SMARCD1 3271

Name: SMARCD1	Sequence: fasta or formatted (515aa)		NCBI GI: 133908629
Description: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin d1 isoform a		Referenced in: Nonhistone Chromosomal Proteins
Other entries for this name: alt prot [474aa] SWI/SNF-related matrix-associated actin-dependent regulator of ch...
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.6 39 4 C cysteine 1.0 5 1 D aspartate 5.6 29 2 E glutamate 5.6 29 3 F phenylalanine 3.7 19 2 G glycine 6.6 34 2 H histidine 1.7 9 1 I isoleucine 5.2 27 3 K lysine 6.2 32 4 L leucine 8.3 43 2 M methionine 3.1 16 1 N asparagine 3.1 16 1 P proline 7.6 39 2 Q glutamine 8.9 46 3 R arginine 7.4 38 2 S serine 5.2 27 2 T threonine 4.9 25 2 V valine 4.7 24 2 W tryptophan 1.0 5 1 Y tyrosine 2.5 13 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 SWI/SNF-related matrix-associated actin-dependent r... SMARCD1 0.898 SWI/SNF-related matrix-associated actin-dependent r... SMARCD3 0.665 SWI/SNF related, matrix associated, actin dependent ... SMARCD3 0.665 SWI/SNF related, matrix associated, actin dependent ... SMARCD3 0.663 SWI/SNF related, matrix associated, actin dependent ... SMARCD2 0.615 SWI/SNF-related matrix-associated actin-dependent r... SMARCD2 0.611 SWI/SNF-related matrix-associated actin-dependent r... COL2A1 0.029 collagen, type II, alpha 1 isoform 1 precursor [Hom... COL2A1 0.029 collagen, type II, alpha 1 isoform 2 precursor [Hom... MED25 0.028 mediator complex subunit 25 KAT2B 0.025 K(lysine) acetyltransferase 2B COL3A1 0.025 collagen type III alpha 1 preproprotein COL1A2 0.024 alpha 2 type I collagen COL11A2 0.024 collagen, type XI, alpha 2 isoform 2 preproprotein ... COL11A2 0.024 collagen, type XI, alpha 2 isoform 3 preproprotein ... COL11A2 0.024 collagen, type XI, alpha 2 isoform 1 preproprotein ... COL11A1 0.024 alpha 1 type XI collagen isoform B preproprotein [Ho... COL11A1 0.024 alpha 1 type XI collagen isoform C preproprotein [Ho... COL11A1 0.024 alpha 1 type XI collagen isoform A preproprotein [Ho... COL18A1 0.024 alpha 1 type XVIII collagen isoform 3 precursor [Ho... COL18A1 0.024 alpha 1 type XVIII collagen isoform 2 precursor [Ho... COL18A1 0.024 alpha 1 type XVIII collagen isoform 1 precursor [Ho... SNRPB 0.024 small nuclear ribonucleoprotein polypeptide B/B' iso... SNRPB 0.024 small nuclear ribonucleoprotein polypeptide B/B' isof... KDM1 0.024 amine oxidase (flavin containing) domain 2 isoform b... SCARA3 0.023 scavenger receptor class A, member 3 isoform 1 [Homo... COL1A1 0.023 alpha 1 type I collagen preproprotein SMARCA4 0.023 SWI/SNF-related matrix-associated actin-dependent r... SMARCA4 0.023 SWI/SNF-related matrix-associated actin-dependent r... SMARCA4 0.023 SWI/SNF-related matrix-associated actin-dependent r... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.