Guide to the Human Genome
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Name: SGK269 Sequence: fasta or formatted (1746aa) NCBI GI: 148368962
Description:

NKF3 kinase family member

Referenced in:

Additional Serine / Threonine Protein Kinases

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.2        108           2
 C cysteine            2.1         36           2
 D aspartate           5.2         91           2
 E glutamate           7.7        134           3
 F phenylalanine       2.5         43           2
 G glycine             4.9         85           2
 H histidine           2.2         39           2
 I isoleucine          4.8         84           3
 K lysine              7.2        126           2
 L leucine             7.1        124           4
 M methionine          1.5         27           1
 N asparagine          4.8         83           4
 P proline             8.2        144           4
 Q glutamine           4.9         85           2
 R arginine            5.0         88           3
 S serine             11.5        201           4
 T threonine           6.1        106           2
 V valine              5.0         88           3
 W tryptophan          0.8         14           1
 Y tyrosine            2.3         40           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   NKF3 kinase family member 
PRAGMIN               0.112   pragmin 
C19orf35              0.021   hypothetical protein LOC374872 
LOC100294236          0.011   PREDICTED: similar to diffuse panbronchiolitis crit...
PINK1                 0.010   PTEN induced putative kinase 1 precursor 
MUC17                 0.010   mucin 17 
PRG4                  0.010   proteoglycan 4 isoform D 
PRG4                  0.010   proteoglycan 4 isoform C 
PRG4                  0.010   proteoglycan 4 isoform B 
PRG4                  0.010   proteoglycan 4 isoform A 
MUC16                 0.008   mucin 16 
MUC2                  0.008   mucin 2 precursor 
AFF1                  0.008   myeloid/lymphoid or mixed-lineage leukemia trithorax ...
POLR2A                0.008   DNA-directed RNA polymerase II A 
KIAA1522              0.008   hypothetical protein LOC57648 
ULK3                  0.008   unc-51-like kinase 3 
NACA                  0.008   nascent polypeptide-associated complex alpha subuni...
TTN                   0.007   titin isoform N2-A 
MUC5AC                0.007   mucin 5AC 
MUC4                  0.007   mucin 4 isoform a 
WNK2                  0.007   WNK lysine deficient protein kinase 2 
LDB3                  0.007   LIM domain binding 3 isoform 1 
MAP7                  0.007   microtubule-associated protein 7 
MYOCD                 0.007   myocardin isoform 2 
SORBS2                0.007   sorbin and SH3 domain containing 2 isoform 6 
FLJ22184              0.007   PREDICTED: hypothetical protein FLJ22184 
BRD4                  0.007   bromodomain-containing protein 4 isoform long 
MUC5B                 0.007   mucin 5, subtype B, tracheobronchial 
LOC100134138          0.007   PREDICTED: similar to mucin, partial 
MUC6                  0.007   mucin 6, gastric 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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