Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: PINK1 Sequence: fasta or formatted (581aa) NCBI GI: 14165272
Description:

PTEN induced putative kinase 1 precursor

Referenced in:

Additional Serine / Threonine Protein Kinases

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            11.5         67           2
 C cysteine            2.8         16           2
 D aspartate           2.8         16           1
 E glutamate           5.2         30           2
 F phenylalanine       2.8         16           2
 G glycine             9.8         57           2
 H histidine           1.4          8           1
 I isoleucine          3.1         18           2
 K lysine              3.6         21           1
 L leucine            13.9         81           3
 M methionine          2.1         12           2
 N asparagine          2.4         14           1
 P proline             7.4         43           2
 Q glutamine           4.8         28           2
 R arginine            7.7         45           2
 S serine              5.7         33           3
 T threonine           3.3         19           1
 V valine              6.0         35           2
 W tryptophan          1.5          9           1
 Y tyrosine            2.2         13           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PTEN induced putative kinase 1 precursor 
DMPK                  0.039   myotonic dystrophy protein kinase isoform 1 
DMPK                  0.039   myotonic dystrophy protein kinase isoform 4 
DMPK                  0.039   myotonic dystrophy protein kinase isoform 3 
DMPK                  0.039   myotonic dystrophy protein kinase isoform 2 
SGK269                0.031   NKF3 kinase family member 
CAMK1                 0.031   calcium/calmodulin-dependent protein kinase I 
CAMK2A                0.031   calcium/calmodulin-dependent protein kinase II alpha...
CAMK2A                0.031   calcium/calmodulin-dependent protein kinase II alpha...
CDC42BPG              0.030   CDC42 binding protein kinase gamma (DMPK-like) [Hom...
CAMK2D                0.030   calcium/calmodulin-dependent protein kinase II delt...
CAMK2D                0.030   calcium/calmodulin-dependent protein kinase II delta...
CAMK2D                0.030   calcium/calmodulin-dependent protein kinase II delt...
CAMK2D                0.030   calcium/calmodulin-dependent protein kinase II delta...
CAMK2D                0.030   calcium/calmodulin-dependent protein kinase II delta...
CAMK2D                0.030   calcium/calmodulin-dependent protein kinase II delta...
CAMK2G                0.029   calcium/calmodulin-dependent protein kinase II gamma...
CAMK2G                0.029   calcium/calmodulin-dependent protein kinase II gamma...
CAMK2G                0.029   calcium/calmodulin-dependent protein kinase II gamma...
CAMK2G                0.029   calcium/calmodulin-dependent protein kinase II gamma...
CAMK2G                0.029   calcium/calmodulin-dependent protein kinase II gamma...
CAMK1G                0.029   calcium/calmodulin-dependent protein kinase IG [Homo...
YSK4                  0.028   Yeast Sps1/Ste20-related kinase 4 isoform 1 
YSK4                  0.028   Yeast Sps1/Ste20-related kinase 4 isoform 2 
SGK1                  0.028   serum/glucocorticoid regulated kinase 1 isoform 1 [H...
SGK1                  0.028   serum/glucocorticoid regulated kinase 1 isoform 4 [...
SGK1                  0.028   serum/glucocorticoid regulated kinase 1 isoform 3 [...
SGK1                  0.028   serum/glucocorticoid regulated kinase 1 isoform 2 [...
RPS6KA3               0.028   ribosomal protein S6 kinase, 90kDa, polypeptide 3 [Ho...
NEK8                  0.028   NIMA-related kinase 8 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press