNDQRKVSQGRLAPRPPPVEKSKEIAIEQ 280
P G+ P P + PKG R G P PP EK E
Sbjct: 836 VGPPGSNGNPGPPGPPGPSGKDGPKGARGDSGPPGRAGEPGLQGPAGPPGEKG-----EP 890
Query: 281 KENFDPLQYPETTPKGLAPVTNSSGKMALNSPQ-----PGPVESELGKQLLKTGWEGSPL 335
++ P+GLA G + PGP E GKQ G G+
Sbjct: 891 GDDGPSGAEGPPGPQGLAGQRGIVGLPGQRGERGFPGLPGP-SGEPGKQ----GAPGASG 945
Query: 336 PRSPTQDAAGVGPPASQGRGPAGEPMGPEAGSKAELPPTVSRPPLLRGLSWDSG----PE 391
R P VGPP GPAGEP G E A+ PP ++G ++G P
Sbjct: 946 DRGP---PGPVGPPGL--TGPAGEP-GREGSPGADGPPGRDGAAGVKGDRGETGAVGAPG 999
Query: 392 EPGP 395
PGP
Sbjct: 1000 APGP 1003
Score = 39.3 bits (90), Expect = 0.017
Identities = 65/259 (25%), Positives = 87/259 (33%), Gaps = 52/259 (20%)
Query: 177 PGDSPSAVSPNLSPSASPTSSRSNSLTVPTPPGLDVCSGPPSPL-----PGAPPQKGDEA 231
PG SA +P ++ + R PPG +GP P PG KG++
Sbjct: 347 PGAKGSAGAPGIAGAPGFPGPRG-------PPGPQGATGPLGPKGQTGEPGIAGFKGEQG 399
Query: 232 DVSSPHPGEPNVPKGLADRKQNDQRKVSQGRLAPRPPPVEKSKEIAIEQKENFDPLQYPE 291
P P P G A + + G + P PP E
Sbjct: 400 PKGEPGPAGPQGAPGPAGEEGKRGARGEPGGVGPIGPPGE-------------------- 439
Query: 292 TTPKGLAPVTNSSGKMALNSPQPGPVESELGKQLLKTGWEGSPLPRSPTQDAAGVGPPAS 351
+G G+ L P+ P E G G P+ D G P
Sbjct: 440 ---RGAPGNRGFPGQDGLAGPKGAPGE---------RGPSGLAGPKGANGDPGRPGEPGL 487
Query: 352 QG-RGPAGEPMGPEAGSKAELPPTVSRPPLLRGLSWDSGPEEPGPRLQKVLAKLPLAEEE 410
G RG G P +AG + ++ P S P G GP+ G R Q + P +
Sbjct: 488 PGARGLTGRP--GDAGPQGKVGP--SGAPGEDGRPGPPGPQ--GARGQPGVMGFPGPKGA 541
Query: 411 KRFAGKAGGK-LAKAPGLK 428
GKAG K L APGL+
Sbjct: 542 NGEPGKAGEKGLPGAPGLR 560
Score = 38.1 bits (87), Expect = 0.037
Identities = 64/249 (25%), Positives = 82/249 (32%), Gaps = 37/249 (14%)
Query: 174 RSSPGDSPSAVSPNLSPSASPTSSRSNSLTVPTPPGLDVCSGPPSPLPGAPPQKGDEADV 233
R PG + A P R P P G GPP P PG + GD+
Sbjct: 560 RGLPGKDGETGAAGPPGPAGPAGERGEQ-GAPGPSGFQGLPGPPGP-PGEGGKPGDQGV- 616
Query: 234 SSPHPGEPNVPKGLADRKQND-----QRKVSQGRLAPRPPPVEKSKEIAIEQKENFDPLQ 288
PGE P + R + +QG PR P + K P
Sbjct: 617 ----PGEAGAPGLVGPRGERGFPGERGSPGAQGLQGPRGLPGTPGTD---GPKGASGPAG 669
Query: 289 YPETT-PKGLAPVTNSSGKMALNSP--------QPGPVESELGKQLLK--TGWEGSPLPR 337
P P GL + G + P + GP E GK + TG G P P
Sbjct: 670 PPGAQGPPGLQGMPGERGAAGIAGPKGDRGDVGEKGP-EGAPGKDGGRGLTGPIGPPGPA 728
Query: 338 SPTQDAAGVGPPASQG----RGPAGE--PMGPEAGSKAELPPTVSRPPLLRGLSWDSGPE 391
+ VGPP G RG GE GP + PP P +G ++G +
Sbjct: 729 GANGEKGEVGPPGPAGSAGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQK 788
Query: 392 ----EPGPR 396
PGP+
Sbjct: 789 GDAGAPGPQ 797
Score = 33.1 bits (74), Expect = 1.2
Identities = 63/227 (27%), Positives = 82/227 (36%), Gaps = 21/227 (9%)
Query: 213 CSGPPSPLPGAPPQKGDEADVSS-PHPGEPNVPKGLADRKQNDQRKVSQGRLAPRPPPVE 271
C G PG QKG+ D+ P P P+G A + + +G + P
Sbjct: 23 CQGQDVRQPGPKGQKGEPGDIKDIVGPKGPPGPQGPAGEQ---GPRGDRGDKGEKGAPGP 79
Query: 272 KSKEIAIEQKENFDPLQYP-ETTPKGLAPVTNSSGKMALNSPQPGPVESELGKQL-LKTG 329
+ ++ N P P P GL N + +MA G E G QL + G
Sbjct: 80 RGRDGEPGTPGNPGPPGPPGPPGPPGLG--GNFAAQMA-----GGFDEKAGGAQLGVMQG 132
Query: 330 WEGSPLPRSPTQDAAGVGPPASQGR-GPAGE-----PMGPEAGSKAELPPTVSRPPLLRG 383
G PR P A GP QG G GE PMGP P G
Sbjct: 133 PMGPMGPRGPPGPAGAPGPQGFQGNPGEPGEPGVSGPMGPRGPPGPPGKPGDDGEAGKPG 192
Query: 384 LSWDSGPEEP-GPRLQKVLAKLPLAEEEKRFAGKAGGK-LAKAPGLK 428
+ + GP P G R LP + + + G G K A APG+K
Sbjct: 193 KAGERGPPGPQGARGFPGTPGLPGVKGHRGYPGLDGAKGEAGAPGVK 239
Score = 33.1 bits (74), Expect = 1.2
Identities = 50/224 (22%), Positives = 65/224 (29%), Gaps = 77/224 (34%)
Query: 205 PTPPGLDVCSGPPSPLPGAPPQKGDEADVSSP----------------HPGEPNVP---- 244
P PG+ GP P PG P + GD+ + P PG P +P
Sbjct: 161 PGEPGVSGPMGPRGP-PGPPGKPGDDGEAGKPGKAGERGPPGPQGARGFPGTPGLPGVKG 219
Query: 245 ----------------KGLADRKQNDQRKVSQGRLAPRPPPVEKSKEIAIEQKENFDPLQ 288
G+ + S G + PR P E+ +
Sbjct: 220 HRGYPGLDGAKGEAGAPGVKGESGSPGENGSPGPMGPRGLPGERGR-------------- 265
Query: 289 YPETTPKGLAPVTNSSGKMALNSPQPGPVESELGKQLLKTGWEGSPLPRSPTQDAAGVGP 348
T P G A + G QPGP G P P P G
Sbjct: 266 ---TGPAGAAGARGNDG-------QPGPA--------------GPPGPVGPAGGPGFPGA 301
Query: 349 PASQGR-GPAGEPMGPEAGSKAELPPTVSRPPLLRGLSWDSGPE 391
P ++G GP G GPE P P G S + G +
Sbjct: 302 PGAKGEAGPTG-ARGPEGAQGPRGEPGTPGSPGPAGASGNPGTD 344
>gi|239752594 PREDICTED: hypothetical protein, partial [Homo
sapiens]
Length = 673
Score = 50.8 bits (120), Expect = 6e-06
Identities = 87/356 (24%), Positives = 123/356 (34%), Gaps = 61/356 (17%)
Query: 53 PPGEPQAAQSPAGQGPPTAGVSCSP-TPTIVLTGDATSPEGETDKNLANRVHSPHKRLSH 111
P G P A SP G PP A +S P T ++ T SP G + ++ S ++
Sbjct: 220 PTGTPPRA-SPTGS-PPRASLSMMPSTALLIRTPPRASPTGMLSRTSLTKMDSTAS-ITR 276
Query: 112 RHLKVSTASLTSVDPAGHIIDLVND------QLPDISISEEDKKKNLALLEEAKLVSER- 164
+ STAS T P+ + + LP S + + +L ++ +S
Sbjct: 277 TPSRPSTASPTGT-PSRASLSMTPSTASLMRMLPRASPTGMLSRTSLTKMDSTASISRTP 335
Query: 165 ---FLTRRGRKSRSSPGDSPSAVSPNLSPS-ASPTSSRSN-SLTVPTPPGLDVCSGPPSP 219
+TR SR+SP PS SP +PS ASPT S S SLT GL + P
Sbjct: 336 PRASITRT--PSRASPTGKPSTASPTGTPSRASPTGSPSTASLT-----GLSSTASPTGT 388
Query: 220 LPGAPPQKGDEADVSSPHPGEPNVPKGLADRKQNDQRK--VSQGRLAPRPPPVEKSKEIA 277
P A P G + S P G+ R + S R PR P
Sbjct: 389 PPRASPT-GTPSTASLTRKPPRASPTGMLSRTSITKMDSTASPTRTPPRASPTGTP---- 443
Query: 278 IEQKENFDPLQYPETTPKGLAPVTNSSGKMALNSPQPGPVESELGKQLLKTGWEGSPLPR 337
P +P G + +G + SP GSP
Sbjct: 444 ------------PRASPTGTPSRASPTGTQSTASPT------------------GSPSTA 473
Query: 338 SPTQDAAGVGPPASQGRGPAGEPMGPEAGSKAELPPTVSRPPLLRGLSWDSGPEEP 393
SPT + P S R + +K E +++R P +W P
Sbjct: 474 SPTGSPSTASPTGSPSRASLTRTPSRASLTKMESTASITRTPSRASPTWTPSTASP 529
Score = 35.8 bits (81), Expect = 0.18
Identities = 55/220 (25%), Positives = 76/220 (34%), Gaps = 30/220 (13%)
Query: 173 SRSSPGDSPSAVSPNLS-PSASPTSSRSNSLTVPTPPGLDVCSGPPSPLPGAPPQKGDEA 231
SR+SP +P SP S P AS + S +L + TPP + P L K D
Sbjct: 216 SRASPTGTPPRASPTGSPPRASLSMMPSTALLIRTPPR----ASPTGMLSRTSLTKMDST 271
Query: 232 DVSSPHPGEPNV--PKGLADRKQNDQ--RKVSQGRLAPRPPPVEKSKEIAIEQKENFDPL 287
+ P P+ P G R S R+ PR P ++ + ++ +
Sbjct: 272 ASITRTPSRPSTASPTGTPSRASLSMTPSTASLMRMLPRASPTGMLSRTSLTKMDSTASI 331
Query: 288 QYPETTPKGLAPVTNS----SGKMALNSPQPGPVESELGKQLLKTGWEGSPLPRSPTQDA 343
T P+ T S +GK + SP P + SP T
Sbjct: 332 S--RTPPRASITRTPSRASPTGKPSTASPTGTPSRA-------------SPTGSPSTASL 376
Query: 344 AGVGPPAS-QGRGPAGEPMG-PEAGSKAELPPTVSRPPLL 381
G+ AS G P P G P S PP S +L
Sbjct: 377 TGLSSTASPTGTPPRASPTGTPSTASLTRKPPRASPTGML 416
Score = 31.6 bits (70), Expect = 3.5
Identities = 70/304 (23%), Positives = 96/304 (31%), Gaps = 69/304 (22%)
Query: 48 PEDEEPPGEPQAAQ--------SPAGQGPPTAGVSCSPTPTIVLTGDATSPEGETDKNLA 99
P P G P A SP G T+ T + T SP G +
Sbjct: 389 PPRASPTGTPSTASLTRKPPRASPTGMLSRTSITKMDSTASPTRTPPRASPTGTPPRASP 448
Query: 100 NRVHSPHKRLSHRHLKVSTASLTSVDPAGHIIDLVNDQLPDISISEEDKKKNLALLEEAK 159
S + T S ++ P G + P S S + + K
Sbjct: 449 TGTPSRASPTGTQSTASPTGSPSTASPTGS----PSTASPTGSPSRASLTRTPSRASLTK 504
Query: 160 LVSERFLTRRGRKSRSSPGDSPSAVSPNLSPSA-----SP-------TSSRSN------- 200
+ S +TR SR+SP +PS SP SPS SP T SR++
Sbjct: 505 MESTASITRT--PSRASPTWTPSTASPTGSPSTALAMGSPSRAALTRTPSRASLTRTPSR 562
Query: 201 -SLTVP-------TPPGLDVCSGPPSPLPGAPPQKGDEADVSSPHPGEPNVPKGLADRKQ 252
SLT P TP + + PPS P P + +SP +P K
Sbjct: 563 ASLTTPSRASLTRTPSTVLLTRMPPSASPTGMPSR------TSP----TGMPSSALLTKM 612
Query: 253 NDQRKVSQGRLAPRPPPVEKSKEIAIEQKENFDPLQYPETTPKGLAPVTNSSGKMALNSP 312
+ ++ R PR P E P +P G P + +G SP
Sbjct: 613 DSTASIT--RTPPRASPTETP----------------PRASPTGTPPRASPTGTPPRASP 654
Query: 313 QPGP 316
P
Sbjct: 655 TGTP 658
Score = 30.8 bits (68), Expect = 5.9
Identities = 55/230 (23%), Positives = 77/230 (33%), Gaps = 46/230 (20%)
Query: 38 SQQEAAMPHIPEDEEPPGEPQAAQSPAGQGPPTAGVSCSPTPTIVLTGDATSPEGETDK- 96
+Q A+ P P G P A SP G P A ++ +P+ + ++T+ T
Sbjct: 460 TQSTASPTGSPSTASPTGSPSTA-SPTGS-PSRASLTRTPSRASLTKMESTASITRTPSR 517
Query: 97 -------NLANRVHSPHKRLSHRHLKVSTASLTSVDPAGHIIDLVNDQLPDISISEEDKK 149
+ A+ SP L+ S A+LT S++ +
Sbjct: 518 ASPTWTPSTASPTGSPSTALAMG--SPSRAALTRTPSRA-------------SLTRTPSR 562
Query: 150 KNLALLEEAKLV---SERFLTRR-------GRKSRSSPGDSPS----------AVSPNLS 189
+L A L S LTR G SR+SP PS A
Sbjct: 563 ASLTTPSRASLTRTPSTVLLTRMPPSASPTGMPSRTSPTGMPSSALLTKMDSTASITRTP 622
Query: 190 PSASPTSSRSNSLTVPTPPGLDVCSGPPSPLP-GAPPQKGDEADVSSPHP 238
P ASPT + + TPP PP P G PP+ S P
Sbjct: 623 PRASPTETPPRASPTGTPPRASPTGTPPRASPTGTPPRASPTGTPSRASP 672
>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
sapiens]
Length = 816
Score = 50.4 bits (119), Expect = 7e-06
Identities = 66/246 (26%), Positives = 90/246 (36%), Gaps = 36/246 (14%)
Query: 176 SPGDSPSAVSPNLSPSASPTSSRSNSLTVPTPPGLDVCSGPPSPLPGAPPQKGDEADVSS 235
SP SP +P SP ASP S S + PP L + PP +P +PP + ++
Sbjct: 402 SPPPSPPVQAP-FSPPASPPVSPSATPPSQAPPSL---AAPPLQVPPSPPASPPMSPSAT 457
Query: 236 PHPGEPNVPKGLADRKQNDQRKVSQGRLAPRPPPVE--KSKEIAIEQKENFDPL----QY 289
P P P LA + Q A PP++ S + + F P
Sbjct: 458 P---PPQAPPPLAAPPLQLAKPPPQAPPALATPPLQALPSPPASFPGQAPFSPSASLPMS 514
Query: 290 PETTPKGLAPVTNSSGKMAL--------------NSPQPGPVESELGKQLLKTGWEGSPL 335
P TP AP ++ + + P PGP S G +L G P
Sbjct: 515 PLATPPPQAPPVLAAPLLQVPPSPPASPTLQAPRRPPTPGPDTSVSGPRLTLALAPGPPP 574
Query: 336 P--RSPTQDAAG---VGPPASQGRGP---AGEPMGPEAGSKAELPPTVSRPPLLRGLSWD 387
P RSP+ +G G +S P G GPE G+ A PP + +W
Sbjct: 575 PPSRSPSSTLSGPDLAGHSSSATSTPEELRGYDSGPEGGAAAS-PPPDAELAACHPAAWS 633
Query: 388 SGPEEP 393
GP P
Sbjct: 634 RGPAPP 639
Score = 47.4 bits (111), Expect = 6e-05
Identities = 63/237 (26%), Positives = 86/237 (36%), Gaps = 20/237 (8%)
Query: 175 SSPGDSPSAVSPNL-SPSASPTSSRSNS-----LTVPTPPGLDVCSGPPSPLPGAPPQKG 228
S P PS + +L SP+ T S S L P P + PP P +PP
Sbjct: 317 SPPATPPSQATTSLGSPTLQATHSFLPSPPLSPLATPPPQAPPALALPPLQAPPSPPASP 376
Query: 229 DEADVSSPHPGEPN---VPKGLADRKQNDQRKVSQGRLAPRPPPVEKSKEIAIEQKENF- 284
+ +++P P PN V A V P PPV S + +
Sbjct: 377 PLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSATPPSQAPPSLA 436
Query: 285 -DPLQYPETTPKGLAPVTNSSGKMALNSPQPGPVESELGKQLLKTGWEGSPLPRSPTQDA 343
PLQ P + P P++ S A PQ P + QL K + P +P A
Sbjct: 437 APPLQVPPSPPAS-PPMSPS----ATPPPQAPPPLAAPPLQLAKPPPQAPPALATPPLQA 491
Query: 344 AGVGPPASQGRGP----AGEPMGPEAGSKAELPPTVSRPPLLRGLSWDSGPEEPGPR 396
P + G+ P A PM P A + PP ++ P L S + P PR
Sbjct: 492 LPSPPASFPGQAPFSPSASLPMSPLATPPPQAPPVLAAPLLQVPPSPPASPTLQAPR 548
Score = 40.8 bits (94), Expect = 0.006
Identities = 61/248 (24%), Positives = 81/248 (32%), Gaps = 53/248 (21%)
Query: 181 PSAVSP---NLSPSASPTSSRSNSLTVPTPPGLDVCSGPPSPLPGAPPQKGDEADVSSPH 237
P V+P + +P+ P SS + L P+P S PPSP APP
Sbjct: 273 PPQVTPPRKDAAPALGPLSS--SPLATPSP------SAPPSP--SAPPSL-------QTL 315
Query: 238 PGEPNVPKGLADRKQNDQRKVSQGRLAPRPP-------PVEKSKEIAIEQKENFDPLQYP 290
P P P A + P PP P + +A+ PLQ P
Sbjct: 316 PSPPATPPSQATTSLGSPTLQATHSFLPSPPLSPLATPPPQAPPALALP------PLQAP 369
Query: 291 ETTPKG--LAPVTNSSGK----------MALNSPQPGPVESELGKQLLKTGWEGSPLPRS 338
+ P L+P+ S + A SP P P S P S
Sbjct: 370 PSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSATPPS 429
Query: 339 PTQDAAGVGPPASQGRGPAGEPMGPEAGSKAELPPTVSRPPLLRGLSWDSGPEEPGPRLQ 398
+ P PA PM P A + PP ++ PPL +P P+
Sbjct: 430 QAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQLA--------KPPPQAP 481
Query: 399 KVLAKLPL 406
LA PL
Sbjct: 482 PALATPPL 489
Score = 33.9 bits (76), Expect = 0.70
Identities = 62/247 (25%), Positives = 87/247 (35%), Gaps = 40/247 (16%)
Query: 167 TRRGRKSRSSPGD-SPSAVSPNLSPSASPTSSRSNSLTVPTPPGLD---------VCSGP 216
TR R S G+ +P A + + P +SP R++ T P P G V G
Sbjct: 80 TRTSRPPASGRGERAPPAKNTSPGPVSSP--GRASGTTRPGPLGQKGLRISAEETVARGK 137
Query: 217 PSPLPGAPP-QKGDEADVSSPHPGEPNVPKGLADRKQNDQRKVSQGRLAP--RP-PPVEK 272
+ P G D S P PG P+ +A R + +V R AP RP PP E
Sbjct: 138 ATEAPKRSALSAGARRDTSGPTPGTPS--PAMARRSRAAGTEVGLPRPAPSARPRPPTEG 195
Query: 273 SKEIAIEQKENFDPLQYPETTPKGLAPVTNSSGKMALNSPQPGPVESELG--KQLLKTGW 330
++ E+ TT A S L P + S ++G
Sbjct: 196 PRKSVSSASEH-------STTEPSPAARRRPSAGGGLQRPASRSLSSSATPLSSPARSGP 248
Query: 331 EGSPLPRSPTQDA--------AGVGPPASQGRGPAGEPMGPEAGS-----KAELPPTVSR 377
PR+P + A P + R A +GP + S PP+ S
Sbjct: 249 SARGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSPLATPSPSAPPSPSA 308
Query: 378 PPLLRGL 384
PP L+ L
Sbjct: 309 PPSLQTL 315
>gi|28559039 mediator complex subunit 1 [Homo sapiens]
Length = 1581
Score = 50.1 bits (118), Expect = 9e-06
Identities = 53/244 (21%), Positives = 90/244 (36%), Gaps = 34/244 (13%)
Query: 53 PPGEPQAAQSP--AGQGPPTAGVSCSPTPTIVL-----TGDATSPEGETDKNLANRVHSP 105
PP ++SP AG+ GV+ P P I + T P + + V S
Sbjct: 1033 PPTSTGGSKSPGSAGRSQTPPGVATPPIPKITIQIPKGTVMVGKPSSHSQYTSSGSVSSS 1092
Query: 106 HKRLSHRHLKVSTASLTSVDPAGHIIDLVNDQLPDISISEEDKKKNLALLEEAKLVSERF 165
+ H H S++S +S +G + ++ +S + ++ S
Sbjct: 1093 GSKSHHSH---SSSSSSSASTSGKMKSSKSEGSSSSKLSSS--------MYSSQGSSGSS 1141
Query: 166 LTRRGRKSRSSPGDSP--------SAVSPNLSPSASPTSSRSNSLTVPT--------PPG 209
++ +S PG SP + S + P P+S + SL+ P P G
Sbjct: 1142 QSKNSSQSGGKPGSSPITKHGLSSGSSSTKMKPQGKPSSLMNPSLSKPNISPSHSRPPGG 1201
Query: 210 LDVCSGPPSPLPGAPPQKGDEADVSSPHPGEPNVPKGLADRKQNDQRKVSQGRLAPRPPP 269
D + P P+PG PP ++ +SS G + ++ S G L+ + PP
Sbjct: 1202 SDKLASPMKPVPGTPPSSKAKSPISSGSGGSHMSGTSSSSGMKSSSGLGSSGSLSQKTPP 1261
Query: 270 VEKS 273
S
Sbjct: 1262 SSNS 1265
>gi|110349772 alpha 1 type I collagen preproprotein [Homo sapiens]
Length = 1464
Score = 49.7 bits (117), Expect = 1e-05
Identities = 69/234 (29%), Positives = 82/234 (35%), Gaps = 35/234 (14%)
Query: 207 PPGLDVCSGPPSPL--PGAPPQKGDEADVSSPHPGEPNVPKGLADRKQNDQRKVSQGRLA 264
PPG +GPP P+ GAP KG A S+ PG P G A R G
Sbjct: 840 PPGPAGPAGPPGPIGNVGAPGAKG--ARGSAGPPGATGFP-GAAGRVGPPG---PSGNAG 893
Query: 265 PRPPPVEKSKEIAIEQKENFDPLQYP-ETTPKGLAPVTNSSGKMALNSPQPGPVESELGK 323
P PP KE + P P E P G G + P P
Sbjct: 894 PPGPPGPAGKEGGKGPRGETGPAGRPGEVGPPGPPGPAGEKGSPGADGPAGAP------- 946
Query: 324 QLLKTGWEGSPLPRSPTQDAAGVGPPASQGR-------GPAGEP--MGPEAGSKAELPPT 374
G+P P+ VG P +G GP+GEP GP S PP
Sbjct: 947 --------GTPGPQGIAGQRGVVGLPGQRGERGFPGLPGPSGEPGKQGPSGASGERGPPG 998
Query: 375 VSRPPLLRGLSWDSGPE-EPGPRLQKVLAKLPLAEEEKRFAGKAGGKLAK-APG 426
PP L G +SG E PG P A+ ++ G AG A APG
Sbjct: 999 PMGPPGLAGPPGESGREGAPGAEGSPGRDGSPGAKGDRGETGPAGPPGAPGAPG 1052
Score = 49.7 bits (117), Expect = 1e-05
Identities = 60/204 (29%), Positives = 76/204 (37%), Gaps = 31/204 (15%)
Query: 177 PGDSPSAVSPNLSPS----ASPTSSRSNSLTVPT-PPGLDVCSGPPSPLPGAPPQKGDEA 231
PG+S +P S SP + T P PPG G P P+ G + GD
Sbjct: 1009 PGESGREGAPGAEGSPGRDGSPGAKGDRGETGPAGPPGAPGAPGAPGPV-GPAGKSGDRG 1067
Query: 232 DVSSPHPGEPNVPKGLADRKQNDQRKVSQGRLAPRPPPVEKSK-----EIAIEQKENFDP 286
+ P P P G ++G P+ P +K + + I+ F
Sbjct: 1068 ETGPAGPAGPVGPVG------------ARGPAGPQGPRGDKGETGEQGDRGIKGHRGFSG 1115
Query: 287 LQYPETTP--KGLAPVTNSSGKMALNSPQPGPVESELGKQLLK--TGWEGSPLPRSPTQD 342
LQ P P G + +SG P PG + GK L G G P PR T D
Sbjct: 1116 LQGPPGPPGSPGEQGPSGASGPAGPRGP-PGSAGAP-GKDGLNGLPGPIGPPGPRGRTGD 1173
Query: 343 AAGVGPPASQGRGPAGEPMGPEAG 366
A VGPP GP G P P AG
Sbjct: 1174 AGPVGPPGPP--GPPGPPGPPSAG 1195
Score = 43.9 bits (102), Expect = 7e-04
Identities = 72/250 (28%), Positives = 94/250 (37%), Gaps = 47/250 (18%)
Query: 208 PGLDVCSGPPSPL-----PGAPPQKGDEADVSSPHPGEPNVP--KGLA--------DRKQ 252
PG D +GP P PG KG + PGE +P KGL D K
Sbjct: 496 PGADGVAGPKGPAGERGSPGPAGPKGSPGEAG--RPGEAGLPGAKGLTGSPGSPGPDGKT 553
Query: 253 NDQRKVSQ-GRLAPRPPPVEKSKEIAIEQKENFDPLQYPETTPKGLAPVTNSSGKMALNS 311
Q GR P PP + + + +P PKG A +G+ +
Sbjct: 554 GPPGPAGQDGRPGPPGPPGARGQA---------GVMGFPG--PKGAAGEPGKAGERGVPG 602
Query: 312 PQPGPVESELGKQLLKTGWEGSPLPRSPTQDAAGVGPPASQG----RGPAGEPMGPEAGS 367
P PG V GK + G +G P P P + GP S G GPAG P EAG
Sbjct: 603 P-PGAV-GPAGKDG-EAGAQGPPGPAGPAGERGEQGPAGSPGFQGLPGPAGPP--GEAGK 657
Query: 368 KAE--LPPTVSRPPLL-----RGLSWDSGPE-EPGPRLQKVLAKLPLAEEEKRFAGKAGG 419
E +P + P RG + G + PGP + P + K AG G
Sbjct: 658 PGEQGVPGDLGAPGPSGARGERGFPGERGVQGPPGPAGPRGANGAPGNDGAKGDAGAPGA 717
Query: 420 KLAK-APGLK 428
++ APGL+
Sbjct: 718 PGSQGAPGLQ 727
Score = 43.9 bits (102), Expect = 7e-04
Identities = 62/234 (26%), Positives = 86/234 (36%), Gaps = 37/234 (15%)
Query: 181 PSAVSPNLSPSASPTSSRSNSLTVPT----PPGLDVCSGPPSPLPGAPPQKGDE-ADVSS 235
P S N P P + P P G GPP P PG +KG AD +
Sbjct: 885 PPGPSGNAGPPGPPGPAGKEGGKGPRGETGPAGRPGEVGPPGP-PGPAGEKGSPGADGPA 943
Query: 236 PHPGEPNVPKGLADRK-------QNDQRKVSQGRLAPRPPPVEKSKEIAIEQKENFDPLQ 288
PG P P+G+A ++ Q +R G P P ++ A ++ P+
Sbjct: 944 GAPGTPG-PQGIAGQRGVVGLPGQRGERGFP-GLPGPSGEPGKQGPSGASGERGPPGPMG 1001
Query: 289 YPETTPKGLAPVTNSSGKMALNSPQPGPVESELGKQLLKTGWEGSPLPRSPTQDAAGVGP 348
P GLA SG+ + P G +GSP + + GP
Sbjct: 1002 -----PPGLAGPPGESGREGAPGAEGSP------------GRDGSPGAKGDRGETGPAGP 1044
Query: 349 PASQGRGPAGEPMGP--EAGSKAELPPTVSRPPLLRGLSWDSGPEEP-GPRLQK 399
P + G A P+GP ++G + E P P+ G GP P GPR K
Sbjct: 1045 PGAPGAPGAPGPVGPAGKSGDRGETGPAGPAGPV--GPVGARGPAGPQGPRGDK 1096
Score = 39.7 bits (91), Expect = 0.013
Identities = 62/227 (27%), Positives = 77/227 (33%), Gaps = 44/227 (19%)
Query: 205 PTPPGLDVCSGPPSPL--PGAPPQKGDEADVSSP-HPGEPNVP-----------KGLADR 250
P PG SGP P PG P + GD+ + P PGE P GL
Sbjct: 205 PGEPGEPGASGPMGPRGPPGPPGKNGDDGEAGKPGRPGERGPPGPQGARGLPGTAGLPGM 264
Query: 251 KQN------DQRKVSQGRLAPRPPPVEKSKEIAIEQK-------ENFDPLQYPETTPKGL 297
K + D K G P+ P + A Q E P +G
Sbjct: 265 KGHRGFSGLDGAKGDAGPAGPKGEPGSPGENGAPGQMGPRGLPGERGRPGAPGPAGARGN 324
Query: 298 APVTNSSGKMALNSPQ-----PGPV--ESELGKQLLKTGWEGSPLPRSPTQDAAGVGPPA 350
T ++G P PG V + E G Q G GS P+ + GPP
Sbjct: 325 DGATGAAGPPGPTGPAGPPGFPGAVGAKGEAGPQ----GPRGSEGPQGVRGEP---GPPG 377
Query: 351 SQGR-GPAGEPM--GPEAGSKAELPPTVSRPPLLRGLSWDSGPEEPG 394
G GPAG P G A P ++ P G SGP+ PG
Sbjct: 378 PAGAAGPAGNPGADGQPGAKGANGAPGIAGAPGFPGARGPSGPQGPG 424
Score = 39.7 bits (91), Expect = 0.013
Identities = 60/241 (24%), Positives = 76/241 (31%), Gaps = 45/241 (18%)
Query: 169 RGRKSRSSPGDSPSAVSPNLSPSASPTSSRSNSLTVPTPPGLDVCSGP------------ 216
RG PG P + P A + + + P P G+ GP
Sbjct: 415 RGPSGPQGPGGPPGPKGNSGEPGAPGSKGDTGAKGEPGPVGVQGPPGPAGEEGKRGARGE 474
Query: 217 --PSPLPGAPPQKGDEADVSSPHPGEPNVPKGLADRKQNDQRKVSQGRLAPRPPPVEKSK 274
P+ LPG P ++G P PKG A + S G P+ P E +
Sbjct: 475 PGPTGLPGPPGERGGPGSRGFPGADGVAGPKGPAGERG------SPGPAGPKGSPGEAGR 528
Query: 275 EIAIEQKENFDPLQYPETTPKGLAPVTNSSGKMALNSPQPGPVESELGKQLLKTGWEGSP 334
P + KGL S G P PGP + G G P
Sbjct: 529 -----------PGEAGLPGAKGLTGSPGSPGPDGKTGP-PGPAGQD--------GRPGPP 568
Query: 335 LPRSPTQDAAGVGPPASQGRGPAGEPMGPEAGSKAELPPTVSRPPLLRGLSWDSGPEEPG 394
P A +G P +G AGEP G PP P G + GP PG
Sbjct: 569 GPPGARGQAGVMGFPGP--KGAAGEP-GKAGERGVPGPPGAVGPAGKDGEAGAQGP--PG 623
Query: 395 P 395
P
Sbjct: 624 P 624
Score = 38.9 bits (89), Expect = 0.022
Identities = 64/227 (28%), Positives = 76/227 (33%), Gaps = 42/227 (18%)
Query: 181 PSAVSPNLSPSASPTSSRSNSLTVPTPPGLDVCSGPP--SPLPGAPPQKGDEADVSSPHP 238
P P+ P S S P P G +GPP S GAP +G P
Sbjct: 973 PGLPGPSGEPGKQGPSGASGERGPPGPMGPPGLAGPPGESGREGAPGAEGS--------P 1024
Query: 239 GEPNVPKGLADRKQNDQRKVSQGRLAPRPP----PVEKSKEIAIEQKENFDPLQYPETTP 294
G P DR + AP P P KS + ET P
Sbjct: 1025 GRDGSPGAKGDRGETGPAGPPGAPGAPGAPGPVGPAGKSGDRG-------------ETGP 1071
Query: 295 KGLAPVTNSSGKMALNSPQ-PGPVESELGKQLLKTGWEGSPLPRSPTQDAAGVGPPASQG 353
G A G PQ P + E G+Q G G R + GPP S G
Sbjct: 1072 AGPAGPVGPVGARGPAGPQGPRGDKGETGEQ----GDRGIKGHRGFSGLQGPPGPPGSPG 1127
Query: 354 -RGPAGE--PMGPEAGSKAELPPTVSRPPLLRGLSWDSGP-EEPGPR 396
+GP+G P GP PP + P GL+ GP PGPR
Sbjct: 1128 EQGPSGASGPAGPRG------PPGSAGAPGKDGLNGLPGPIGPPGPR 1168
Score = 35.8 bits (81), Expect = 0.18
Identities = 60/228 (26%), Positives = 74/228 (32%), Gaps = 79/228 (34%)
Query: 204 VPTPPGLDVCSGPPSPLPGAPPQKGDEAD-------------VSSPHPGEPNVPKGLADR 250
+P PGL GPP P PG P G+ A +S P P P+ P+GL
Sbjct: 134 IPGQPGLPGPPGPPGP-PGPPGLGGNFAPQLSYGYDEKSTGGISVPGPMGPSGPRGL--- 189
Query: 251 KQNDQRKVSQGRLAPRPPPVEKSKEIAIEQKENFDPLQYPETTPKGLAPVTNSSGKMALN 310
P PP P P G +SG M
Sbjct: 190 --------------PGPPGA---------------PGPQGFQGPPGEPGEPGASGPMGPR 220
Query: 311 SPQPGPV-----ESELGKQLLKTGWEGSPLPRSPTQDAAGVGPPASQGR----------- 354
P PGP + E GK + G G P P+ G P +G
Sbjct: 221 GP-PGPPGKNGDDGEAGKP-GRPGERGPPGPQGARGLPGTAGLPGMKGHRGFSGLDGAKG 278
Query: 355 -----GPAGEPMGP-EAGSKAELPPTVSRPPLLRGLSWDSG-PEEPGP 395
GP GEP P E G+ ++ P RGL + G P PGP
Sbjct: 279 DAGPAGPKGEPGSPGENGAPGQMGP--------RGLPGERGRPGAPGP 318
Score = 35.8 bits (81), Expect = 0.18
Identities = 60/233 (25%), Positives = 78/233 (33%), Gaps = 43/233 (18%)
Query: 192 ASPTSSRSNSLTVPTP--PGLDVCSGPPSPLPGAPPQKGDEADVSSP----------HPG 239
A P R +P GL +GPP G P ++G D+ +P PG
Sbjct: 625 AGPAGERGEQGPAGSPGFQGLPGPAGPPGEA-GKPGEQGVPGDLGAPGPSGARGERGFPG 683
Query: 240 EPNV--------PKGLADRKQNDQRKVSQGRLAPRPPPVEKSKEI-AIEQKENFDPLQYP 290
E V P+G ND K G AP P + + + + + L P
Sbjct: 684 ERGVQGPPGPAGPRGANGAPGNDGAKGDAG--APGAPGSQGAPGLQGMPGERGAAGLPGP 741
Query: 291 -----ETTPKGLAPVTNSSGKMALNSP--QPGPVESELGKQLLKTGWEGSPLPRSPTQDA 343
+ PKG G L P PGP + G +G P P
Sbjct: 742 KGDRGDAGPKGADGSPGKDGVRGLTGPIGPPGPAGAP--------GDKGESGPSGPAGPT 793
Query: 344 AGVGPPASQGR-GPAGEPMGPEAGSKAELPPTVSRPPLLRGLSWDSGPEEPGP 395
G P +G GP G P G A+ P P G D+GP PGP
Sbjct: 794 GARGAPGDRGEPGPPG-PAGFAGPPGADGQPGAKGEPGDAGAKGDAGP--PGP 843
Score = 31.6 bits (70), Expect = 3.5
Identities = 35/110 (31%), Positives = 44/110 (40%), Gaps = 21/110 (19%)
Query: 328 TGWEGSPLPRSPTQDAAGVGPPASQG----RGPAGEPMGPEAGSKAELPPTVSRPPLLRG 383
TG P P P+ GPP + G +GP GEP P A P PP G
Sbjct: 172 TGGISVPGPMGPSGPRGLPGPPGAPGPQGFQGPPGEPGEPGASG----PMGPRGPPGPPG 227
Query: 384 LSWDSG-------PEE---PGPRLQKVL---AKLPLAEEEKRFAGKAGGK 420
+ D G P E PGP+ + L A LP + + F+G G K
Sbjct: 228 KNGDDGEAGKPGRPGERGPPGPQGARGLPGTAGLPGMKGHRGFSGLDGAK 277
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.308 0.127 0.363
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 43,348,463
Number of Sequences: 37866
Number of extensions: 2680173
Number of successful extensions: 33261
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 376
Number of HSP's successfully gapped in prelim test: 1315
Number of HSP's that attempted gapping in prelim test: 19081
Number of HSP's gapped (non-prelim): 11052
length of query: 903
length of database: 18,247,518
effective HSP length: 111
effective length of query: 792
effective length of database: 14,044,392
effective search space: 11123158464
effective search space used: 11123158464
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)
S2: 67 (30.4 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.