Guide to the Human Genome
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Name: EPN1 Sequence: fasta or formatted (662aa) NCBI GI: 194272148
Description:

epsin 1 isoform a

Referenced in:

Additional Membrane Functions

Other entries for this name:
alt prot [576aa] epsin 1 isoform b
alt prot [550aa] epsin 1 isoform c
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            11.6         77           3
 C cysteine            0.6          4           1
 D aspartate           5.0         33           2
 E glutamate           5.7         38           3
 F phenylalanine       2.1         14           1
 G glycine             9.4         62           3
 H histidine           1.1          7           1
 I isoleucine          2.0         13           1
 K lysine              3.2         21           1
 L leucine             8.3         55           3
 M methionine          2.4         16           2
 N asparagine          2.6         17           1
 P proline            14.5         96           3
 Q glutamine           3.2         21           2
 R arginine            4.5         30           2
 S serine              9.4         62           3
 T threonine           6.0         40           2
 V valine              5.1         34           2
 W tryptophan          2.3         15           1
 Y tyrosine            1.1          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   epsin 1 isoform a 
EPN1                  0.827   epsin 1 isoform c 
EPN1                  0.821   epsin 1 isoform b 
EPN2                  0.346   epsin 2 isoform a 
EPN3                  0.291   epsin 3 
EPN2                  0.288   epsin 2 isoform b 
ENTHD1                0.139   ENTH domain containing 1 
EPN2                  0.123   epsin 2 isoform c 
CLINT1                0.108   epsin 4 
NACA                  0.050   nascent polypeptide-associated complex alpha subuni...
MLL2                  0.040   myeloid/lymphoid or mixed-lineage leukemia 2 
TAF4                  0.037   TBP-associated factor 4 
TPRX1                 0.035   tetra-peptide repeat homeobox 
FLJ22184              0.035   PREDICTED: hypothetical protein LOC80164 
MUC2                  0.035   mucin 2 precursor 
FLJ22184              0.035   PREDICTED: hypothetical protein FLJ22184 
SRCAP                 0.034   Snf2-related CBP activator protein 
NCOR2                 0.034   nuclear receptor co-repressor 2 isoform 1 
KIAA0754              0.033   hypothetical protein LOC643314 
LMTK3                 0.033   lemur tyrosine kinase 3 
MAPK1IP1L             0.033   MAPK-interacting and spindle-stabilizing protein [Ho...
SF1                   0.033   splicing factor 1 isoform 1 
NCOR2                 0.032   nuclear receptor co-repressor 2 isoform 2 
BAT2                  0.032   HLA-B associated transcript-2 
PRG4                  0.031   proteoglycan 4 isoform D 
PRG4                  0.031   proteoglycan 4 isoform C 
PRG4                  0.031   proteoglycan 4 isoform B 
PRG4                  0.031   proteoglycan 4 isoform A 
PRB2                  0.031   proline-rich protein BstNI subfamily 2 
SF1                   0.031   splicing factor 1 isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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