Guide to the Human Genome
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Name: C19orf35 Sequence: fasta or formatted (473aa) NCBI GI: 38348368
Description:

hypothetical protein LOC374872

Referenced in:

Additional Serine / Threonine Protein Kinases

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            12.5         59           2
 C cysteine            2.1         10           2
 D aspartate           2.3         11           1
 E glutamate           5.5         26           2
 F phenylalanine       1.5          7           1
 G glycine             8.2         39           2
 H histidine           2.7         13           1
 I isoleucine          1.1          5           1
 K lysine              1.5          7           2
 L leucine            17.1         81           4
 M methionine          0.6          3           1
 N asparagine          1.1          5           1
 P proline            12.9         61           3
 Q glutamine           3.8         18           1
 R arginine            7.6         36           2
 S serine              6.6         31           2
 T threonine           5.1         24           2
 V valine              4.2         20           2
 W tryptophan          2.5         12           1
 Y tyrosine            1.1          5           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hypothetical protein LOC374872 
PRAGMIN               0.079   pragmin 
SGK269                0.076   NKF3 kinase family member 
COL18A1               0.018   alpha 1 type XVIII collagen isoform 3 precursor [Ho...
LOC100133161          0.016   PREDICTED: hypothetical protein 
SBK2                  0.016   SH3-binding domain kinase family, member 2 
FLJ22184              0.015   PREDICTED: hypothetical protein FLJ22184 
FLJ22184              0.014   PREDICTED: hypothetical protein LOC80164 
LOC100132062          0.014   PREDICTED: hypothetical protein 
LOC100132287          0.014   PREDICTED: hypothetical protein 
LOC100132062          0.014   PREDICTED: hypothetical protein 
FLJ22184              0.013   PREDICTED: hypothetical protein FLJ22184 
COL18A1               0.013   alpha 1 type XVIII collagen isoform 1 precursor [Ho...
ARHGAP17              0.013   nadrin isoform 1 
ARHGAP17              0.013   nadrin isoform 2 
CAMK1G                0.013   calcium/calmodulin-dependent protein kinase IG [Homo...
WASF1                 0.012   Wiskott-Aldrich syndrome protein family member 1 [Ho...
WASF1                 0.012   Wiskott-Aldrich syndrome protein family member 1 [Ho...
WASF1                 0.012   Wiskott-Aldrich syndrome protein family member 1 [Ho...
WASF1                 0.012   Wiskott-Aldrich syndrome protein family member 1 [Hom...
DIAPH1                0.012   diaphanous 1 isoform 2 
DIAPH1                0.012   diaphanous 1 isoform 1 
LOC100291797          0.012   PREDICTED: hypothetical protein XP_002345651 
LOC100291443          0.012   PREDICTED: hypothetical protein XP_002346504 
LOC100289394          0.012   PREDICTED: hypothetical protein XP_002342316 
SPEN                  0.012   spen homolog, transcriptional regulator 
MLL2                  0.012   myeloid/lymphoid or mixed-lineage leukemia 2 
NACA                  0.012   nascent polypeptide-associated complex alpha subuni...
TYRO3                 0.011   TYRO3 protein tyrosine kinase 
NACAD                 0.011   NAC alpha domain containing 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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