Guide to the Human Genome
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Name: ASPH Sequence: fasta or formatted (758aa) NCBI GI: 14589866
Description:

aspartate beta-hydroxylase isoform a

Referenced in:

Additional Protein Modifications

Other entries for this name:
alt prot [313aa] aspartate beta-hydroxylase isoform c
alt prot [210aa] aspartate beta-hydroxylase isoform d
alt prot [299aa] aspartate beta-hydroxylase isoform b
alt prot [225aa] aspartate beta-hydroxylase isoform e
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.7         43           2
 C cysteine            1.1          8           1
 D aspartate           6.9         52           2
 E glutamate          11.7         89           2
 F phenylalanine       3.2         24           2
 G glycine             7.1         54           2
 H histidine           2.9         22           2
 I isoleucine          3.3         25           1
 K lysine              7.1         54           4
 L leucine             8.2         62           2
 M methionine          1.6         12           2
 N asparagine          3.6         27           1
 P proline             5.5         42           2
 Q glutamine           4.7         36           2
 R arginine            5.0         38           2
 S serine              6.1         46           4
 T threonine           5.0         38           2
 V valine              7.0         53           2
 W tryptophan          1.8         14           2
 Y tyrosine            2.5         19           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   aspartate beta-hydroxylase isoform a 
ASPH                  0.399   aspartate beta-hydroxylase isoform c 
ASPH                  0.351   aspartate beta-hydroxylase isoform b 
ASPH                  0.092   aspartate beta-hydroxylase isoform d 
ASPH                  0.085   aspartate beta-hydroxylase isoform e 
ASPHD2                0.051   aspartate beta-hydroxylase domain containing 2 [Hom...
ASPHD1                0.039   aspartate beta-hydroxylase domain containing 1 [Homo...
MYST3                 0.020   MYST histone acetyltransferase (monocytic leukemia)...
MYST3                 0.020   MYST histone acetyltransferase (monocytic leukemia)...
MYST3                 0.020   MYST histone acetyltransferase (monocytic leukemia)...
RP1L1                 0.020   retinitis pigmentosa 1-like 1 
TTN                   0.016   titin isoform N2-A 
TCHH                  0.016   trichohyalin 
MYT1                  0.016   myelin transcription factor 1 
MYST4                 0.016   MYST histone acetyltransferase (monocytic leukemia)...
EIF5B                 0.016   eukaryotic translation initiation factor 5B 
LOC283767             0.016   golgi autoantigen, golgin subfamily a-like 
CEP152                0.016   centrosomal protein 152kDa 
LOC727832             0.015   golgi autoantigen, golgin subfamily a-like 
NEFH                  0.014   neurofilament, heavy polypeptide 200kDa 
TRDN                  0.014   triadin 
NEFM                  0.014   neurofilament, medium polypeptide 150kDa isoform 1 ...
NEFM                  0.014   neurofilament, medium polypeptide 150kDa isoform 2 ...
RPGR                  0.014   retinitis pigmentosa GTPase regulator isoform C [Hom...
CALD1                 0.014   caldesmon 1 isoform 1 
WDR87                 0.013   NYD-SP11 protein 
SETD1B                0.013   SET domain containing 1B 
TMTC1                 0.012   transmembrane and tetratricopeptide repeat containin...
CDC2L2                0.012   cell division cycle 2-like 2 isoform 4 
CDC2L2                0.012   cell division cycle 2-like 2 isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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