MYOCD 16472

Name: MYOCD	Sequence: fasta or formatted (938aa)		NCBI GI: 23957692
Description: myocardin isoform 2		Referenced in: Muscle Platelets and Megakaryocytes
Other entries for this name: alt prot [986aa] myocardin isoform 1 alt prot [684aa] myocardin isoform 3
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.1 57 2 C cysteine 1.2 11 1 D aspartate 5.5 52 2 E glutamate 5.2 49 2 F phenylalanine 3.4 32 1 G glycine 4.8 45 2 H histidine 2.7 25 1 I isoleucine 3.0 28 2 K lysine 6.0 56 2 L leucine 9.8 92 2 M methionine 2.0 19 1 N asparagine 4.3 40 2 P proline 9.4 88 3 Q glutamine 7.8 73 7 R arginine 3.6 34 2 S serine 14.9 140 4 T threonine 4.6 43 2 V valine 4.5 42 1 W tryptophan 0.4 4 1 Y tyrosine 0.9 8 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 myocardin isoform 2 MYOCD 0.988 myocardin isoform 1 MYOCD 0.661 myocardin isoform 3 MKL2 0.261 megakaryoblastic leukemia 2 protein MKL1 0.230 megakaryoblastic leukemia 1 protein MAMSTR 0.021 MEF2 activating motif and SAP domain containing tra... MAMSTR 0.017 MEF2 activating motif and SAP domain containing tran... EP300 0.015 E1A binding protein p300 SGK269 0.014 NKF3 kinase family member NCOA6 0.012 nuclear receptor coactivator 6 BAT2 0.011 HLA-B associated transcript-2 LOC643446 0.010 PREDICTED: similar to ribonucleic acid binding prot... LOC643446 0.010 PREDICTED: similar to ribonucleic acid binding prot... LOC643446 0.010 PREDICTED: similar to ribonucleic acid binding prot... LOC643446 0.010 PREDICTED: similar to ribonucleic acid binding prote... LOC643446 0.010 PREDICTED: similar to ribonucleic acid binding prot... LOC643446 0.010 PREDICTED: similar to ribonucleic acid binding prot... MAML1 0.010 mastermind-like 1 POU6F2 0.010 POU domain, class 6, transcription factor 2 RNPS1 0.010 RNA-binding protein S1, serine-rich domain RNPS1 0.010 RNA-binding protein S1, serine-rich domain ZMYND8 0.010 zinc finger, MYND-type containing 8 isoform c ZMYND8 0.010 zinc finger, MYND-type containing 8 isoform a ZMYND8 0.010 zinc finger, MYND-type containing 8 isoform b MUC12 0.009 PREDICTED: mucin 12 MUC12 0.009 PREDICTED: mucin 12 LOC100133714 0.009 PREDICTED: similar to Mucin-12, partial MAP4K4 0.009 mitogen-activated protein kinase kinase kinase kinas... KIF26B 0.009 kinesin family member 26B MUC17 0.008 mucin 17 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.