Guide to the Human Genome
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Name: TXNDC8 Sequence: fasta or formatted (115aa) NCBI GI: 51510891
Description:

thioredoxin domain containing 8

Referenced in:

Glutathione Pathways

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.1          7           2
 C cysteine            5.2          6           2
 D aspartate           3.5          4           2
 E glutamate           3.5          4           1
 F phenylalanine       9.6         11           2
 G glycine             3.5          4           1
 H histidine           2.6          3           1
 I isoleucine          6.1          7           2
 K lysine              9.6         11           2
 L leucine             5.2          6           1
 M methionine          4.3          5           1
 N asparagine          6.1          7           2
 P proline             3.5          4           1
 Q glutamine           4.3          5           1
 R arginine            4.3          5           1
 S serine              7.0          8           2
 T threonine           6.1          7           1
 V valine              7.8          9           2
 W tryptophan          0.0          0           0
 Y tyrosine            1.7          2           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   thioredoxin domain containing 8 
TXN                   0.327   thioredoxin 
TXNDC2                0.276   thioredoxin domain-containing 2 isoform 1 
TXNDC2                0.276   thioredoxin domain-containing 2 isoform 2 
TXNDC2                0.276   thioredoxin domain-containing 2 isoform 1 
TXNL1                 0.187   thioredoxin-like 1 
GLRX3                 0.098   glutaredoxin 3 
TXN2                  0.079   thioredoxin 2 precursor 
PDIA5                 0.065   protein disulfide isomerase A5 
P4HB                  0.056   prolyl 4-hydroxylase, beta subunit precursor 
TXNDC5                0.051   thioredoxin domain containing 5 isoform 1 precursor ...
PDIA4                 0.042   protein disulfide isomerase A4 
PDIA3                 0.042   protein disulfide-isomerase A3 precursor 
PDIA6                 0.033   protein disulfide isomerase A6 
TXNDC5                0.033   thioredoxin domain containing 5 isoform 3 
TXNDC9                0.033   thioredoxin domain containing 9 
PDIA2                 0.028   protein disulfide isomerase A2 
PDILT                 0.023   protein disulfide isomerase-like, testis expressed [...
TMX3                  0.014   thioredoxin domain containing 10 
TXNDC3                0.014   thioredoxin domain containing 3 
DMXL1                 0.009   Dmx-like 1 
DNAJC10               0.009   DnaJ (Hsp40) homolog, subfamily C, member 10 
TMX2                  0.009   thioredoxin domain containing 14 isoform 2 
TMX2                  0.009   thioredoxin domain containing 14 isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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