Guide to the Human Genome
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Name: ASPH Sequence: fasta or formatted (313aa) NCBI GI: 14589860
Description:

aspartate beta-hydroxylase isoform c

Referenced in:

Additional Protein Modifications

Other entries for this name:
alt prot [210aa] aspartate beta-hydroxylase isoform d
alt prot [299aa] aspartate beta-hydroxylase isoform b
alt prot [758aa] aspartate beta-hydroxylase isoform a
alt prot [225aa] aspartate beta-hydroxylase isoform e
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.1         16           1
 C cysteine            0.3          1           1
 D aspartate           8.6         27           2
 E glutamate          16.9         53           2
 F phenylalanine       2.6          8           2
 G glycine             7.0         22           2
 H histidine           3.5         11           2
 I isoleucine          2.6          8           1
 K lysine              2.9          9           1
 L leucine             5.1         16           2
 M methionine          2.2          7           2
 N asparagine          2.6          8           1
 P proline             6.4         20           2
 Q glutamine           5.4         17           2
 R arginine            2.2          7           2
 S serine              8.6         27           4
 T threonine           5.4         17           1
 V valine              9.6         30           2
 W tryptophan          1.0          3           1
 Y tyrosine            1.9          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   aspartate beta-hydroxylase isoform c 
ASPH                  0.997   aspartate beta-hydroxylase isoform a 
ASPH                  0.882   aspartate beta-hydroxylase isoform b 
ASPH                  0.231   aspartate beta-hydroxylase isoform d 
ASPH                  0.213   aspartate beta-hydroxylase isoform e 
MYST3                 0.044   MYST histone acetyltransferase (monocytic leukemia)...
MYST3                 0.044   MYST histone acetyltransferase (monocytic leukemia)...
MYST3                 0.044   MYST histone acetyltransferase (monocytic leukemia)...
RP1L1                 0.041   retinitis pigmentosa 1-like 1 
MYT1                  0.039   myelin transcription factor 1 
WDR87                 0.033   NYD-SP11 protein 
CDC2L2                0.031   cell division cycle 2-like 2 isoform 4 
CDC2L2                0.031   cell division cycle 2-like 2 isoform 1 
TTN                   0.029   titin isoform N2-A 
CDC2L1                0.029   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.029   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.029   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.029   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.029   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.029   cell division cycle 2-like 1 (PITSLRE proteins) isof...
FGD5                  0.029   FYVE, RhoGEF and PH domain containing 5 
SETD1B                0.028   SET domain containing 1B 
NCL                   0.028   nucleolin 
PELP1                 0.028   proline, glutamic acid and leucine rich protein 1 [...
TNRC18                0.028   trinucleotide repeat containing 18 
MYST4                 0.028   MYST histone acetyltransferase (monocytic leukemia)...
EIF5B                 0.028   eukaryotic translation initiation factor 5B 
HUWE1                 0.026   HECT, UBA and WWE domain containing 1 
TRDN                  0.026   triadin 
GOLIM4                0.025   golgi integral membrane protein 4 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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