Guide to the Human Genome
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Name: LAT2 Sequence: fasta or formatted (243aa) NCBI GI: 14702182
Description:

linker for activation of T cells family member 2

Referenced in:

B cells
T cells

Other entries for this name:
alt mRNA [243aa] linker for activation of T cells family member 2
alt mRNA [243aa] linker for activation of T cells family member 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.2         20           2
 C cysteine            2.1          5           1
 D aspartate           5.8         14           3
 E glutamate           9.5         23           2
 F phenylalanine       1.6          4           1
 G glycine             9.1         22           2
 H histidine           0.8          2           1
 I isoleucine          2.5          6           1
 K lysine              4.1         10           1
 L leucine             8.6         21           2
 M methionine          1.6          4           1
 N asparagine          2.5          6           1
 P proline             7.0         17           2
 Q glutamine           5.8         14           2
 R arginine            5.8         14           1
 S serine             11.5         28           2
 T threonine           4.1         10           2
 V valine              3.7          9           1
 W tryptophan          1.6          4           1
 Y tyrosine            4.1         10           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   linker for activation of T cells family member 2 [Ho... 
LAT2                  1.000   linker for activation of T cells family member 2 [H...
LAT2                  1.000   linker for activation of T cells family member 2 [Ho...
CD19                  0.021   CD19 antigen 
HNRNPUL2              0.017   heterogeneous nuclear ribonucleoprotein U-like 2 [H...
PNMAL2                0.015   PNMA-like 2 
NES                   0.015   nestin 
MBD1                  0.015   methyl-CpG binding domain protein 1 isoform 2 
PRKCSH                0.015   protein kinase C substrate 80K-H isoform 2 
PCDHA3                0.013   protocadherin alpha 3 isoform 1 precursor 
RBM6                  0.013   RNA binding motif protein 6 
ASPH                  0.011   aspartate beta-hydroxylase isoform c 
ASPH                  0.011   aspartate beta-hydroxylase isoform b 
ASPH                  0.011   aspartate beta-hydroxylase isoform a 
SOX12                 0.011   SRY (sex determining region Y)-box 12 
FOXA1                 0.011   forkhead box A1 
ZC3H14                0.011   zinc finger CCCH-type containing 14 isoform 3 
ZC3H14                0.011   zinc finger CCCH-type containing 14 isoform 6 [Homo...
ZC3H14                0.011   zinc finger CCCH-type containing 14 isoform 5 [Homo...
ZC3H14                0.011   zinc finger CCCH-type containing 14 isoform 2 
ZC3H14                0.011   zinc finger CCCH-type containing 14 isoform 1 
BRD8                  0.011   bromodomain containing 8 isoform 3 
BRD8                  0.011   bromodomain containing 8 isoform 2 
BRD8                  0.011   bromodomain containing 8 isoform 1 
CCDC96                0.011   coiled-coil domain containing 96 
CLEC17A               0.011   C-type lectin domain family 17, member A 
MBD1                  0.011   methyl-CpG binding domain protein 1 isoform 4 
MBD1                  0.011   methyl-CpG binding domain protein 1 isoform PCM1 [Ho...
MBD1                  0.011   methyl-CpG binding domain protein 1 isoform 1 
MBD1                  0.011   methyl-CpG binding domain protein 1 isoform 3 [Homo...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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