Guide to the Human Genome
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Name: MRVI1 Sequence: fasta or formatted (821aa) NCBI GI: 148728182
Description:

JAW1-related protein isoform b

Referenced in:

Cyclic Nucleotides
Inositol Pathways

Other entries for this name:
alt prot [903aa] JAW1-related protein isoform a
alt mRNA [821aa] JAW1-related protein isoform b
alt prot [597aa] JAW1-related protein isoform c
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.3         60           2
 C cysteine            1.0          8           1
 D aspartate           3.5         29           1
 E glutamate          10.8         89           5
 F phenylalanine       1.3         11           1
 G glycine             6.3         52           2
 H histidine           1.9         16           2
 I isoleucine          1.8         15           2
 K lysine              6.9         57           3
 L leucine            11.0         90           2
 M methionine          2.1         17           2
 N asparagine          3.8         31           1
 P proline             9.4         77           3
 Q glutamine           4.5         37           1
 R arginine            5.6         46           3
 S serine             10.7         88           4
 T threonine           4.4         36           2
 V valine              5.6         46           2
 W tryptophan          0.9          7           2
 Y tyrosine            1.1          9           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   JAW1-related protein isoform b 
MRVI1                 1.000   JAW1-related protein isoform b 
MRVI1                 0.999   JAW1-related protein isoform a 
MRVI1                 0.721   JAW1-related protein isoform c 
LRMP                  0.067   lymphoid-restricted membrane protein 
PRB4                  0.022   proline-rich protein BstNI subfamily 4 precursor [Ho...
PRB2                  0.022   proline-rich protein BstNI subfamily 2 
PRG4                  0.018   proteoglycan 4 isoform D 
PRG4                  0.018   proteoglycan 4 isoform C 
PRG4                  0.018   proteoglycan 4 isoform B 
PRG4                  0.018   proteoglycan 4 isoform A 
SYN1                  0.018   synapsin I isoform Ib 
PRB1                  0.018   proline-rich protein BstNI subfamily 1 isoform 1 pre...
DIAPH1                0.018   diaphanous 1 isoform 2 
DIAPH1                0.018   diaphanous 1 isoform 1 
FLJ22184              0.017   PREDICTED: hypothetical protein FLJ22184 
COL11A2               0.017   collagen, type XI, alpha 2 isoform 2 preproprotein ...
COL11A2               0.017   collagen, type XI, alpha 2 isoform 3 preproprotein ...
COL11A2               0.017   collagen, type XI, alpha 2 isoform 1 preproprotein ...
C17orf82              0.017   hypothetical protein LOC388407 
PELP1                 0.016   proline, glutamic acid and leucine rich protein 1 [...
PRB1                  0.016   proline-rich protein BstNI subfamily 1 isoform 2 pre...
COL2A1                0.016   collagen, type II, alpha 1 isoform 1 precursor [Hom...
COL2A1                0.016   collagen, type II, alpha 1 isoform 2 precursor [Hom...
FLJ22184              0.016   PREDICTED: hypothetical protein LOC80164 
NACA                  0.016   nascent polypeptide-associated complex alpha subuni...
COL1A1                0.016   alpha 1 type I collagen preproprotein 
CREBBP                0.016   CREB binding protein isoform b 
CREBBP                0.016   CREB binding protein isoform a 
SYNJ1                 0.015   synaptojanin 1 isoform c 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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